Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 4.7e-180 634.4 320 100.0
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 6.2e-156 554.3 321 90.3
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 1.2e-146 523.5 273 96.0
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 6.2e-116 421.4 308 70.1
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 5.8e-114 414.8 276 75.7
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 5.1e-110 401.7 286 68.9
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 3.3e-109 399.1 308 67.5
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 2.1e-108 396.4 279 69.9
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 2.8e-108 396.0 296 66.9
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.4e-107 393.7 270 69.6
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.4e-107 392.9 309 66.0
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 3.1e-107 392.5 311 64.3
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 4.0e-107 392.1 304 63.8
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 4.0e-107 392.1 302 63.9
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 6.9e-107 391.3 309 64.4
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 9.0e-107 391.0 310 63.9
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 1.2e-106 390.6 310 63.2
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 1.2e-106 390.6 309 65.7
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 1.5e-106 390.2 310 66.1
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 2.0e-106 389.8 308 64.0
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.6e-106 389.4 311 63.3
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 2.6e-106 389.4 305 65.9
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 3.4e-106 389.0 311 64.0
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 4.5e-106 388.7 309 64.7
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 7.6e-106 387.9 270 71.5
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 1.7e-105 386.7 308 64.0
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 2.9e-105 386.0 278 66.9
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 2.9e-105 386.0 289 66.1
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 8.4e-105 384.4 299 65.9
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.4e-104 383.6 295 66.1
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 1.4e-104 383.6 270 68.9
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 1.9e-104 383.3 306 63.4
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 1.9e-104 383.3 293 62.5
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 2.5e-104 382.9 262 70.6
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 2.5e-104 382.9 268 69.4
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 4.2e-104 382.1 301 64.1
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 4.2e-104 382.1 301 64.1
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 9.3e-104 380.9 274 67.9
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 2.1e-103 379.8 289 66.4
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 3.5e-103 379.0 277 69.3
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 4.6e-103 378.6 289 66.4
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 4.6e-103 378.6 270 68.5
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 6.0e-103 378.3 315 63.2
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 6.0e-103 378.3 295 66.4
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 7.9e-103 377.9 331 61.0
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.3e-102 377.1 274 68.6
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 1.8e-102 376.7 293 64.8
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 2.3e-102 376.3 289 66.8
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 2.3e-102 376.3 249 69.5
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 2.3e-102 376.3 285 65.3
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 3.0e-102 375.9 276 69.2
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 3.9e-102 375.6 262 69.8
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 1.1e-101 374.0 290 64.8
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 1.1e-101 374.0 287 65.9
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.5e-101 373.6 273 67.8
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 1.9e-101 373.2 295 65.1
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 1.9e-101 373.2 265 68.7
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 1.3e-100 370.5 302 63.9
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.6e-100 370.2 269 66.9
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 2.8e-100 369.4 322 60.9
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 3.7e-100 369.0 287 63.1
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 6.3e-100 368.2 268 66.0
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 6.3e-100 368.2 269 67.7
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 8.2e-100 367.9 275 65.5
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 1.1e-99 367.5 289 63.7
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 1.4e-99 367.1 329 58.4
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.4e-99 366.3 299 63.2
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 2.4e-99 366.3 299 63.2
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 2.4e-99 366.3 278 63.7
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 2.4e-99 366.3 289 63.3
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 3.1e-99 365.9 307 61.9
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 3.1e-99 365.9 231 76.2
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 6.9e-99 364.8 266 65.4
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 1.5e-98 363.6 294 61.6
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 2.0e-98 363.2 297 61.6
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 3.4e-98 362.5 263 67.7
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 4.5e-98 362.1 232 75.9
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 7.6e-98 361.3 273 64.8
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 1.4e-96 357.1 284 63.0
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 4.2e-96 355.5 344 56.4
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 9.3e-96 354.4 314 58.6
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 3.6e-95 352.4 231 73.2
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 3.6e-95 352.4 233 72.5
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 4.6e-95 352.1 288 61.1
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 4.6e-95 352.1 288 61.1
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 6.1e-95 351.7 289 60.9
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 6.1e-95 351.7 232 73.3
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 7.9e-95 351.3 229 72.9
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 1.8e-94 350.1 303 60.1
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 1.8e-94 350.1 287 61.3
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 1.1e-93 347.4 344 54.1
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 7.7e-90 334.7 311 57.9
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 3.0e-86 322.8 262 61.5
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 3.9e-86 322.4 254 59.1
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 3.9e-86 322.4 197 76.6
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 6.7e-86 321.6 293 58.0
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 4.4e-85 318.9 419 46.1
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.4e-83 313.9 279 57.7
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.4e-83 313.9 253 58.9
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 4.5e-82 308.9 261 57.9
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 6.5e-81 305.1 200 73.0
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 8.5e-81 304.7 237 64.1
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 1.3e-73 280.8 218 66.1
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 4.2e-72 275.8 197 64.5
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 2.2e-68 263.5 174 70.1
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 8.2e-68 261.5 253 57.7
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.5e-64 250.8 222 58.1
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 6.3e-60 235.3 224 54.0
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 8.3e-60 235.0 219 58.4
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 6.5e-57 225.3 195 61.0
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 1.5e-53 214.2 203 57.1
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-53 213.8 157 65.0
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 4.9e-52 209.1 172 63.4
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 4.1e-51 206.1 172 62.8
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 3.5e-50 203.0 199 58.8
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 5.9e-50 202.2 130 74.6
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.1e-48 198.0 122 77.0
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 2.2e-44 183.7 229 47.2
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 4.7e-39 166.0 157 57.3
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 6.2e-39 165.6 157 57.3
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-38 164.5 155 56.8
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-38 164.5 155 57.4
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-38 162.9 157 56.1
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 5.2e-38 162.5 108 74.1
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 6.8e-38 162.2 172 52.3
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-37 160.6 223 45.7
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 5.8e-37 159.1 157 54.8
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 9.8e-37 158.3 202 47.5
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 4.6e-34 149.4 104 68.3
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 3.9e-33 146.4 144 55.6
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 6.6e-33 145.6 106 66.0
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 1.1e-32 144.8 281 36.7
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 5.6e-32 142.5 88 77.3
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-30 136.3 157 51.0
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-29 133.3 107 64.5
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 4.4e-29 132.9 94 72.3
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 9.9e-29 131.7 160 49.4
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 9.9e-29 131.7 160 49.4
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 1.3e-28 131.3 180 46.1
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-27 128.3 122 56.6
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-27 127.9 121 56.2
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 1.1e-24 118.2 76 71.1
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-21 108.2 139 46.8
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 4.4e-21 106.3 109 53.2
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-18 97.8 70 70.0
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 4.6e-18 96.3 133 42.9
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 9.0e-14 82.0 55 65.5
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 2.0e-13 80.9 57 66.7
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-13 80.1 99 46.5
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 7.6e-13 79.0 48 79.2


User provided reference genes

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