Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3516 Papaver somniferum HOM05D064671 ORTHO05D004092 0.0e+00 1165.2 699 100.0
PSO478G2886 Papaver somniferum HOM05D064671 ORTHO05D004092 5.2e-293 1010.7 719 85.5
PSO478G0660 Papaver somniferum HOM05D057890 ORTHO05D004092 1.5e-45 188.7 383 40.2
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 2.1e-44 184.9 460 37.4
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 5.5e-40 170.2 466 34.3
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 6.9e-27 126.7 369 32.5
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 1.1e-16 92.8 214 39.3
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 1.4e-16 92.4 358 31.0
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 3.2e-16 91.3 249 35.3
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 1.6e-15 89.0 366 29.2
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.8e-14 85.5 375 30.4
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 2.3e-14 85.1 339 31.0
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 1.5e-13 82.4 263 33.1
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 4.4e-13 80.9 308 29.9
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 5.7e-13 80.5 231 35.5
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 5.7e-13 80.5 309 29.4
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 7.4e-13 80.1 285 30.2
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 9.7e-13 79.7 232 36.6
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 1.3e-12 79.3 280 35.7
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 3.7e-12 77.8 307 30.9
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 3.7e-12 77.8 232 31.0
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.7e-12 77.8 280 35.0
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 6.3e-12 77.0 209 37.3
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 8.2e-12 76.6 320 31.2
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 1.1e-11 76.3 318 30.8
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.4e-11 75.9 323 32.5
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 2.4e-11 75.1 353 28.3
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 3.1e-11 74.7 268 33.6
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.1e-11 74.3 280 34.6
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 5.3e-11 73.9 238 34.5
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 7.0e-11 73.6 238 34.0
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 9.1e-11 73.2 310 31.0
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 9.1e-11 73.2 322 32.6
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 9.1e-11 73.2 265 33.2
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.2e-10 72.8 323 31.6
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.2e-10 72.8 238 34.0
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 1.2e-10 72.8 304 29.9
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 1.2e-10 72.8 363 29.8
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.5e-10 72.4 282 29.8
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.0e-10 72.0 310 30.6
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 2.6e-10 71.6 214 34.1
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 4.5e-10 70.9 233 33.5
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.0e-09 69.7 249 32.5
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 1.3e-09 69.3 239 32.2
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 2.2e-09 68.6 275 31.6
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.9e-09 68.2 304 29.9
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.9e-09 68.2 191 34.6
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 3.8e-09 67.8 296 31.4
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 5.0e-09 67.4 242 30.6
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 6.5e-09 67.0 352 28.1
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 8.5e-09 66.6 277 31.8
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 1.1e-08 66.2 390 27.9
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 1.1e-08 66.2 216 33.8
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 1.1e-08 66.2 352 29.0
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 1.5e-08 65.9 279 29.0
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 1.9e-08 65.5 313 26.8
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 1.9e-08 65.5 191 34.0
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.9e-08 65.5 280 32.5
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 2.5e-08 65.1 199 33.2
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 2.5e-08 65.1 312 26.6
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 5.5e-08 63.9 193 32.6
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.6e-07 62.4 134 38.8
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 1.6e-07 62.4 315 30.5
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 3.6e-07 61.2 253 29.6
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 6.1e-07 60.5 195 33.8
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 8.0e-07 60.1 258 32.6
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 1.0e-06 59.7 120 38.3
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 1.4e-06 59.3 163 34.4
Aa31LG7G12260 Aethionema arabicum HOM05D004189 ORTHO05D004092 2.3e-06 58.5 157 36.3
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 3.9e-06 57.8 97 41.2
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 3.9e-06 57.8 315 27.9
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.9e-06 57.8 181 32.0
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 5.2e-06 57.4 272 28.7
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 6.7e-06 57.0 235 28.9


User provided reference genes

Program Settings