Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.6e-129 466.1 234 100.0
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 2.2e-126 455.7 234 97.4
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 2.1e-97 359.4 227 75.8
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 2.6e-95 352.4 230 73.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 8.4e-94 347.4 232 71.1
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.3e-91 339.3 226 71.2
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.3e-90 335.1 232 69.8
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 9.6e-90 334.0 232 69.8
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.8e-89 332.4 232 70.3
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.6e-89 332.0 232 69.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 3.6e-89 332.0 228 71.1
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 4.7e-89 331.6 226 73.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.4e-88 330.1 235 69.8
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 3.1e-88 328.9 237 69.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 5.2e-88 328.2 233 67.8
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 8.9e-88 327.4 228 68.4
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 8.9e-88 327.4 230 68.3
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.2e-87 327.0 236 67.4
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.6e-87 325.9 239 69.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 3.4e-87 325.5 228 69.7
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 4.4e-87 325.1 235 68.9
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 4.4e-87 325.1 228 69.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 7.6e-87 324.3 230 70.4
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 7.6e-87 324.3 232 67.7
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 9.9e-87 323.9 231 68.8
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.9e-87 323.9 234 70.1
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 9.9e-87 323.9 235 66.8
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 1.3e-86 323.6 226 70.4
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 2.2e-86 322.8 233 69.5
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 3.8e-86 322.0 233 67.8
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 8.4e-86 320.9 232 68.1
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.4e-86 320.9 229 69.4
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.1e-85 320.5 299 55.9
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.9e-85 319.7 230 69.1
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.9e-85 319.7 233 66.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 4.2e-85 318.5 232 68.5
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 7.1e-85 317.8 230 69.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.1e-85 317.8 232 67.2
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 9.3e-85 317.4 277 59.2
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.2e-84 317.0 232 66.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 1.2e-84 317.0 226 69.0
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.2e-84 317.0 227 67.0
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.2e-84 317.0 234 66.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.6e-84 316.6 236 68.2
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-84 316.2 232 66.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 7.8e-84 314.3 232 66.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 7.8e-84 314.3 226 68.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.3e-83 313.5 233 67.0
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.3e-83 312.8 230 67.0
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.3e-83 312.8 233 67.4
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 3.9e-83 312.0 226 68.1
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 5.1e-83 311.6 224 71.9
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 8.7e-83 310.8 230 65.7
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 8.7e-83 310.8 230 66.5
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.1e-82 310.5 230 66.1
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.5e-82 310.1 226 68.1
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.9e-82 309.7 232 66.8
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.5e-82 309.3 224 70.1
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.5e-82 309.3 224 70.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 5.6e-82 308.1 229 67.2
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 7.3e-82 307.8 229 69.0
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.6e-82 307.4 234 67.1
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.3e-81 307.0 231 63.2
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.8e-81 305.8 228 66.2
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 3.6e-81 305.4 223 70.0
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.8e-81 305.1 225 67.1
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.8e-81 305.1 227 66.1
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 1.8e-80 303.1 240 63.3
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.8e-80 303.1 235 65.1
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.0e-80 302.0 183 77.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 5.3e-80 301.6 177 79.1
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 5.3e-80 301.6 232 65.1
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 9.0e-80 300.8 230 63.5
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.2e-79 300.4 230 64.3
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.5e-79 300.1 231 63.2
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.5e-79 300.1 271 58.3
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 2.6e-79 299.3 181 75.1
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.6e-79 299.3 241 64.7
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 2.6e-79 299.3 232 63.4
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.4e-79 298.9 226 65.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 5.8e-79 298.1 228 65.4
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.7e-78 296.6 243 63.8
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 4.9e-78 295.0 228 64.9
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.4e-78 294.3 258 60.5
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 6.7e-75 284.6 202 68.3
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 1.9e-74 283.1 291 54.6
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 7.4e-74 281.2 226 62.8
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.4e-72 276.9 225 59.6
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 4.0e-72 275.4 223 60.5
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.0e-71 273.1 198 72.2
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 2.4e-69 266.2 232 60.3
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.2e-69 265.8 239 57.3
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 4.6e-68 261.9 162 74.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.8e-67 260.0 202 61.4
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.9e-66 256.5 208 60.6
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.3e-65 253.8 385 40.5
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 7.6e-63 244.6 245 52.2
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 7.1e-61 238.0 188 65.4
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.0e-59 232.6 189 60.8
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 1.9e-58 229.9 231 53.2
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 2.6e-55 219.5 185 57.3
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.0e-46 191.0 157 63.1
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.3e-46 190.7 188 49.5
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 7.9e-44 181.4 155 63.2
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.3e-43 179.9 185 56.2
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.2e-39 167.5 133 64.7
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-39 167.5 133 64.7
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 2.0e-39 166.8 165 53.9
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 4.7e-36 155.6 135 60.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 7.4e-34 148.3 222 36.5
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.3e-33 147.5 165 45.5
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.3e-27 126.7 149 51.0
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.0e-26 123.6 149 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.8e-24 117.1 155 42.6
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 3.6e-20 102.8 79 63.3
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 8.0e-20 101.7 98 57.1
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.5e-18 97.4 54 75.9
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.7e-17 94.0 109 50.5
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.3e-14 84.3 103 51.5
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.4e-11 74.3 101 44.6
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.4e-11 74.3 90 43.3
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 7.5e-10 68.6 47 61.7


User provided reference genes

Program Settings