Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 0.0e+00 1654.4 936 100.0
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 0.0e+00 1588.9 936 95.0
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.4e-272 943.3 946 60.5
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 9.6e-266 920.6 968 58.1
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 9.3e-261 904.0 958 56.7
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 3.9e-259 898.7 948 57.2
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 6.9e-256 887.9 930 57.8
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 5.8e-255 884.8 1075 52.0
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 2.2e-254 882.9 954 56.7
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 8.7e-251 870.9 924 54.3
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 8.1e-249 864.4 953 57.4
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.4e-248 863.6 919 56.0
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.4e-248 862.8 957 55.5
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.1e-248 862.4 960 56.6
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.6e-247 859.4 952 54.8
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 5.8e-247 858.2 954 54.9
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 3.8e-246 855.5 955 55.6
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 4.6e-244 848.6 950 55.4
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 1.9e-242 843.2 918 55.8
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 3.4e-239 832.4 965 56.4
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.8e-238 828.9 927 52.3
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.6e-236 823.5 959 54.4
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 4.6e-236 822.0 946 54.3
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 4.6e-236 822.0 978 53.6
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 2.3e-235 819.7 1005 52.4
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.1e-234 817.4 950 53.6
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.5e-234 817.0 928 53.8
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.5e-234 817.0 927 53.2
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 2.5e-234 816.2 959 53.9
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 3.3e-234 815.8 931 53.7
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.3e-234 815.5 941 54.4
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 5.7e-234 815.1 945 52.1
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 7.4e-234 814.7 951 55.3
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 9.0e-232 807.7 928 50.6
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 2.0e-231 806.6 928 54.1
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 3.4e-231 805.8 939 53.4
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 7.6e-231 804.7 889 57.0
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.9e-230 802.7 963 51.2
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 4.2e-229 798.9 923 55.4
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 5.5e-229 798.5 946 53.5
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 7.2e-229 798.1 955 50.8
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 7.2e-229 798.1 971 52.1
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 1.8e-227 793.5 962 53.6
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 8.7e-227 791.2 969 53.0
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 1.5e-226 790.4 953 52.8
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 5.7e-226 788.5 974 53.6
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.8e-225 786.2 966 52.3
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 4.8e-225 785.4 983 52.1
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.4e-224 783.9 984 51.1
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 9.1e-224 781.2 932 51.3
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.2e-223 780.8 869 53.5
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.0e-223 780.0 926 54.4
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 4.5e-223 778.9 941 53.8
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 4.5e-223 778.9 947 51.7
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 5.9e-223 778.5 955 54.3
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 7.7e-223 778.1 941 51.8
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 1.3e-222 777.3 939 53.1
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 6.5e-222 775.0 966 52.7
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 1.1e-221 774.2 1019 51.4
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 5.5e-221 771.9 941 50.5
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 9.4e-221 771.2 955 53.2
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 1.6e-220 770.4 956 51.3
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 2.7e-220 769.6 927 53.0
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 3.6e-220 769.2 937 50.2
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 3.6e-220 769.2 945 52.1
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 6.1e-220 768.5 956 52.4
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 7.9e-220 768.1 937 51.2
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 7.4e-218 761.5 946 52.6
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.3e-217 760.8 934 49.3
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.7e-217 760.4 925 51.9
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 2.2e-217 760.0 948 50.7
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 6.3e-217 758.4 937 52.4
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 8.2e-217 758.1 844 54.3
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 3.1e-216 756.1 913 50.7
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 4.1e-216 755.7 941 51.4
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 9.1e-216 754.6 939 51.7
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.5e-215 753.8 941 50.4
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 4.5e-215 752.3 961 49.4
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 1.3e-214 750.7 954 51.4
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.9e-214 749.6 942 52.2
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.2e-213 745.7 952 51.1
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 2.7e-212 743.0 960 51.6
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.9e-212 741.5 952 50.3
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 1.7e-209 733.8 991 48.8
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.4e-208 730.7 952 48.1
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 1.6e-207 727.2 959 50.3
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 5.9e-207 725.3 974 50.2
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 7.2e-205 718.4 876 50.5
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 9.4e-205 718.0 950 50.8
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 8.0e-204 714.9 930 48.4
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 3.7e-193 679.5 972 47.7
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.7e-191 673.3 953 48.6
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.8e-171 607.4 934 44.9
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 1.1e-168 598.2 832 49.3
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.2e-167 594.7 966 41.8
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 6.0e-167 592.4 966 42.5
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 4.9e-161 572.8 960 42.0
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.3e-140 505.0 636 54.1
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 4.8e-140 503.1 442 57.5
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 6.9e-131 472.6 692 46.4
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 9.9e-130 468.8 394 61.4
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.0e-118 432.2 586 47.3
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 3.4e-114 417.2 515 55.9
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.4e-110 405.2 584 44.5
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 2.2e-105 387.9 907 36.8
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 4.5e-98 363.6 482 48.5
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 3.5e-82 310.8 594 39.6
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.6e-73 280.0 264 58.7
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 1.1e-72 279.3 309 57.6
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.6e-69 268.1 327 52.9
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 7.5e-69 266.5 316 58.2
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.6e-63 248.8 395 45.6
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 6.1e-63 246.9 261 52.1
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 1.7e-60 238.8 955 27.7
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 2.4e-59 235.0 331 48.6
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.5e-56 224.9 262 47.3
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 4.7e-55 220.7 380 44.2
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.3e-48 196.8 194 53.6
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 5.2e-46 190.7 276 48.2
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.3e-44 186.0 1138 25.7
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 1.3e-28 132.9 681 26.9
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 5.4e-27 127.5 770 24.2
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 9.3e-27 126.7 123 52.8
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-26 126.3 131 49.6
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 2.7e-26 125.2 332 41.6
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.5e-24 118.6 83 69.9
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 2.1e-23 115.5 98 57.1
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 2.8e-23 115.2 339 34.2
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.1e-22 113.2 122 52.5
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.4e-22 112.8 83 67.5
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 3.4e-21 108.2 113 52.2
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 1.3e-20 106.3 111 52.3
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 1.4e-19 102.8 245 34.7
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 1.8e-17 95.9 89 59.6
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.5e-16 92.8 89 58.4
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.7e-15 88.2 69 69.6
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.0e-13 82.4 116 47.4
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 3.4e-13 81.6 151 36.4
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.9e-12 78.6 52 71.2
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 5.5e-11 74.3 81 54.3
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.5e-11 74.3 121 43.8
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.2e-10 73.2 57 66.7
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.6e-10 72.8 52 69.2
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 3.5e-10 71.6 207 28.5
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 3.7e-07 61.6 70 55.7
ATR0735G001 Amborella trichopoda HOM05D004844 ORTHO05D006036 3.1e-06 58.5 80 43.8


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