Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 9.2e-165 583.6 310 100.0
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 7.1e-149 530.8 315 92.1
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.2e-92 344.0 309 64.4
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.4e-85 320.5 211 80.6
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.7e-84 316.2 288 61.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.9e-83 312.4 300 61.3
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.2e-83 312.0 243 71.6
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.0e-82 310.1 227 73.6
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 9.7e-82 307.8 280 66.8
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 3.1e-80 302.8 265 65.3
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.0e-79 300.1 228 71.5
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 1.7e-78 297.0 226 70.4
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.2e-78 296.6 221 72.9
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 3.8e-78 295.8 276 62.3
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 6.5e-78 295.0 221 69.2
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 8.5e-78 294.7 193 83.4
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.1e-77 294.3 219 73.1
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.5e-77 293.9 307 59.3
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.5e-77 293.1 218 69.3
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 3.2e-77 292.7 307 59.3
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 3.2e-77 292.7 207 78.3
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.2e-77 292.4 284 60.9
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.2e-77 292.4 284 60.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 5.5e-77 292.0 306 56.2
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 5.5e-77 292.0 283 59.7
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 9.4e-77 291.2 279 62.0
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 9.4e-77 291.2 281 60.5
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.6e-76 290.4 209 74.6
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.6e-76 290.4 208 74.5
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.7e-76 289.7 236 67.8
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 4.7e-76 288.9 273 65.2
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 4.7e-76 288.9 288 59.4
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 6.1e-76 288.5 292 58.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 8.0e-76 288.1 208 75.0
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 8.0e-76 288.1 229 70.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 8.0e-76 288.1 292 59.2
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.3e-75 286.6 274 63.9
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.3e-75 286.6 236 66.9
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 2.3e-75 286.6 208 76.0
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 3.0e-75 286.2 211 72.0
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 1.2e-74 284.3 217 72.4
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.6e-74 283.1 270 63.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 3.3e-74 282.7 273 62.6
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 5.7e-74 282.0 232 65.5
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 7.5e-74 281.6 208 74.0
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.8e-73 279.6 268 58.6
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.7e-73 279.3 293 57.7
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 4.8e-73 278.9 284 57.0
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 4.8e-73 278.9 218 67.9
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.8e-73 278.9 287 57.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.1e-72 276.2 289 57.1
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 9.1e-72 274.6 278 57.2
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.2e-71 274.2 244 63.1
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 1.6e-71 273.9 237 62.4
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 4.5e-71 272.3 213 68.1
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 5.9e-71 271.9 211 68.7
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.9e-70 269.6 201 72.6
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.8e-70 269.2 242 64.5
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 5.0e-70 268.9 297 57.6
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 5.0e-70 268.9 175 82.3
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 5.0e-70 268.9 300 54.7
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 2.5e-69 266.5 227 64.8
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.5e-69 266.5 212 66.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 4.2e-69 265.8 221 64.3
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.2e-69 265.8 209 70.3
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 4.2e-69 265.8 209 70.3
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 5.5e-69 265.4 242 62.8
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.0e-67 259.2 202 66.8
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 5.2e-67 258.8 341 51.6
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.8e-67 258.1 290 57.6
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 1.2e-66 257.7 209 68.9
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.5e-66 255.0 282 56.0
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 2.8e-65 253.1 208 64.4
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.8e-65 253.1 257 59.1
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.8e-65 252.3 290 56.6
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.1e-64 248.1 217 65.0
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.2e-63 247.7 189 72.5
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.6e-63 247.3 197 67.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 3.5e-63 246.1 300 52.0
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.5e-63 245.7 204 61.3
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 7.7e-63 245.0 202 62.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.3e-62 243.4 180 71.7
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 5.0e-62 242.3 168 76.2
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 6.5e-62 241.9 235 57.4
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 8.6e-62 241.5 176 73.3
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.1e-61 241.1 197 62.4
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.5e-61 240.7 235 57.4
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.1e-60 236.9 235 57.4
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 2.8e-60 236.5 265 55.8
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.8e-60 236.5 265 55.8
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 1.7e-57 227.3 233 57.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 2.2e-57 226.9 318 50.6
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 7.8e-55 218.4 176 69.9
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 7.8e-55 218.4 208 60.6
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 2.9e-54 216.5 136 83.1
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.9e-53 213.8 151 74.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.1e-52 210.3 171 67.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 3.6e-52 209.5 141 77.3
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.6e-50 203.4 312 46.5
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.2e-47 194.5 196 58.7
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.7e-47 193.4 193 59.1
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 3.5e-47 193.0 249 41.4
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 2.3e-46 190.3 249 50.2
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 2.1e-44 183.7 159 64.2
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 3.7e-41 172.9 114 78.1
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 8.3e-41 171.8 160 66.9
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.1e-40 169.5 137 63.5
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.0e-39 165.6 228 39.5
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.5e-37 160.2 116 72.4
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 8.9e-35 151.8 253 45.1
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 9.9e-34 148.3 141 61.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 3.2e-32 143.3 223 46.2
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.2e-26 124.8 116 61.2
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.2e-24 116.7 131 53.4
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 3.5e-23 113.2 199 36.7
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.5e-18 97.8 178 33.7
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 1.7e-17 94.4 80 63.8
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 2.4e-16 90.5 194 32.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 3.3e-13 80.1 69 66.7
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.4e-11 74.7 90 48.9
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.2e-10 71.6 53 66.0
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 3.2e-08 63.5 66 53.0


User provided reference genes

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