Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 0.0e+00 1422.5 713 100.0
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 0.0e+00 1392.1 713 97.9
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 1.4e-253 879.8 719 64.5
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 5.3e-240 834.7 716 60.5
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 8.4e-222 774.2 734 56.9
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 1.1e-221 773.9 718 56.1
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 9.3e-213 744.2 712 53.5
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 4.6e-212 741.9 692 55.3
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 1.0e-211 740.7 713 54.6
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.1e-208 730.7 715 54.1
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 5.3e-208 728.4 708 54.5
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 2.6e-207 726.1 706 54.4
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 3.9e-203 712.2 711 53.0
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 7.4e-202 708.0 700 54.9
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.3e-201 707.2 697 53.5
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.7e-201 706.8 717 52.0
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 2.2e-201 706.4 715 52.7
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 3.1e-200 702.6 675 54.5
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 1.2e-199 700.7 717 51.9
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 2.6e-199 699.5 714 50.8
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 1.3e-198 697.2 712 51.0
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.2e-196 690.6 697 50.9
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 7.9e-196 688.0 708 52.3
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 5.2e-195 685.3 706 50.8
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.5e-194 683.7 665 52.9
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 4.8e-193 678.7 668 53.4
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 1.8e-192 676.8 714 50.3
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 3.1e-192 676.0 707 50.6
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 1.2e-191 674.1 714 50.8
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 3.5e-191 672.5 709 51.8
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 5.0e-190 668.7 709 52.0
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 6.5e-190 668.3 727 49.8
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 4.2e-189 665.6 714 51.0
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 4.2e-189 665.6 718 49.6
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 4.7e-188 662.1 710 49.7
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.0e-187 661.0 709 51.2
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.0e-187 661.0 709 51.5
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.8e-187 660.2 703 49.9
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 2.3e-187 659.8 645 55.5
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 1.2e-186 657.5 707 51.1
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 2.0e-186 656.8 665 51.3
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 3.7e-185 652.5 716 49.3
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 3.7e-185 652.5 699 50.4
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.6e-183 647.1 734 47.7
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 3.5e-183 646.0 720 48.8
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 7.2e-181 638.3 686 51.6
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 1.6e-180 637.1 702 48.6
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 4.7e-180 635.6 707 48.1
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.7e-180 635.6 703 48.8
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 4.0e-179 632.5 723 47.3
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.6e-178 629.8 705 47.8
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 3.4e-178 629.4 712 48.0
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 3.7e-177 625.9 712 47.5
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 4.8e-177 625.5 753 48.3
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 5.4e-176 622.1 714 48.0
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 5.4e-176 622.1 714 48.2
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 8.5e-174 614.8 696 47.7
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 1.5e-173 614.0 750 46.3
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 5.5e-173 612.1 696 47.7
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 5.5e-173 612.1 674 48.4
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 7.2e-173 611.7 698 47.6
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.1e-172 610.1 707 46.1
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.0e-171 607.8 702 46.2
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 8.8e-171 604.7 716 46.2
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 7.5e-170 601.7 725 45.9
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 1.8e-168 597.0 718 46.9
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 7.0e-168 595.1 716 45.8
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 3.5e-167 592.8 685 46.6
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 4.5e-167 592.4 706 45.8
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 7.7e-167 591.7 708 47.7
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.9e-166 589.7 698 46.7
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 5.0e-166 589.0 709 49.4
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 8.6e-166 588.2 698 45.8
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 8.6e-166 588.2 708 46.2
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 1.5e-165 587.4 554 56.3
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 1.5e-165 587.4 679 47.9
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 7.3e-165 585.1 703 46.1
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 3.6e-164 582.8 701 45.8
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 6.1e-164 582.0 703 46.4
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 1.0e-163 581.3 664 47.3
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.3e-161 574.3 706 45.6
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 8.3e-161 571.6 705 44.7
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 9.2e-160 568.2 708 45.2
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.0e-159 567.0 645 47.9
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 7.3e-157 558.5 707 43.4
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 6.2e-156 555.4 768 41.8
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.8e-155 553.9 668 45.5
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 3.5e-151 539.7 668 44.6
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 5.0e-150 535.8 708 42.2
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 3.1e-147 526.6 720 41.8
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 2.9e-145 520.0 768 40.9
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.3e-142 511.1 665 42.1
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 5.1e-142 509.2 774 39.4
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 1.8e-139 500.7 689 43.5
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.0e-139 499.6 759 39.9
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 1.5e-138 497.7 705 41.8
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 5.8e-138 495.7 638 45.0
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 6.4e-137 492.3 752 40.0
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 2.4e-136 490.3 564 47.0
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 7.1e-136 488.8 609 45.6
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.3e-134 484.6 685 39.9
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 2.1e-127 460.7 644 42.7
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 1.1e-123 448.4 515 48.5
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 4.0e-123 446.4 528 47.2
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.3e-113 414.8 497 46.7
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 1.9e-112 411.0 520 46.7
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 2.1e-111 407.5 521 46.3
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 3.0e-110 403.7 392 55.9
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 2.0e-98 364.4 707 33.1
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 7.6e-98 362.5 483 43.5
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 8.5e-97 359.0 521 42.2
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 9.3e-96 355.5 740 33.2
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 5.5e-88 329.7 280 55.7
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.0e-86 325.5 371 45.0
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 7.4e-85 319.3 261 57.1
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 3.2e-80 303.9 248 57.7
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.8e-70 271.6 330 46.4
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 7.5e-69 266.2 298 45.0
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 9.7e-69 265.8 215 58.1
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 5.5e-64 250.0 290 47.2
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.8e-46 191.8 113 72.6
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 4.1e-35 154.1 103 71.8
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 5.4e-27 127.1 155 46.5
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 2.3e-25 121.7 128 49.2
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 3.6e-23 114.4 201 37.3
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 4.7e-23 114.0 209 36.8
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 8.1e-23 113.2 132 47.7
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.8e-22 112.1 142 48.6
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 3.6e-15 87.8 85 48.2
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 1.4e-14 85.9 124 43.5
SEGI_05558 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 4.9e-12 77.4 129 36.4
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 5.4e-11 73.9 56 60.7


User provided reference genes

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