Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.3e-206 720.7 343 100.0
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 2.1e-186 655.6 344 92.4
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 4.6e-109 398.7 333 57.7
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 3.0e-108 396.0 278 65.5
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.9e-107 393.3 318 59.4
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 5.7e-107 391.7 280 64.3
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 1.6e-106 390.2 316 59.2
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 2.2e-106 389.8 318 59.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 3.7e-106 389.0 279 65.9
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 1.1e-105 387.5 280 63.2
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 5.3e-105 385.2 280 63.6
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.9e-105 384.8 280 63.6
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 2.0e-104 383.3 318 59.1
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 7.7e-104 381.3 277 64.3
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.7e-103 380.2 318 58.8
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 8.5e-103 377.9 265 66.8
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 8.5e-103 377.9 289 60.6
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 2.5e-102 376.3 321 58.9
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 9.4e-102 374.4 277 62.8
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.2e-101 374.0 320 57.2
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.2e-101 374.0 324 55.9
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.6e-101 373.6 318 56.3
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.1e-101 373.2 319 55.8
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 3.6e-101 372.5 280 60.7
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 3.6e-101 372.5 280 61.1
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 7.9e-101 371.3 318 57.2
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.4e-100 370.5 319 56.4
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 8.8e-100 367.9 280 60.0
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 8.8e-100 367.9 274 60.6
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.1e-99 367.5 276 60.1
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.5e-99 366.3 343 52.5
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 4.3e-99 365.5 343 52.5
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 5.7e-99 365.2 276 61.2
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.7e-99 365.2 282 57.8
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.3e-98 364.0 318 55.3
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.3e-98 364.0 278 59.4
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.3e-98 364.0 278 59.4
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.2e-98 363.2 282 57.4
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 6.3e-98 361.7 349 52.1
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 6.3e-98 361.7 282 56.7
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 6.3e-98 361.7 280 59.3
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.1e-97 360.9 282 57.8
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.1e-97 360.9 282 57.1
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-97 360.5 282 56.7
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 9.1e-97 357.8 316 54.7
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.2e-96 357.5 343 54.8
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.0e-96 356.7 280 59.6
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 4.5e-96 355.5 312 55.1
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.0e-95 354.4 298 56.4
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 2.2e-95 353.2 274 59.9
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.2e-95 353.2 320 55.6
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 3.8e-95 352.4 277 59.9
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.0e-95 352.1 312 54.8
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 8.5e-95 351.3 318 54.4
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.4e-94 350.5 353 50.4
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 3.2e-94 349.4 335 54.0
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.2e-94 349.0 296 57.4
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.5e-94 348.6 264 56.4
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 7.2e-94 348.2 280 57.5
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.6e-93 347.1 320 54.1
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 2.7e-93 346.3 305 55.1
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 3.6e-93 345.9 321 52.3
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 6.1e-93 345.1 277 58.1
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 7.9e-93 344.7 289 57.8
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 1.0e-92 344.4 281 56.2
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.4e-92 344.0 320 53.1
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 3.0e-92 342.8 333 49.5
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 8.8e-92 341.3 311 52.1
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.1e-91 340.9 333 49.2
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 3.3e-91 339.3 313 53.7
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 4.4e-91 339.0 333 48.9
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 9.7e-91 337.8 318 52.8
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 6.3e-90 335.1 319 53.6
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 6.3e-90 335.1 277 55.6
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.4e-89 334.0 294 54.4
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 2.4e-89 333.2 327 53.2
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 3.5e-88 329.3 246 59.3
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 4.5e-88 328.9 282 55.7
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.7e-87 327.0 318 51.3
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 6.5e-87 325.1 320 51.2
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 1.4e-86 323.9 288 55.9
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 1.4e-86 323.9 320 51.6
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.4e-84 317.4 273 55.3
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 7.0e-81 305.1 282 52.1
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 3.5e-80 302.8 362 43.4
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 4.5e-80 302.4 279 53.8
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 3.8e-79 299.3 277 52.0
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 3.7e-74 282.7 241 55.2
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 5.3e-73 278.9 277 50.2
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 5.3e-73 278.9 280 48.6
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.0e-72 276.9 245 52.7
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.3e-71 274.2 283 49.1
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 6.5e-71 271.9 279 45.9
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 1.9e-70 270.4 330 43.9
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 2.7e-69 266.5 212 55.7
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.0e-68 264.6 191 62.8
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 1.7e-66 257.3 181 65.2
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 4.8e-66 255.8 192 62.5
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 8.3e-66 255.0 257 49.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 7.0e-65 251.9 306 44.4
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 2.7e-64 250.0 192 60.9
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 6.6e-63 245.4 325 44.0
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 6.6e-63 245.4 314 43.0
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 5.2e-60 235.7 280 42.5
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 3.4e-59 233.0 293 42.3
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 5.4e-57 225.7 313 39.6
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 7.0e-57 225.3 249 43.0
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.5e-54 216.9 282 42.2
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 4.7e-53 212.6 191 50.3
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.4e-52 211.1 192 54.2
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 8.9e-52 208.4 284 41.2
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 1.5e-51 207.6 123 78.9
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 5.4e-49 199.1 209 49.8
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 1.1e-46 191.4 324 34.0
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.5e-46 191.0 316 34.2
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.2e-45 188.0 194 46.4
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 3.6e-45 186.4 282 37.2
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.1e-44 183.3 165 52.7
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 2.2e-42 177.2 266 38.3
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 4.9e-42 176.0 126 60.3
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.4e-41 173.7 205 46.8
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 5.4e-41 172.6 119 67.2
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 1.2e-40 171.4 260 36.2
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.0e-39 168.3 134 58.2
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 3.3e-38 163.3 278 35.3
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.2e-35 154.8 121 59.5
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.9e-34 150.2 126 54.8
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 7.1e-33 145.6 121 53.7
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 7.8e-32 142.1 164 45.7
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.1e-30 138.3 121 51.2
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 1.8e-28 131.0 106 56.6
VMungo0331G1881 Vigna mungo HOM05D000590 ORTHO05D006825 1.8e-20 104.4 141 40.4
PSO210G5020 Papaver somniferum HOM05D001459 ORTHO05D003498 1.2e-19 101.7 51 86.3
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.0e-19 100.9 80 53.8
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 2.9e-18 97.1 186 33.9
Lalb_Chr10g0100501 Lupinus albus HOM05D000590 ORTHO05D006825 2.9e-18 97.1 114 44.7
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 5.4e-17 92.8 66 68.2
GSVIVG01027101001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.0e-16 89.4 71 57.7
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 6.6e-15 85.9 73 54.8
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 6.6e-15 85.9 60 60.0
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 1.3e-13 81.6 198 34.8
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.2e-13 79.3 64 53.1
Zm00001eb119810 Zea mays HOM05D000590 ORTHO05D006825 3.4e-11 73.6 93 39.8
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 2.9e-10 70.5 50 46.0
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 4.9e-10 69.7 65 58.5
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 4.9e-10 69.7 103 36.9
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 1.9e-06 57.8 44 59.1


User provided reference genes

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