Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 4.4e-135 484.6 235 100.0
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.7e-126 456.1 229 96.1
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 8.6e-123 443.7 229 94.3
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.3e-99 366.7 223 81.6
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 5.1e-99 364.8 223 80.7
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 3.3e-98 362.1 222 78.8
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 4.3e-98 361.7 221 80.5
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 6.2e-97 357.8 222 79.7
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 5.3e-96 354.8 232 74.6
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 2.6e-95 352.4 222 77.9
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.3e-94 350.1 226 77.4
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.7e-94 349.7 227 76.2
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 2.2e-94 349.4 231 73.2
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.2e-94 349.4 233 73.0
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 2.2e-94 349.4 222 77.9
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.9e-94 349.0 226 75.2
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 3.8e-94 348.6 229 74.2
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 3.8e-94 348.6 222 76.6
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 6.4e-94 347.8 235 71.5
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 6.4e-94 347.8 222 76.6
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 8.4e-94 347.4 221 76.9
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 8.4e-94 347.4 222 75.7
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 8.4e-94 347.4 229 77.3
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 3.2e-93 345.5 226 75.7
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 3.2e-93 345.5 227 75.8
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 5.4e-93 344.7 222 76.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.6e-92 343.2 227 72.2
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 2.1e-92 342.8 219 75.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 2.7e-92 342.4 226 73.5
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 2.7e-92 342.4 219 76.7
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 2.7e-92 342.4 219 75.8
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 2.7e-92 342.4 227 73.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 3.5e-92 342.0 230 72.6
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 6.0e-92 341.3 222 76.1
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 1.0e-91 340.5 234 71.8
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.0e-91 340.5 231 73.2
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.0e-91 340.5 232 72.8
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.7e-91 339.7 229 72.5
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 2.3e-91 339.3 218 77.1
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 3.0e-91 339.0 221 74.2
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 5.1e-91 338.2 227 73.6
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 5.1e-91 338.2 226 72.6
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 5.1e-91 338.2 228 72.4
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 8.7e-91 337.4 221 75.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 8.7e-91 337.4 221 75.6
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 8.7e-91 337.4 230 73.5
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.1e-90 337.0 227 74.0
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.1e-90 337.0 222 73.0
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.9e-90 336.3 222 74.3
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.5e-90 335.9 227 73.1
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 2.5e-90 335.9 234 70.9
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.5e-90 335.9 221 75.6
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 3.3e-90 335.5 227 73.6
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 3.3e-90 335.5 228 71.9
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 4.3e-90 335.1 235 71.1
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.6e-90 334.7 221 75.1
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 5.6e-90 334.7 219 74.4
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 5.6e-90 334.7 227 71.8
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 7.4e-90 334.3 222 71.6
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 7.4e-90 334.3 229 71.2
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 9.6e-90 334.0 228 71.5
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 1.3e-89 333.6 217 75.1
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.3e-89 333.6 234 71.8
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 1.3e-89 333.6 222 74.8
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.6e-89 333.2 219 73.5
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 8.1e-89 330.9 221 72.4
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.1e-88 330.5 221 74.7
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.1e-88 330.5 222 74.3
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.8e-88 329.7 221 71.9
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 1.8e-88 329.7 221 71.9
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 3.1e-88 328.9 222 72.5
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 4.0e-88 328.6 222 72.5
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 5.3e-88 328.2 221 73.3
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 2.6e-87 325.9 221 70.1
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 3.4e-87 325.5 219 73.1
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 5.8e-87 324.7 222 72.1
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 7.6e-87 324.3 234 70.5
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 9.9e-87 323.9 232 69.4
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 3.8e-86 322.0 222 68.9
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 8.4e-86 320.9 232 67.7
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 8.4e-86 320.9 219 71.2
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.1e-85 320.5 219 71.7
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 1.9e-85 319.7 219 72.1
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.9e-85 319.7 219 71.7
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 4.2e-85 318.5 220 69.5
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 9.3e-85 317.4 217 70.0
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 6.0e-84 314.7 217 70.5
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 7.9e-84 314.3 219 69.9
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 7.9e-84 314.3 219 70.3
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.8e-83 313.2 219 68.9
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.8e-83 313.2 230 67.4
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.8e-83 313.2 230 67.4
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.8e-83 313.2 230 67.4
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 2.3e-83 312.8 219 69.9
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 4.3e-82 308.5 231 65.4
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 9.6e-82 307.4 215 68.4
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 2.8e-81 305.8 219 68.5
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.8e-81 305.1 228 66.7
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 4.8e-81 305.1 219 68.0
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 4.8e-81 305.1 217 71.0
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.8e-80 303.1 231 64.5
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 2.4e-80 302.8 231 64.1
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.4e-80 302.8 214 69.2
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 2.0e-79 299.7 214 68.7
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 3.4e-79 298.9 218 65.6
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 3.4e-79 298.9 218 65.6
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 3.4e-79 298.9 218 65.6
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 5.8e-79 298.1 222 65.3
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 7.9e-76 287.7 212 66.0
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 1.8e-75 286.6 231 61.0
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 3.9e-75 285.4 213 66.7
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 8.7e-75 284.3 214 63.1
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 2.0e-71 273.1 213 62.4
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 2.6e-71 272.7 234 62.8
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.0e-70 270.8 224 57.6
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 2.2e-70 269.6 216 59.7
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.2e-70 269.6 219 62.1
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.1e-68 263.1 182 70.9
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 3.9e-59 232.3 188 63.3
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 1.7e-54 216.9 166 66.3
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 4.2e-45 185.7 217 43.8
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 3.6e-44 182.6 181 55.8
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 4.7e-44 182.2 100 85.0
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 3.1e-40 169.5 147 61.2
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.0e-34 150.2 116 68.1
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 9.1e-32 141.4 196 41.3
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 1.9e-29 133.7 177 41.8
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 7.5e-26 121.7 100 63.0
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.3e-13 79.3 49 71.4
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 6.2e-12 75.5 44 75.0
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 8.6e-06 55.1 39 61.5


User provided reference genes

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