Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 1.1e-190 669.8 361 100.0
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 6.7e-175 617.5 361 92.5
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 5.8e-62 242.3 349 45.6
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 2.5e-60 236.9 352 47.4
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 3.3e-57 226.5 346 46.0
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 4.3e-57 226.1 345 45.8
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 2.1e-56 223.8 354 46.9
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 2.1e-56 223.8 356 45.5
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 3.7e-56 223.0 349 44.1
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 4.8e-56 222.6 352 46.3
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 4.5e-54 216.1 343 44.3
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 5.9e-54 215.7 369 43.6
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 1.0e-53 214.9 327 44.6
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.4e-52 211.1 340 42.6
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 2.5e-52 210.3 339 42.8
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 9.3e-52 208.4 350 44.6
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 1.6e-51 207.6 339 44.0
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 2.7e-51 206.8 339 44.0
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 6.1e-51 205.7 339 44.0
PSO063G4277 Papaver somniferum HOM05D005253 ORTHO05D006058 7.9e-51 205.3 113 95.6
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 7.9e-51 205.3 357 42.3
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 1.0e-50 204.9 344 44.5
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 1.8e-50 204.1 342 43.3
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.8e-50 204.1 350 43.7
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 3.0e-50 203.4 310 44.8
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 5.1e-50 202.6 372 40.3
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 8.7e-50 201.8 342 39.8
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.5e-49 200.3 347 41.5
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 1.3e-48 198.0 323 43.7
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.6e-48 197.6 333 42.6
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 4.8e-48 196.1 335 43.0
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 4.8e-48 196.1 300 44.3
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 1.1e-47 194.9 348 42.8
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.1e-47 194.9 340 40.9
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 2.4e-47 193.7 346 43.9
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 2.4e-47 193.7 339 41.6
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 5.3e-47 192.6 333 41.7
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 5.3e-47 192.6 342 41.8
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 6.9e-47 192.2 333 42.6
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 9.1e-47 191.8 340 42.6
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 1.2e-46 191.4 348 40.5
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.0e-46 190.7 348 41.7
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 2.6e-46 190.3 340 40.6
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 3.4e-46 189.9 312 43.6
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 7.7e-46 188.7 347 38.6
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 1.7e-45 187.6 344 41.0
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 5.0e-45 186.0 511 33.7
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 6.5e-45 185.7 342 39.2
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 8.5e-45 185.3 346 40.5
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 1.4e-44 184.5 342 39.2
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.9e-44 184.1 349 39.8
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.9e-44 184.1 338 40.2
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 2.5e-44 183.7 326 43.6
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 9.4e-44 181.8 348 41.4
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 9.4e-44 181.8 351 40.2
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 1.6e-43 181.0 343 40.8
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 2.1e-43 180.6 293 41.3
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 2.1e-43 180.6 299 41.5
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 4.6e-43 179.5 342 38.9
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 7.9e-43 178.7 379 38.0
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 7.9e-43 178.7 335 40.6
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.0e-42 178.3 336 38.7
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 1.0e-42 178.3 336 41.4
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 1.8e-42 177.6 350 41.7
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 2.3e-42 177.2 320 41.6
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 2.3e-42 177.2 335 40.9
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 3.0e-42 176.8 352 39.8
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 3.9e-42 176.4 341 41.9
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 6.7e-42 175.6 347 40.6
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 8.8e-42 175.3 347 40.1
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 8.8e-42 175.3 345 38.3
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 8.8e-42 175.3 309 43.7
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 1.5e-41 174.5 356 37.4
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 2.0e-41 174.1 309 42.4
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 7.4e-41 172.2 339 38.6
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 9.7e-41 171.8 348 39.9
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 9.7e-41 171.8 353 39.1
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 1.3e-40 171.4 340 37.6
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 1.3e-40 171.4 340 37.6
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 6.3e-40 169.1 293 39.6
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 1.1e-39 168.3 313 40.3
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 6.9e-39 165.6 311 41.2
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.2e-38 164.9 325 39.4
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 2.6e-38 163.7 353 39.1
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 3.4e-38 163.3 300 40.0
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 4.5e-38 162.9 343 37.0
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 4.5e-38 162.9 351 38.7
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 2.2e-37 160.6 307 40.4
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 6.5e-37 159.1 292 39.0
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 8.5e-37 158.7 339 37.8
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.1e-36 158.3 309 36.9
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 1.4e-36 157.9 258 43.8
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 1.9e-36 157.5 311 39.2
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 3.2e-36 156.8 347 39.8
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 7.2e-36 155.6 342 37.1
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 9.4e-36 155.2 315 40.6
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 1.2e-35 154.8 327 37.3
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 1.2e-35 154.8 299 38.8
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 2.1e-35 154.1 299 37.1
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 2.7e-35 153.7 309 39.5
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 4.7e-35 152.9 293 36.5
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 7.9e-35 152.1 252 44.8
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 1.8e-34 151.0 341 36.1
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 2.3e-34 150.6 330 38.8
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 2.3e-34 150.6 343 37.6
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 5.2e-34 149.4 312 38.5
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.0e-33 147.5 251 43.0
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 2.0e-33 147.5 337 34.7
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 2.6e-33 147.1 349 35.8
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 4.4e-33 146.4 350 36.0
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 2.2e-32 144.1 341 37.0
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 3.7e-32 143.3 307 36.8
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 3.7e-32 143.3 282 40.1
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 1.4e-31 141.4 314 37.6
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 9.1e-31 138.7 344 34.0
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 1.2e-30 138.3 449 30.7
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 1.2e-30 138.3 336 35.7
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.9e-28 131.0 344 34.9
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 2.5e-28 130.6 337 33.5
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 1.6e-27 127.9 260 40.0
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 4.0e-26 123.2 358 33.5
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 1.2e-25 121.7 233 38.2
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 2.6e-25 120.6 302 34.1
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 5.7e-25 119.4 301 34.2
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 8.2e-24 115.5 267 34.8
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 1.0e-21 108.6 187 39.0
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 3.8e-21 106.7 373 28.7
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 2.7e-19 100.5 356 31.5
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.8e-18 97.8 123 51.2
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 1.5e-17 94.7 247 34.4
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 7.5e-17 92.4 346 30.6
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.2e-16 90.9 341 30.8
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 3.7e-16 90.1 264 32.2
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 5.9e-14 82.8 157 40.1
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.0e-13 82.0 91 54.9
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 2.5e-12 77.4 111 45.9
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 5.5e-12 76.3 102 49.0
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 1.4e-10 71.6 250 32.4
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 8.8e-10 68.9 106 48.1
AagrBONN_evm.TU.Sc2ySwM_368.1809 Anthoceros agrestis HOM05D025852 ORTHO05D031190 2.6e-09 67.4 391 25.6
SMO134G0145 Selaginella moellendorffii HOM05D025852 ORTHO05D006058 4.4e-09 66.6 311 23.5
BraA02t04942Z Brassica rapa HOM05D009919 ORTHO05D012044 2.2e-08 64.3 113 38.9
C02p03410 Brassica napus HOM05D009919 ORTHO05D012044 7.0e-07 59.3 104 40.4
BolC2t06302H Brassica oleracea HOM05D009919 ORTHO05D012044 7.0e-07 59.3 104 40.4
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 1.2e-06 58.5 95 43.2
Gohir.D13G101706 Gossypium hirsutum HOM05D005253 ORTHO05D006058 7.8e-06 55.8 68 48.5


User provided reference genes

Program Settings