Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3353 Papaver somniferum HOM05D003319 ORTHO05D003739 8.6e-174 613.6 321 100.0
PSO478G3694 Papaver somniferum HOM05D003319 ORTHO05D003739 6.0e-135 484.6 374 73.8
PSO478G2921 Papaver somniferum HOM05D003319 ORTHO05D003739 9.0e-123 444.1 375 68.8
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 1.1e-72 277.7 388 49.5
PSO170G3999 Papaver somniferum HOM05D003319 ORTHO05D003739 3.2e-72 276.2 388 49.7
PSO478G0048 Papaver somniferum HOM05D003319 ORTHO05D003739 3.2e-72 276.2 446 43.9
PSO478G0452 Papaver somniferum HOM05D003319 ORTHO05D003739 8.3e-60 235.0 378 45.8
PSO782G3079 Papaver somniferum HOM05D003319 ORTHO05D003739 6.4e-52 208.8 278 48.2
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 9.2e-51 204.9 474 36.3
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 4.6e-50 202.6 474 36.7
PSO478G0631 Papaver somniferum HOM05D003319 ORTHO05D003739 1.6e-47 194.1 155 65.8
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 1.1e-46 191.4 440 36.6
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 5.8e-45 185.7 452 36.1
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 1.3e-44 184.5 467 36.6
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 1.1e-43 181.4 402 38.1
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 1.4e-43 181.0 451 36.1
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 3.2e-43 179.9 456 33.3
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 9.2e-43 178.3 444 34.2
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 2.7e-42 176.8 481 33.7
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 1.1e-40 171.4 439 34.4
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 7.3e-40 168.7 429 36.1
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 1.6e-39 167.5 430 34.9
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 4.7e-39 166.0 378 36.8
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 1.4e-38 164.5 287 40.1
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.8e-38 164.1 362 37.0
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 3.1e-38 163.3 448 34.8
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 3.1e-38 163.3 290 37.9
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 4.0e-38 162.9 362 36.7
ATR0582G130 Amborella trichopoda HOM05D003319 ORTHO05D003739 5.2e-38 162.5 377 36.1
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 6.8e-38 162.2 458 34.3
CSS0018207 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 1.2e-37 161.4 226 45.1
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 1.2e-37 161.4 342 36.5
Cpa.g.sc21.26 Carica papaya HOM05D003319 ORTHO05D003739 1.5e-37 161.0 371 36.4
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.6e-37 160.2 431 34.3
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 3.4e-37 159.8 424 34.7
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 9.9e-37 158.3 420 35.5
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 1.3e-36 157.9 320 40.6
Gohir.D01G114100 Gossypium hirsutum HOM05D003319 ORTHO05D003739 1.7e-36 157.5 287 37.6
Gorai.002G139000 Gossypium raimondii HOM05D003319 ORTHO05D003739 1.7e-36 157.5 287 37.6
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 2.9e-36 156.8 316 37.7
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 2.9e-36 156.8 395 34.2
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.9e-36 156.8 431 33.9
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 1.1e-35 154.8 293 39.6
Gohir.A01G126500 Gossypium hirsutum HOM05D003319 ORTHO05D003739 1.1e-35 154.8 287 37.3
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 1.9e-35 154.1 286 39.9
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 5.4e-35 152.5 363 33.6
ECA246G1786 Erigeron canadensis HOM05D003319 ORTHO05D003739 9.2e-35 151.8 400 35.0
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 1.2e-34 151.4 415 33.0
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 1.2e-34 151.4 439 32.8
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 1.6e-34 151.0 363 34.4
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 1.6e-34 151.0 312 34.3
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 3.5e-34 149.8 361 36.8
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 3.5e-34 149.8 381 36.0
Sabra05G0119500 Salix brachista HOM05D003319 ORTHO05D003739 1.3e-33 147.9 229 40.6
Lj1g0027025 Lotus japonicus HOM05D003319 ORTHO05D003739 2.3e-33 147.1 317 34.7
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 5.1e-33 146.0 289 38.8
Lalb_Chr23g0270031 Lupinus albus HOM05D003319 ORTHO05D003739 5.1e-33 146.0 295 36.3
PGR031G0455 Punica granatum HOM05D003319 ORTHO05D003739 5.1e-33 146.0 421 34.0
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 8.6e-33 145.2 406 34.7
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 8.6e-33 145.2 470 31.3
Actinidia19629 Actinidia chinensis HOM05D003319 ORTHO05D003739 1.5e-32 144.4 264 40.5
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 2.5e-32 143.7 280 37.9
Sp1g08300 Schrenkiella parvula HOM05D003319 ORTHO05D003739 5.6e-32 142.5 333 33.3
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 7.3e-32 142.1 248 38.7
Lalb_Chr11g0064951 Lupinus albus HOM05D003319 ORTHO05D003739 7.3e-32 142.1 254 38.2
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 7.3e-32 142.1 332 31.9
HanXRQChr15g0484821 Helianthus annuus HOM05D003319 ORTHO05D003739 9.6e-32 141.7 423 32.9
THA.LOC104816794 Tarenaya hassleriana HOM05D003319 ORTHO05D003739 9.6e-32 141.7 348 33.6
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 1.6e-31 141.0 254 39.8
AL1G20260 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 2.1e-31 140.6 249 38.6
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 2.8e-31 140.2 368 35.3
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 3.6e-31 139.8 313 35.1
CARHR009680 Cardamine hirsuta HOM05D003319 ORTHO05D003739 4.7e-31 139.4 310 34.8
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 6.2e-31 139.0 380 34.5
BraA06t23850Z Brassica rapa HOM05D003319 ORTHO05D003739 8.1e-31 138.7 289 38.8
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 8.1e-31 138.7 455 32.5
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 8.1e-31 138.7 365 33.2
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 8.1e-31 138.7 276 37.3
Aa31LG1G5280 Aethionema arabicum HOM05D003319 ORTHO05D003739 1.4e-30 137.9 282 37.9
BolC5t29530H Brassica oleracea HOM05D003319 ORTHO05D003739 1.4e-30 137.9 285 39.3
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 1.8e-30 137.5 290 36.6
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 2.4e-30 137.1 431 32.3
BraA09t37477Z Brassica rapa HOM05D003319 ORTHO05D003739 4.0e-30 136.3 274 39.1
FvH4_5g34820 Fragaria vesca HOM05D003319 ORTHO05D003739 4.0e-30 136.3 303 35.3
arahy.Tifrunner.gnm1.ann1.53Z6YZ Arachis hypogaea HOM05D003319 ORTHO05D003739 8.9e-30 135.2 286 36.7
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 8.9e-30 135.2 300 37.3
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 8.9e-30 135.2 368 33.4
Phvul.009G036300 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 8.9e-30 135.2 290 34.8
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 1.2e-29 134.8 270 34.8
Glyma.04G095300 Glycine max HOM05D003319 ORTHO05D003739 1.5e-29 134.4 305 34.4
MD15G1386000 Malus domestica HOM05D003319 ORTHO05D003739 1.5e-29 134.4 228 39.0
AT1G09710 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 2.6e-29 133.7 285 34.7
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 2.6e-29 133.7 296 35.8
FAN13G1335 Fragaria x ananassa HOM05D003319 ORTHO05D003739 2.6e-29 133.7 298 35.6
EL10Ac1g00993 Beta vulgaris HOM05D003319 ORTHO05D003739 4.4e-29 132.9 417 32.1
BolC9t55230H Brassica oleracea HOM05D003319 ORTHO05D003739 4.4e-29 132.9 283 38.5
CARHR053790 Cardamine hirsuta HOM05D003319 ORTHO05D003739 5.8e-29 132.5 260 38.1
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 5.8e-29 132.5 203 43.8
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 5.8e-29 132.5 433 30.7
arahy.Tifrunner.gnm1.ann1.ET429J Arachis hypogaea HOM05D003319 ORTHO05D003739 7.6e-29 132.1 253 37.5
C05p07790 Brassica napus HOM05D003319 ORTHO05D003739 7.6e-29 132.1 324 36.1
Migut.F01437 Erythranthe guttata HOM05D003319 ORTHO05D003739 9.9e-29 131.7 364 29.9
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.3e-28 131.3 414 34.3
VMungo1309G1101 Vigna mungo HOM05D003319 ORTHO05D003739 1.3e-28 131.3 281 35.6
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 1.7e-28 131.0 408 32.6
HanXRQChr05g0163341 Helianthus annuus HOM05D003319 ORTHO05D003739 2.2e-28 130.6 407 32.7
Sp2g05390 Schrenkiella parvula HOM05D003319 ORTHO05D003739 2.2e-28 130.6 361 33.8
AUR62019092 Chenopodium quinoa HOM05D003319 ORTHO05D003739 3.8e-28 129.8 425 32.2
FAN18G0012 Fragaria x ananassa HOM05D003319 ORTHO05D003739 3.8e-28 129.8 229 39.3
FAN08G0387 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.9e-28 129.4 358 32.4
A06p06390 Brassica napus HOM05D003319 ORTHO05D003739 8.4e-28 128.6 276 37.3
Carub.0001s0905 Capsella rubella HOM05D003319 ORTHO05D003739 8.4e-28 128.6 314 34.4
FAN04G1055 Fragaria x ananassa HOM05D003319 ORTHO05D003739 8.4e-28 128.6 260 36.5
Lalb_Chr08g0242551 Lupinus albus HOM05D003319 ORTHO05D003739 8.4e-28 128.6 300 35.0
arahy.Tifrunner.gnm1.ann1.S3SE83 Arachis hypogaea HOM05D003319 ORTHO05D003739 1.1e-27 128.3 279 34.8
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 1.9e-27 127.5 320 34.7
arahy.Tifrunner.gnm1.ann1.J3DRUP Arachis hypogaea HOM05D003319 ORTHO05D003739 4.2e-27 126.3 281 34.2
Carub.0002s0638 Capsella rubella HOM05D003319 ORTHO05D003739 4.2e-27 126.3 350 32.0
AT1G58220 Arabidopsis thaliana HOM05D003319 ORTHO05D003739 5.4e-27 125.9 287 35.9
MELO3C011083.2 Cucumis melo HOM05D003319 ORTHO05D003739 5.4e-27 125.9 227 37.0
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 5.4e-27 125.9 388 31.4
TPR.G6339 Trifolium pratense HOM05D003319 ORTHO05D003739 2.7e-26 123.6 258 32.9
A09p18510 Brassica napus HOM05D003319 ORTHO05D003739 3.5e-26 123.2 375 34.7
Glyma.02G214600 Glycine max HOM05D003319 ORTHO05D003739 3.5e-26 123.2 247 36.0
Aqoxy5G01379 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 4.6e-26 122.9 415 31.3
Medtr8g024690 Medicago truncatula HOM05D003319 ORTHO05D003739 6.0e-26 122.5 286 32.5
BcaC04g22121 Brassica carinata HOM05D003319 ORTHO05D003739 1.0e-25 121.7 374 34.8
C09p23120 Brassica napus HOM05D003319 ORTHO05D003739 1.0e-25 121.7 374 34.8
Migut.A00432 Erythranthe guttata HOM05D003319 ORTHO05D003739 2.3e-25 120.6 398 31.4
Aa31LG2G10920 Aethionema arabicum HOM05D003319 ORTHO05D003739 3.0e-25 120.2 279 33.7
VMungo0647G1715 Vigna mungo HOM05D003319 ORTHO05D003739 3.0e-25 120.2 219 38.4
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 5.1e-25 119.4 225 37.3
Ca_23436_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 6.6e-25 119.0 279 34.4
Psat5g049040 Pisum sativum HOM05D003319 ORTHO05D003739 6.6e-25 119.0 285 31.9
Thhalv10024079m.g Eutrema salsugineum HOM05D003319 ORTHO05D003739 8.7e-25 118.6 357 32.5
HPP92_016140 Vanilla planifolia HOM05D003319 ORTHO05D003739 8.7e-25 118.6 398 30.2
Sed0025417 Sechium edule HOM05D003319 ORTHO05D003739 1.1e-24 118.2 312 32.7
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 1.1e-24 118.2 253 37.2
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 1.1e-24 118.2 296 32.1
BcaC09g49499 Brassica carinata HOM05D003319 ORTHO05D003739 1.9e-24 117.5 380 31.8
C01p35850 Brassica napus HOM05D003319 ORTHO05D003739 1.9e-24 117.5 380 31.8
BolC1t03546H Brassica oleracea HOM05D003319 ORTHO05D003739 1.9e-24 117.5 380 31.8
ClCG11G014590 Citrullus lanatus HOM05D003319 ORTHO05D003739 5.6e-24 115.9 362 31.5
Lj4A717T32 Lonicera japonica HOM05D003319 ORTHO05D003739 7.3e-24 115.5 175 45.1
A01p28300 Brassica napus HOM05D003319 ORTHO05D003739 1.3e-23 114.8 380 31.6
BraA01t02959Z Brassica rapa HOM05D003319 ORTHO05D003739 1.3e-23 114.8 380 31.6
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 1.3e-23 114.8 290 33.1
CAN.G193.10 Capsicum annuum HOM05D003319 ORTHO05D003739 2.8e-23 113.6 258 34.1
Lsat_1_v5_gn_6_104940 Lactuca sativa HOM05D003319 ORTHO05D003739 2.8e-23 113.6 283 33.6
CsaV3_3G048000 Cucumis sativus L. HOM05D003319 ORTHO05D003739 4.8e-23 112.8 332 31.3
BcaB04g20193 Brassica carinata HOM05D003319 ORTHO05D003739 8.1e-23 112.1 383 31.1
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 1.1e-22 111.7 361 29.4
Ca_29526_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 1.4e-22 111.3 300 32.0
Mapoly0014s0193 Marchantia polymorpha HOM05D003319 ORTHO05D003739 2.4e-22 110.5 328 29.3
Medtr3g100180 Medicago truncatula HOM05D003319 ORTHO05D003739 3.1e-22 110.2 289 31.1
Phvul.008G182100 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 6.9e-22 109.0 237 34.6
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 2.0e-21 107.5 483 26.9
ClCG08G011640 Citrullus lanatus HOM05D003319 ORTHO05D003739 2.6e-21 107.1 417 29.5
EL10Ac3g06093 Beta vulgaris HOM05D003319 ORTHO05D003739 8.4e-20 102.1 386 29.5
AUR62002401 Chenopodium quinoa HOM05D003319 ORTHO05D003739 8.4e-20 102.1 411 31.9
AUR62023790 Chenopodium quinoa HOM05D003319 ORTHO05D003739 8.4e-20 102.1 363 33.3
unitig_32.g10947 Utricularia gibba HOM05D003319 ORTHO05D003739 9.3e-19 98.6 274 29.9
Psat2g065280 Pisum sativum HOM05D003319 ORTHO05D003739 3.9e-17 93.2 227 32.2
Ah.07g202760 Amaranthus hybridus HOM05D003319 ORTHO05D003739 1.1e-16 91.7 390 30.5
SHI20381 Sapria himalayana HOM05D003319 ORTHO05D003739 2.8e-15 87.0 123 43.1
Zm00001eb181960 Zea mays HOM05D003319 ORTHO05D003739 1.1e-14 85.1 219 30.6
AL2G18190 Arabidopsis lyrata HOM05D003319 ORTHO05D003739 3.1e-14 83.6 318 30.2
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 2.6e-13 80.5 362 30.4
Zm00001eb243450 Zea mays HOM05D003319 ORTHO05D003739 2.6e-13 80.5 222 32.9
FAN12G3643 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.5e-13 79.7 77 51.9
FAN12G3747 Fragaria x ananassa HOM05D003319 ORTHO05D003739 5.8e-13 79.3 77 51.9
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 1.7e-12 77.8 391 30.2
AUR62014349 Chenopodium quinoa HOM05D003319 ORTHO05D003739 2.9e-12 77.0 282 27.7
arahy.Tifrunner.gnm1.ann1.UL2XNL Arachis hypogaea HOM05D003319 ORTHO05D003739 1.1e-11 75.1 70 51.4
LjContig00408g0021434 Lotus japonicus HOM05D003319 ORTHO05D003739 1.1e-11 75.1 146 33.6
Os02g0551400 Oryza sativa ssp. japonica HOM05D003319 ORTHO05D003739 4.2e-11 73.2 335 27.5
arahy.Tifrunner.gnm1.ann1.TQJ3R9 Arachis hypogaea HOM05D003319 ORTHO05D003739 7.1e-11 72.4 78 46.2
Hma1.2p1_0616F.1_g189970 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 4.6e-10 69.7 118 41.5
FvH4_4g17970 Fragaria vesca HOM05D003319 ORTHO05D003739 1.9e-08 64.3 125 34.4
SHI20380 Sapria himalayana HOM05D003319 ORTHO05D003739 2.1e-07 60.8 107 35.5
Lj4A88T36 Lonicera japonica HOM05D003319 ORTHO05D003739 2.8e-07 60.5 141 34.8
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 3.7e-07 60.1 250 29.6
SEGI_24455 Sequoiadendron giganteum HOM05D003319 ORTHO05D003739 5.3e-06 56.2 203 26.6


User provided reference genes

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