Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.7e-157 559.3 279 100.0
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 5.6e-137 491.1 332 78.3
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 4.5e-86 322.0 327 50.8
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.1e-84 317.4 325 51.4
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.4e-84 317.0 327 50.2
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.2e-83 313.9 332 50.3
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 3.9e-82 308.9 334 50.3
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.3e-81 305.4 328 49.7
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.3e-81 305.4 328 49.7
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 5.3e-79 298.5 324 48.5
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 3.8e-77 292.4 332 47.0
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.8e-77 292.4 332 45.8
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 2.5e-76 289.7 325 47.1
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 7.2e-76 288.1 332 46.4
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 7.2e-76 288.1 322 47.8
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.7e-75 286.2 331 46.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 3.6e-75 285.8 331 46.8
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 4.6e-75 285.4 330 47.9
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.6e-75 285.4 326 49.4
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 4.6e-75 285.4 327 48.0
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.6e-75 285.4 318 47.2
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 7.9e-75 284.6 335 46.6
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 7.9e-75 284.6 327 45.6
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.4e-74 283.9 331 45.9
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 2.3e-74 283.1 332 47.6
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.3e-74 283.1 341 45.5
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.0e-74 282.7 332 45.5
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 3.0e-74 282.7 334 47.9
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 5.1e-74 282.0 329 45.9
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.1e-73 280.8 326 46.9
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.1e-73 280.8 330 47.6
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 1.5e-73 280.4 327 46.2
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 2.6e-73 279.6 322 46.9
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 5.7e-73 278.5 325 47.1
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.3e-72 277.3 331 46.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.7e-72 276.9 333 44.4
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 2.8e-72 276.2 326 46.9
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.8e-72 276.2 324 43.5
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 4.8e-72 275.4 330 45.8
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 4.8e-72 275.4 331 46.5
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.8e-71 273.5 324 43.2
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 2.4e-71 273.1 331 45.3
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.4e-71 273.1 330 43.9
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 3.1e-71 272.7 317 45.7
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.1e-71 272.3 324 42.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 5.3e-71 271.9 322 42.9
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 9.1e-71 271.2 317 47.3
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.4e-70 269.2 322 42.5
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.5e-70 268.9 334 47.0
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 7.7e-70 268.1 321 45.2
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 7.7e-70 268.1 331 45.6
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-69 267.3 334 46.7
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.7e-69 266.9 332 45.5
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.2e-69 266.5 315 45.7
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 8.5e-69 264.6 334 44.3
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.4e-68 263.8 329 43.2
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 3.2e-68 262.7 317 45.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 7.2e-68 261.5 320 46.9
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.6e-67 260.4 331 44.1
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.1e-67 260.0 331 42.6
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 4.7e-67 258.8 330 41.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.7e-67 258.8 319 45.5
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.0e-66 257.7 334 45.5
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 3.9e-66 255.8 302 47.0
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 6.7e-66 255.0 324 44.8
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 8.8e-66 254.6 283 48.4
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 4.8e-64 248.8 321 44.9
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.1e-63 247.7 322 45.3
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.4e-63 247.3 347 40.6
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 2.4e-63 246.5 331 42.3
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 2.4e-63 246.5 331 43.5
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.4e-63 246.5 323 44.3
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 2.4e-63 246.5 278 47.1
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 4.1e-63 245.7 328 41.2
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 9.1e-63 244.6 329 43.2
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.7e-62 241.5 330 40.3
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 1.3e-61 240.7 299 46.2
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.3e-61 240.7 204 60.3
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 7.2e-60 235.0 332 39.8
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.7e-59 232.3 325 42.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.4e-58 230.7 335 39.7
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 4.0e-58 229.2 317 42.3
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.2e-56 223.4 321 39.9
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.2e-56 223.4 336 39.9
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 5.3e-55 218.8 332 40.7
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 4.5e-54 215.7 314 39.5
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 5.9e-54 215.3 315 38.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 7.7e-54 214.9 350 38.9
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.9e-53 213.0 324 38.0
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 6.5e-53 211.8 316 38.3
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 6.5e-53 211.8 365 37.0
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 8.5e-53 211.5 314 39.8
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.5e-52 209.9 315 38.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.2e-51 207.6 317 38.5
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.2e-51 207.6 317 38.5
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 8.0e-51 204.9 273 45.4
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.0e-50 204.5 340 35.0
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.5e-49 200.7 185 56.8
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 4.4e-49 199.1 329 39.2
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 3.5e-46 189.5 333 35.7
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 6.5e-45 185.3 266 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.2e-43 181.0 328 36.0
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 7.5e-41 171.8 182 49.5
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.8e-40 169.9 385 30.4
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.7e-38 163.3 380 30.5
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 6.6e-37 158.7 139 54.7
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 8.0e-35 151.8 133 57.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.4e-31 140.2 133 51.1
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.7e-30 136.7 128 54.7
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 2.2e-24 117.1 317 28.1
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 6.4e-24 115.5 123 51.2
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.6e-19 100.9 87 54.0
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.4e-17 93.2 149 40.3
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 5.8e-17 92.4 147 42.2
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 3.7e-16 89.7 78 50.0
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 6.4e-16 89.0 77 55.8
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-13 81.3 103 45.6
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.8e-11 73.6 55 52.7
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 5.2e-10 69.3 95 44.2
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.7e-08 64.3 74 45.9
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.2e-06 58.2 60 45.0
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.2e-06 58.2 113 34.5
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 4.6e-06 56.2 51 47.1


User provided reference genes

Program Settings