Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3355 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-82 309.7 148 100.0
PSO017G4348 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-58 229.9 144 77.8
PSO339G3221 Papaver somniferum HOM05D007979 ORTHO05D008897 6.3e-55 217.6 138 74.6
PSO063G0850 Papaver somniferum HOM05D007979 ORTHO05D008897 8.2e-55 217.2 148 70.9
PSO017G5341 Papaver somniferum HOM05D000003 ORTHO05D008897 1.5e-51 206.5 138 69.6
PSO170G4211 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-51 206.1 134 72.4
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 3.2e-51 205.3 138 71.0
PSO357G0645 Papaver somniferum HOM05D007979 ORTHO05D008897 9.4e-51 203.8 133 71.4
PSO170G0252 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-50 203.4 135 69.6
PSO339G3527 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-50 203.4 134 71.6
PSO339G3875 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-50 203.4 132 72.7
PSO675G5504 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-50 203.0 137 70.8
PSO541G5765 Papaver somniferum HOM05D007979 ORTHO05D008897 2.7e-50 202.2 134 73.1
PSO063G5374 Papaver somniferum HOM05D007979 ORTHO05D008897 4.7e-50 201.4 138 68.8
PSO063G1625 Papaver somniferum HOM05D007979 ORTHO05D008897 6.1e-50 201.1 132 72.0
PSO170G1159 Papaver somniferum HOM05D007979 ORTHO05D008897 6.1e-50 201.1 138 70.3
PSO675G6649 Papaver somniferum HOM05D007979 ORTHO05D008897 6.1e-50 201.1 129 76.0
PSO801G0486 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-49 199.9 136 71.3
PSO782G1141 Papaver somniferum HOM05D000003 ORTHO05D008897 1.8e-49 199.5 138 68.8
PSO210G4702 Papaver somniferum HOM05D000003 ORTHO05D008897 3.0e-49 198.7 138 68.8
PSO478G2646 Papaver somniferum HOM05D007979 ORTHO05D008897 6.8e-49 197.6 134 70.1
PSO761G0359 Papaver somniferum HOM05D007979 ORTHO05D008897 8.8e-49 197.2 136 70.6
PSO832G1876 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-48 196.8 138 68.1
PSO017G2467 Papaver somniferum HOM05D007979 ORTHO05D008897 2.6e-48 195.7 132 72.0
PSO339G4879 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-48 194.9 134 67.9
PSO675G4314 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-48 194.9 136 70.6
PSO170G2889 Papaver somniferum HOM05D007979 ORTHO05D008897 9.8e-48 193.7 138 68.1
PSO675G6329 Papaver somniferum HOM05D007979 ORTHO05D008897 9.8e-48 193.7 138 68.8
PSO210G2752 Papaver somniferum HOM05D007979 ORTHO05D008897 1.3e-47 193.4 135 66.7
PSO210G3341 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-47 193.0 138 68.8
PSO478G1683 Papaver somniferum HOM05D007979 ORTHO05D008897 2.2e-47 192.6 138 68.1
PSO541G4066 Papaver somniferum HOM05D007979 ORTHO05D008897 2.8e-47 192.2 130 73.1
PSO675G8252 Papaver somniferum HOM05D000003 ORTHO05D008897 2.8e-47 192.2 138 67.4
PSO210G0381 Papaver somniferum HOM05D007979 ORTHO05D008897 3.7e-47 191.8 138 68.1
PSO754G0062 Papaver somniferum HOM05D000003 ORTHO05D008897 3.7e-47 191.8 138 65.2
PSO017G6421 Papaver somniferum HOM05D007979 ORTHO05D008897 6.3e-47 191.0 128 72.7
PSO067G0070 Papaver somniferum HOM05D007979 ORTHO05D008897 6.3e-47 191.0 134 67.2
PSO017G6016 Papaver somniferum HOM05D007979 ORTHO05D008897 8.3e-47 190.7 138 67.4
PSO478G5116 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-46 189.9 138 68.1
PSO210G4325 Papaver somniferum HOM05D007979 ORTHO05D008897 1.8e-46 189.5 138 67.4
PSO210G7093 Papaver somniferum HOM05D000003 ORTHO05D008897 1.8e-46 189.5 127 70.9
PSO675G4940 Papaver somniferum HOM05D007979 ORTHO05D008897 2.4e-46 189.1 136 66.9
PSO832G0628 Papaver somniferum HOM05D000003 ORTHO05D008897 2.4e-46 189.1 130 66.9
PSO832G2489 Papaver somniferum HOM05D000003 ORTHO05D008897 2.4e-46 189.1 135 64.4
PSO339G4256 Papaver somniferum HOM05D007979 ORTHO05D008897 3.1e-46 188.7 136 68.4
PSO017G3465 Papaver somniferum HOM05D007979 ORTHO05D008897 4.1e-46 188.3 138 63.8
PSO339G1461 Papaver somniferum HOM05D000003 ORTHO05D008897 5.4e-46 188.0 138 66.7
PSO210G5156 Papaver somniferum HOM05D007979 ORTHO05D008897 7.0e-46 187.6 135 68.9
PSO724G0871 Papaver somniferum HOM05D000003 ORTHO05D008897 1.2e-45 186.8 135 63.7
PSO017G6947 Papaver somniferum HOM05D007979 ORTHO05D008897 3.5e-45 185.3 137 65.7
PSO832G3588 Papaver somniferum HOM05D000003 ORTHO05D008897 4.5e-45 184.9 135 68.1
PSO210G4179 Papaver somniferum HOM05D007979 ORTHO05D008897 5.9e-45 184.5 142 62.7
PSO532G0074 Papaver somniferum HOM05D007979 ORTHO05D008897 5.9e-45 184.5 135 64.4
PSO210G4965 Papaver somniferum HOM05D000003 ORTHO05D008897 1.3e-44 183.3 128 66.4
PSO017G1742 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-44 183.0 138 66.7
PSO339G4730 Papaver somniferum HOM05D007979 ORTHO05D008897 1.7e-44 183.0 138 65.9
PSO170G5060 Papaver somniferum HOM05D007979 ORTHO05D008897 2.3e-44 182.6 138 65.2
PSO384G0920 Papaver somniferum HOM05D007979 ORTHO05D008897 2.5e-43 179.1 132 64.4
PSO384G2932 Papaver somniferum HOM05D007979 ORTHO05D008897 5.5e-43 177.9 136 65.4
PSO801G0711 Papaver somniferum HOM05D007979 ORTHO05D008897 9.5e-43 177.2 139 60.4
PSO675G5058 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-42 176.4 138 60.9
PSO170G2725 Papaver somniferum HOM05D007979 ORTHO05D008897 3.6e-42 175.3 139 61.2
PSO541G0739 Papaver somniferum HOM05D007979 ORTHO05D008897 3.6e-42 175.3 134 63.4
PSO339G3764 Papaver somniferum HOM05D007979 ORTHO05D008897 5.2e-41 171.4 128 62.5
PSO135G0902 Papaver somniferum HOM05D000003 ORTHO05D008897 1.4e-38 163.3 122 68.0
PSO210G6716 Papaver somniferum HOM05D007979 ORTHO05D008897 6.6e-36 154.5 118 65.3
PSO782G1026 Papaver somniferum HOM05D007979 ORTHO05D008897 1.5e-35 153.3 135 57.0
PSO782G4239 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-34 149.8 135 56.3
PSO017G1412 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-32 143.3 134 53.0
PSO339G0335 Papaver somniferum HOM05D007979 ORTHO05D008897 2.6e-32 142.5 111 63.1
PSO170G0727 Papaver somniferum HOM05D007979 ORTHO05D008897 5.8e-32 141.4 96 72.9
PSO700G0154 Papaver somniferum HOM05D007979 ORTHO05D008897 9.8e-32 140.6 106 63.2
PSO541G3839 Papaver somniferum HOM05D007979 ORTHO05D008897 4.9e-31 138.3 112 63.4
PSO801G0709 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-30 137.1 121 59.5
PSO700G0281 Papaver somniferum HOM05D007979 ORTHO05D008897 1.9e-30 136.3 107 59.8
PSO782G3767 Papaver somniferum HOM05D000003 ORTHO05D008897 5.4e-30 134.8 94 67.0
PSO782G5668 Papaver somniferum HOM05D007979 ORTHO05D008897 1.2e-29 133.7 85 74.1
PSO063G1555 Papaver somniferum HOM05D007979 ORTHO05D008897 7.3e-27 124.4 85 68.2
PSO170G1528 Papaver somniferum HOM05D007979 ORTHO05D008897 1.1e-25 120.6 76 71.1
PSO339G5548 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-23 112.1 81 65.4
PSO063G3744 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-23 110.9 92 57.6
PSO478G2897 Papaver somniferum HOM05D007979 ORTHO05D008897 2.4e-22 109.4 78 65.4
PSO063G2188 Papaver somniferum HOM05D000003 ORTHO05D000004 3.5e-21 105.5 76 68.4
PSO210G2896 Papaver somniferum HOM05D007979 ORTHO05D008897 1.5e-19 100.1 81 59.3
PSO541G5834 Papaver somniferum HOM05D007979 ORTHO05D008897 6.2e-18 94.7 57 78.9
PSO674G0111 Papaver somniferum HOM05D007979 ORTHO05D008897 2.6e-16 89.4 57 70.2
PSO210G0775 Papaver somniferum HOM05D007979 ORTHO05D008897 3.4e-16 89.0 135 37.0
PSO675G3290 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-16 88.6 57 68.4
PSO063G7628 Papaver somniferum HOM05D000003 ORTHO05D008897 1.7e-15 86.7 53 73.6
PSO210G6702 Papaver somniferum HOM05D007979 ORTHO05D008897 1.6e-13 80.1 138 34.8
PSO170G5786 Papaver somniferum HOM05D007979 ORTHO05D008897 4.6e-13 78.6 53 69.8
PSO339G1991 Papaver somniferum HOM05D007979 ORTHO05D008897 4.6e-13 78.6 132 33.3
PSO339G2341 Papaver somniferum HOM05D000003 ORTHO05D008897 8.6e-12 74.3 44 72.7
Aqoxy1G03074 Aquilegia oxysepala HOM05D000068 ORTHO05D008897 4.3e-11 72.0 131 33.6
Aqoxy1G02620 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.3e-11 71.2 132 34.8
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 4.7e-10 68.6 132 34.8
Aqoxy2G00807 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 4.7e-10 68.6 132 34.1
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 3.1e-09 65.9 133 33.1
Aqoxy7G02473 Aquilegia oxysepala HOM05D014518 ORTHO05D008897 8.9e-09 64.3 131 33.6
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 1.5e-08 63.5 129 37.2
Atru.chr8.838 Acer truncatum HOM05D000003 ORTHO05D000167 2.0e-08 63.2 133 33.1
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 3.4e-08 62.4 132 35.6
Atru.chr8.816 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-08 62.4 133 33.8
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 3.4e-08 62.4 129 36.4
PSO675G3281 Papaver somniferum HOM05D000003 ORTHO05D001026 4.4e-08 62.0 130 33.8
PSO541G4893 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-08 61.6 37 81.1
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 9.9e-08 60.8 133 35.3
QL05p082309 Quercus lobata HOM05D000003 ORTHO05D011877 9.9e-08 60.8 128 33.6
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 9.9e-08 60.8 132 29.5
Aqoxy2G02194 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.3e-07 60.5 146 30.8
Sed0012627 Sechium edule HOM05D000003 ORTHO05D000004 1.7e-07 60.1 133 31.6
Atru.chr9.887 Acer truncatum HOM05D000003 ORTHO05D000006 2.2e-07 59.7 135 34.8
PSO302G0021 Papaver somniferum HOM05D000003 ORTHO05D001026 2.2e-07 59.7 137 32.1
RcHm_v2.0_Chr5g0012401 Rosa chinensis HOM05D000003 ORTHO05D010713 2.2e-07 59.7 133 30.1
Prupe.3G283300 Prunus persica HOM05D000003 ORTHO05D000167 2.9e-07 59.3 138 29.7
Gorai.009G352100 Gossypium raimondii HOM05D008766 ORTHO05D010886 3.8e-07 58.9 134 33.6
Lj2g0023475 Lotus japonicus HOM05D000003 ORTHO05D007254 3.8e-07 58.9 132 31.1
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 4.9e-07 58.5 125 34.4
RcHm_v2.0_Chr4g0415961 Rosa chinensis HOM05D000003 ORTHO05D000167 4.9e-07 58.5 130 30.8
Gorai.013G190000 Gossypium raimondii HOM05D008766 ORTHO05D010886 8.4e-07 57.8 128 32.0
MBI08_g18896_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 8.4e-07 57.8 78 37.2
PSO063G0794 Papaver somniferum HOM05D000003 ORTHO05D001026 8.4e-07 57.8 139 33.1
PSO443G0037 Papaver somniferum HOM05D000003 ORTHO05D001026 8.4e-07 57.8 139 28.1
PSO675G0069 Papaver somniferum HOM05D000003 ORTHO05D001026 8.4e-07 57.8 135 30.4
Aqoxy5G02730 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 1.1e-06 57.4 134 29.1
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.1e-06 57.4 140 33.6
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 1.1e-06 57.4 143 28.0
PSO443G0019 Papaver somniferum HOM05D000003 ORTHO05D001026 1.1e-06 57.4 129 31.8
BolC8t51211H Brassica oleracea HOM05D004976 ORTHO05D004851 1.4e-06 57.0 126 31.0
Atru.chr12.1749 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-06 56.6 144 30.6
Atru.chr6.710 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-06 56.6 109 33.9
Aqoxy4G01791 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-06 56.6 141 29.1
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.9e-06 56.6 138 29.0
FvH4_6g18902 Fragaria vesca HOM05D000003 ORTHO05D010713 1.9e-06 56.6 143 31.5
PSO170G4716 Papaver somniferum HOM05D000003 ORTHO05D001026 1.9e-06 56.6 84 36.9
Prupe.7G076800 Prunus persica HOM05D000003 ORTHO05D000167 1.9e-06 56.6 138 30.4
Atru.chr13.1037 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 56.2 135 33.3
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 2.4e-06 56.2 146 30.1
PSO210G0917 Papaver somniferum HOM05D000003 ORTHO05D001026 2.4e-06 56.2 138 31.2
PSO384G0532 Papaver somniferum HOM05D000003 ORTHO05D001026 2.4e-06 56.2 133 27.8
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 2.4e-06 56.2 137 31.4
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.2e-06 55.8 140 33.6
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 3.2e-06 55.8 141 27.7
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-06 55.5 132 33.3
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 4.2e-06 55.5 129 28.7
AUR62005037 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.2e-06 55.5 129 32.6
PSO761G0686 Papaver somniferum HOM05D007979 ORTHO05D008897 4.2e-06 55.5 115 33.0
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 4.2e-06 55.5 134 28.4
Atru.chr2.2051 Acer truncatum HOM05D000003 ORTHO05D000167 5.4e-06 55.1 130 33.1
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 5.4e-06 55.1 129 28.7
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.4e-06 55.1 137 29.2
PSO754G0051 Papaver somniferum HOM05D000003 ORTHO05D008897 5.4e-06 55.1 29 75.9
QL11p039844 Quercus lobata HOM05D000003 ORTHO05D011877 5.4e-06 55.1 133 34.6
Sed0018752 Sechium edule HOM05D000003 ORTHO05D000167 5.4e-06 55.1 131 30.5
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 7.1e-06 54.7 143 30.8
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 7.1e-06 54.7 87 37.9
PSO528G0073 Papaver somniferum HOM05D003407 ORTHO05D001026 7.1e-06 54.7 136 27.9
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 7.1e-06 54.7 130 26.9
AT2G34320 Arabidopsis thaliana HOM05D000003 ORTHO05D001091 9.2e-06 54.3 130 30.0
BolC4t25971H Brassica oleracea HOM05D001239 ORTHO05D000925 9.2e-06 54.3 131 32.8


User provided reference genes

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