Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3878 Papaver somniferum HOM05D005606 ORTHO05D006446 0.0e+00 1076.6 544 100.0
PSO063G0483 Papaver somniferum HOM05D005606 ORTHO05D006446 3.2e-306 1054.3 544 98.3
Nn4g24861 Nelumbo nucifera HOM05D005606 ORTHO05D006446 1.9e-205 719.5 537 67.2
Aqoxy3G04204 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 1.4e-197 693.3 537 65.7
Dinv09771 Davidia involucrata HOM05D005606 ORTHO05D006446 1.0e-179 634.0 541 61.9
PGSC0003DMG400025630 Solanum tuberosum HOM05D005606 ORTHO05D006446 1.6e-172 610.1 543 58.2
Lj5A166G73 Lonicera japonica HOM05D005606 ORTHO05D006446 2.7e-172 609.4 541 59.3
Rhsim08G0124400 Rhododendron simsii HOM05D005606 ORTHO05D006446 2.6e-170 602.8 544 58.5
SalBow5G2126 Salvia bowleyana HOM05D005606 ORTHO05D006446 7.5e-170 601.3 542 57.7
Solyc03g098340.4 Solanum lycopersicum HOM05D005606 ORTHO05D006446 6.3e-169 598.2 543 57.5
Sopen03g029090 Solanum pennellii HOM05D005606 ORTHO05D006446 6.3e-169 598.2 543 57.5
MD05G1278400 Malus domestica HOM05D005606 ORTHO05D006446 5.5e-165 585.1 550 58.4
Potri.001G013300 Populus trichocarpa HOM05D005606 ORTHO05D006446 1.2e-164 583.9 545 58.9
TWI81G0505 Tripterygium wilfordii HOM05D005606 ORTHO05D006446 1.2e-164 583.9 547 57.8
Prupe.4G086400 Prunus persica HOM05D005606 ORTHO05D006446 5.2e-163 578.6 553 58.6
SGA_v2.0_scaffold90G27762 Striga asiatica HOM05D005606 ORTHO05D006446 5.7e-162 575.1 543 56.0
Atru.chr9.366 Acer truncatum HOM05D005606 ORTHO05D006446 1.7e-161 573.5 547 58.7
GSVIVG01012914001 Vitis vinifera HOM05D005606 ORTHO05D006446 6.3e-161 571.6 542 57.9
Ciclev10023713m.g Citrus clementina HOM05D005606 ORTHO05D006446 8.3e-161 571.2 545 59.4
Sabra01G0009700 Salix brachista HOM05D005606 ORTHO05D006446 8.3e-161 571.2 563 57.2
MSTRG.11550 Avicennia marina HOM05D005606 ORTHO05D006446 1.2e-159 567.4 542 55.9
CiPaw.09G118900 Carya illinoinensis HOM05D005606 ORTHO05D006446 1.6e-159 567.0 560 56.1
RcHm_v2.0_Chr5g0015011 Rosa chinensis HOM05D005606 ORTHO05D006446 1.6e-159 567.0 541 57.1
CANSAT35G0050 Cannabis sativa HOM05D005606 ORTHO05D006446 3.5e-159 565.8 550 56.9
Cc04_g08790 Coffea canephora HOM05D005606 ORTHO05D006446 8.6e-158 561.2 543 55.2
Manes.03G090364 Manihot esculenta HOM05D005606 ORTHO05D006446 1.1e-157 560.8 543 55.8
CSS0018749 Camellia sinensis var. sinensis HOM05D005606 ORTHO05D006446 9.5e-157 557.8 548 56.2
Actinidia37370 Actinidia chinensis HOM05D005606 ORTHO05D006446 1.2e-156 557.4 513 58.1
Eucgr.K02306 Eucalyptus grandis HOM05D005606 ORTHO05D006446 1.6e-156 557.0 547 55.2
FvH4_3g04970 Fragaria vesca HOM05D005606 ORTHO05D006446 1.0e-155 554.3 543 56.2
FAN11G2201 Fragaria x ananassa HOM05D005606 ORTHO05D006446 2.0e-154 550.1 543 56.0
FAN21G0753 Fragaria x ananassa HOM05D005606 ORTHO05D006446 2.6e-154 549.7 545 55.2
Migut.O00253 Erythranthe guttata HOM05D005606 ORTHO05D006446 3.4e-154 549.3 544 53.7
FAN16G3646 Fragaria x ananassa HOM05D005606 ORTHO05D006446 9.8e-154 547.7 542 55.4
Manes.15G103000 Manihot esculenta HOM05D005606 ORTHO05D006446 1.3e-153 547.4 543 55.2
FAN25G1117 Fragaria x ananassa HOM05D005606 ORTHO05D006446 1.7e-153 547.0 542 55.5
Cfa000886 Carpinus fangiana HOM05D005606 ORTHO05D006446 4.9e-153 545.4 560 56.8
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea HOM05D005606 ORTHO05D006446 4.5e-151 538.9 540 54.8
ClCG01G024960 Citrullus lanatus HOM05D005606 ORTHO05D006446 1.3e-150 537.3 553 53.9
MD10G1257000 Malus domestica HOM05D005606 ORTHO05D006446 1.7e-150 537.0 553 54.4
CsaV3_6G052120 Cucumis sativus L. HOM05D005606 ORTHO05D006446 2.3e-150 536.6 553 53.9
PGR044G1587 Punica granatum HOM05D005606 ORTHO05D006446 2.3e-150 536.6 547 55.8
Cpa.g.sc111.40 Carica papaya HOM05D005606 ORTHO05D006446 2.5e-149 533.1 543 54.7
Sed0004896 Sechium edule HOM05D005606 ORTHO05D006446 4.7e-148 528.9 553 53.7
QL05p054675 Quercus lobata HOM05D005606 ORTHO05D006446 8.0e-148 528.1 695 47.9
CDE04G0503 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 2.3e-147 526.6 487 56.1
Sed0002755 Sechium edule HOM05D005606 ORTHO05D006446 1.3e-145 520.8 549 53.0
Oeu023545.1 Olea europaea HOM05D005606 ORTHO05D006446 8.3e-145 518.1 544 52.0
Gohir.A08G038700 Gossypium hirsutum HOM05D005606 ORTHO05D006446 2.4e-144 516.5 536 53.5
DCAR_010217 Daucus carota HOM05D005606 ORTHO05D006446 7.0e-144 515.0 535 52.1
Lalb_Chr20g0117701 Lupinus albus HOM05D005606 ORTHO05D006446 9.2e-144 514.6 540 53.5
arahy.Tifrunner.gnm1.ann1.KIB2TD Arachis hypogaea HOM05D000001 ORTHO05D006446 2.7e-143 513.1 525 54.3
Peaxi162Scf00171g00427 Petunia axillaris HOM05D005606 ORTHO05D006446 3.5e-143 512.7 540 51.3
Thecc.03G071900 Theobroma cacao HOM05D005606 ORTHO05D006446 3.9e-142 509.2 536 52.6
Gorai.004G048400 Gossypium raimondii HOM05D005606 ORTHO05D006446 6.6e-142 508.4 536 52.8
Hund06728 Selenicereus undatus HOM05D005606 ORTHO05D006446 8.6e-142 508.1 543 52.3
EL10Ac8g19487 Beta vulgaris HOM05D005606 ORTHO05D006446 1.9e-141 506.9 540 52.0
Lj6g0007906 Lotus japonicus HOM05D005606 ORTHO05D006446 3.3e-141 506.1 542 53.7
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea HOM05D005606 ORTHO05D006446 5.6e-141 505.4 527 53.5
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 5.6e-141 505.4 444 59.2
Oeu038484.2 Olea europaea HOM05D005606 ORTHO05D006446 7.3e-141 505.0 579 48.0
Glyma.15G091800 Glycine max HOM05D005606 ORTHO05D006446 2.1e-140 503.4 536 52.8
Gohir.D08G048900 Gossypium hirsutum HOM05D005606 ORTHO05D006446 2.1e-140 503.4 536 53.0
MELO3C007099.2 Cucumis melo HOM05D005606 ORTHO05D006446 3.6e-140 502.7 578 50.5
Lsat_1_v5_gn_8_221 Lactuca sativa HOM05D005606 ORTHO05D006446 8.0e-140 501.5 540 53.7
TAR629G2351 Trochodendron aralioides HOM05D005606 ORTHO05D006446 6.8e-139 498.4 381 67.5
Nitab4.5_0004612g0090 Nicotiana tabacum HOM05D005606 ORTHO05D006446 1.3e-137 494.2 543 52.5
Duzib211G0450 Durio zibethinus HOM05D005606 ORTHO05D006446 1.7e-137 493.8 536 52.2
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea HOM05D005606 ORTHO05D006446 1.2e-135 487.6 471 55.4
Sc04g0004710 Simmondsia chinensis HOM05D005606 ORTHO05D006446 1.6e-135 487.3 541 51.6
CDE02G0130 Ceratophyllum demersum HOM05D005606 ORTHO05D006446 2.1e-132 476.9 467 54.4
Ca_00517_v3 Cicer arietinum L. HOM05D005606 ORTHO05D006446 2.8e-132 476.5 540 50.2
Medtr2g018830 Medicago truncatula HOM05D005606 ORTHO05D006446 4.0e-131 472.6 539 50.5
Glyma.13G220600 Glycine max HOM05D005606 ORTHO05D006446 8.9e-131 471.5 538 51.5
AUR62041591 Chenopodium quinoa HOM05D005606 ORTHO05D006446 2.0e-130 470.3 484 53.9
HanXRQChr05g0141141 Helianthus annuus HOM05D005606 ORTHO05D006446 1.3e-129 467.6 541 50.5
Thhalv10018404m.g Eutrema salsugineum HOM05D005606 ORTHO05D006446 1.2e-127 461.1 539 49.9
THA.LOC104810627 Tarenaya hassleriana HOM05D005606 ORTHO05D006446 1.6e-124 450.7 546 48.9
AL2G33010 Arabidopsis lyrata HOM05D005606 ORTHO05D006446 3.6e-124 449.5 539 48.4
Sp5g28210 Schrenkiella parvula HOM05D005606 ORTHO05D006446 6.2e-124 448.7 544 49.3
AT1G73240 Arabidopsis thaliana HOM05D005606 ORTHO05D006446 1.8e-123 447.2 539 48.4
BcaC08g46742 Brassica carinata HOM05D005606 ORTHO05D006446 3.1e-123 446.4 541 49.2
VMungo0540G1265 Vigna mungo HOM05D005606 ORTHO05D006446 6.8e-123 445.3 524 49.6
SEGI_11499 Sequoiadendron giganteum HOM05D005606 ORTHO05D006446 1.2e-122 444.5 549 45.9
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 2.0e-122 443.7 482 51.9
C06p47380 Brassica napus HOM05D005606 ORTHO05D006446 4.4e-122 442.6 541 48.8
Phvul.006G167500 Phaseolus vulgaris HOM05D005606 ORTHO05D006446 4.4e-122 442.6 391 58.6
BolC6t39777H Brassica oleracea HOM05D005606 ORTHO05D006446 5.8e-122 442.2 541 49.2
BcaB03g15036 Brassica carinata HOM05D005606 ORTHO05D006446 3.2e-120 436.4 540 47.8
BraA07t31468Z Brassica rapa HOM05D005606 ORTHO05D006446 7.1e-120 435.3 540 48.1
CARHR066250 Cardamine hirsuta HOM05D005606 ORTHO05D006446 1.2e-119 434.5 540 46.5
A07p39190 Brassica napus HOM05D005606 ORTHO05D006446 1.6e-119 434.1 540 48.0
Carub.0002s2004 Capsella rubella HOM05D005606 ORTHO05D006446 2.7e-119 433.3 539 46.9
Aa31LG4G3530 Aethionema arabicum HOM05D005606 ORTHO05D006446 2.3e-118 430.3 544 48.3
Psat1g191760 Pisum sativum HOM05D005606 ORTHO05D006446 6.4e-113 412.1 353 59.2
MBI06_g43804_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.4e-107 393.7 384 55.7
Medtr8g007580 Medicago truncatula HOM05D005606 ORTHO05D006446 6.4e-105 385.6 553 45.0
Nitab4.5_0001180g0240 Nicotiana tabacum HOM05D005606 ORTHO05D006446 3.9e-102 376.3 560 41.6
vmacro17739 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 3.8e-97 359.8 367 53.4
Zm00001eb250810 Zea mays HOM05D005606 ORTHO05D006446 3.8e-97 359.8 394 48.2
Medtr8g008810 Medicago truncatula HOM05D005606 ORTHO05D006446 7.9e-95 352.1 327 56.3
ATR0824G067 Amborella trichopoda HOM05D005606 ORTHO05D006446 1.1e-93 348.2 380 48.4
Pp3c23_16320 Physcomitrium patens HOM05D005606 ORTHO05D006446 4.6e-87 326.2 565 37.9
Mapoly0061s0120 Marchantia polymorpha HOM05D005606 ORTHO05D006446 7.9e-87 325.5 575 38.3
Potri.003G213050 Populus trichocarpa HOM05D005606 ORTHO05D006446 5.7e-85 319.3 280 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis HOM05D005606 ORTHO05D006446 1.4e-83 314.7 564 37.4
MBI06_g39886_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 1.5e-82 311.2 279 59.9
AUR62042457 Chenopodium quinoa HOM05D005606 ORTHO05D006446 5.1e-78 296.2 327 52.0
Zm00001eb187400 Zea mays HOM05D005606 ORTHO05D006446 2.0e-74 284.3 398 41.5
Os02g0684300 Oryza sativa ssp. japonica HOM05D005606 ORTHO05D006446 1.3e-73 281.6 263 55.9
MBI06_g21907_MAGBIO Magnolia biondii HOM05D005606 ORTHO05D006446 2.2e-73 280.8 266 58.6
SMO358G0536 Selaginella moellendorffii HOM05D005606 ORTHO05D006446 5.5e-72 276.2 478 37.9
TPR.G7652 Trifolium pratense HOM05D005606 ORTHO05D006446 9.1e-67 258.8 209 60.8
CBR_g11193 Chara braunii HOM05D005606 ORTHO05D006446 1.7e-60 238.0 416 36.8
Lj9C350G3 Lonicera japonica HOM05D005606 ORTHO05D006446 8.2e-60 235.7 272 49.3
ATR0879G001 Amborella trichopoda HOM05D005606 ORTHO05D006446 1.2e-58 231.9 196 58.7
unitig_750.g28452 Utricularia gibba HOM05D005606 ORTHO05D006446 1.6e-58 231.5 345 42.9
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 2.3e-54 217.6 165 64.8
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 8.3e-52 209.1 159 64.8
Haze_05701 Corylus avellana HOM05D005606 ORTHO05D006446 1.5e-48 198.4 266 47.7
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 1.1e-43 182.2 151 60.3
ATR0824G212 Amborella trichopoda HOM05D005606 ORTHO05D006446 2.9e-41 174.1 163 55.2
Aqoxy3G04211 Aquilegia oxysepala HOM05D005606 ORTHO05D006446 2.6e-37 161.0 272 43.4
ECA233G5513 Erigeron canadensis HOM05D005606 ORTHO05D006446 2.9e-36 157.5 197 48.2
TPR.G20455 Trifolium pratense HOM05D005606 ORTHO05D006446 3.6e-31 140.6 119 60.5
vmacro17738 Vaccinium macrocarpon HOM05D005606 ORTHO05D006446 1.0e-30 139.0 123 59.3
Medtr8g008813 Medicago truncatula HOM05D005606 ORTHO05D006446 4.4e-29 133.7 146 50.0
Hma1.2p1_2967F.1_g331010 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 4.9e-28 130.2 244 38.9
Hma1.2p1_0403F.1_g145170 Hydrangea macrophylla HOM05D005606 ORTHO05D006446 1.9e-27 128.3 244 38.5
Medtr0199s0020 Medicago truncatula HOM05D005606 ORTHO05D006446 4.1e-19 100.5 154 43.5
TPR.G26262 Trifolium pratense HOM05D005606 ORTHO05D006446 2.0e-13 81.6 181 35.9
Ah.15g099030 Amaranthus hybridus HOM05D002838 ORTHO05D002114 1.7e-12 78.6 114 43.9
Sabra03G0155900 Salix brachista HOM05D005606 ORTHO05D006446 7.3e-08 63.2 62 50.0
Sabra03G0159100 Salix brachista HOM05D005606 ORTHO05D006446 7.3e-08 63.2 62 50.0
Oeu061196.1 Olea europaea HOM05D005606 ORTHO05D006446 2.4e-06 58.2 97 38.1
Actinidia09048 Actinidia chinensis HOM05D005606 ORTHO05D006446 3.1e-06 57.8 81 39.5


User provided reference genes

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