Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3336 Papaver somniferum HOM05D003520 ORTHO05D003332 1.6e-77 292.7 150 100.0
PSO782G5503 Papaver somniferum HOM05D003520 ORTHO05D003332 1.7e-71 272.7 138 100.0
PSO478G3392 Papaver somniferum HOM05D003520 ORTHO05D003332 1.6e-69 266.2 138 97.1
Duzib205G1307 Durio zibethinus HOM05D003520 ORTHO05D003332 1.1e-14 84.0 148 35.8
DCAR_008413 Daucus carota HOM05D003520 ORTHO05D003332 1.1e-11 73.9 129 35.7
TAR375G0279 Trochodendron aralioides HOM05D003520 ORTHO05D003332 1.1e-11 73.9 138 35.5
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.3e-11 72.0 124 37.9
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.3e-11 72.0 124 37.9
COL.COLO4_34422 Corchorus olitorius HOM05D003520 ORTHO05D003332 5.7e-11 71.6 145 35.2
Nn6g33544 Nelumbo nucifera HOM05D003520 ORTHO05D003332 5.7e-11 71.6 157 33.8
VMungo0464G1159 Vigna mungo HOM05D003520 ORTHO05D003332 7.4e-11 71.2 151 33.8
CiPaw.11G138700 Carya illinoinensis HOM05D003520 ORTHO05D003332 9.7e-11 70.9 129 34.9
Cfa012135 Carpinus fangiana HOM05D003520 ORTHO05D003332 1.7e-10 70.1 127 34.6
Lj2C195G2 Lonicera japonica HOM05D003520 ORTHO05D003332 4.8e-10 68.6 152 30.9
Duzib084G0866 Durio zibethinus HOM05D003520 ORTHO05D003332 6.3e-10 68.2 151 32.5
MBI18_g01149_MAGBIO Magnolia biondii HOM05D003520 ORTHO05D003332 6.3e-10 68.2 126 35.7
Os04g0273900 Oryza sativa ssp. japonica HOM05D003520 ORTHO05D003332 1.8e-09 66.6 140 34.3
Thecc.03G274800 Theobroma cacao HOM05D003520 ORTHO05D003332 1.8e-09 66.6 124 33.9
Hund11497 Selenicereus undatus HOM05D003520 ORTHO05D003332 2.4e-09 66.2 145 33.1
MSTRG.8747 Avicennia marina HOM05D003520 ORTHO05D003332 3.1e-09 65.9 146 32.9
RcHm_v2.0_Chr7g0198661 Rosa chinensis HOM05D003520 ORTHO05D003332 3.1e-09 65.9 136 36.8
Migut.F00353 Erythranthe guttata HOM05D003520 ORTHO05D003332 4.1e-09 65.5 151 29.8
Actinidia05219 Actinidia chinensis HOM05D003520 ORTHO05D003332 5.3e-09 65.1 146 32.9
Dinv37667 Davidia involucrata HOM05D003520 ORTHO05D003332 5.3e-09 65.1 152 30.3
Hma1.2p1_0514F.1_g169820 Hydrangea macrophylla HOM05D003520 ORTHO05D003332 5.3e-09 65.1 145 31.7
Os04g0193200 Oryza sativa ssp. japonica HOM05D003520 ORTHO05D003332 5.3e-09 65.1 141 36.2
CiPaw.04G065200 Carya illinoinensis HOM05D003520 ORTHO05D003332 6.9e-09 64.7 122 35.2
RcHm_v2.0_Chr5g0062921 Rosa chinensis HOM05D006496 ORTHO05D008390 6.9e-09 64.7 117 35.9
Zm00001eb048990 Zea mays HOM05D003520 ORTHO05D003332 6.9e-09 64.7 118 33.1
Nn1g01417 Nelumbo nucifera HOM05D003520 ORTHO05D003332 9.1e-09 64.3 146 30.1
FAN04G1936 Fragaria x ananassa HOM05D003520 ORTHO05D003332 1.2e-08 63.9 136 36.8
Glyma.16G194400 Glycine max HOM05D003520 ORTHO05D003332 1.5e-08 63.5 95 40.0
Sed0002800 Sechium edule HOM05D003520 ORTHO05D003332 1.5e-08 63.5 124 31.5
TAR629G1002 Trochodendron aralioides HOM05D003520 ORTHO05D003332 1.5e-08 63.5 159 32.7
FAN18G3894 Fragaria x ananassa HOM05D003520 ORTHO05D003332 2.6e-08 62.8 136 33.8
TWI14G1277 Tripterygium wilfordii HOM05D003520 ORTHO05D003332 2.6e-08 62.8 125 38.4
FAN08G2904 Fragaria x ananassa HOM05D003520 ORTHO05D003332 3.4e-08 62.4 135 36.3
Ah.02g116500 Amaranthus hybridus HOM05D003520 ORTHO05D003332 4.5e-08 62.0 99 39.4
FAN13G1265 Fragaria x ananassa HOM05D003520 ORTHO05D003332 4.5e-08 62.0 136 35.3
GSVIVG01010547001 Vitis vinifera HOM05D003520 ORTHO05D003332 5.9e-08 61.6 146 32.2
Gohir.A11G021700 Gossypium hirsutum HOM05D003520 ORTHO05D003332 7.7e-08 61.2 148 29.7
Prupe.5G094800 Prunus persica HOM05D003520 ORTHO05D003332 7.7e-08 61.2 126 31.7
Zm00001eb420370 Zea mays HOM05D003520 ORTHO05D003332 1.0e-07 60.8 102 33.3
FvH4_5g01860 Fragaria vesca HOM05D003520 ORTHO05D003332 1.3e-07 60.5 136 36.0
THA.LOC104809412 Tarenaya hassleriana HOM05D012020 ORTHO05D013949 1.3e-07 60.5 139 32.4
TWI81G1024 Tripterygium wilfordii HOM05D003520 ORTHO05D003332 1.3e-07 60.5 154 34.4
ECA240G0038 Erigeron canadensis HOM05D003520 ORTHO05D003332 1.7e-07 60.1 138 34.8
MD06G1076800 Malus domestica HOM05D003520 ORTHO05D003332 1.7e-07 60.1 150 32.0
Os04g0266400 Oryza sativa ssp. japonica HOM05D003520 ORTHO05D003332 1.7e-07 60.1 139 33.1
QL12p017888 Quercus lobata HOM05D003520 ORTHO05D003332 1.7e-07 60.1 164 30.5
Atru.chr9.1567 Acer truncatum HOM05D003520 ORTHO05D000037 2.2e-07 59.7 119 33.6
CDE06G0068 Ceratophyllum demersum HOM05D003520 ORTHO05D003332 2.9e-07 59.3 103 35.9
Haze_08912 Corylus avellana HOM05D003520 ORTHO05D003332 3.8e-07 58.9 119 32.8
Gohir.D11G021400 Gossypium hirsutum HOM05D003520 ORTHO05D003332 3.8e-07 58.9 148 29.1
Gorai.007G022700 Gossypium raimondii HOM05D003520 ORTHO05D003332 3.8e-07 58.9 148 29.1
Lj2g0020727 Lotus japonicus HOM05D003520 ORTHO05D003332 3.8e-07 58.9 119 36.1
arahy.Tifrunner.gnm1.ann1.D6ZH50 Arachis hypogaea HOM05D003520 ORTHO05D003332 6.5e-07 58.2 143 32.2
ClCG01G002970 Citrullus lanatus HOM05D003520 ORTHO05D003332 6.5e-07 58.2 148 27.0
MD01G1199300 Malus domestica HOM05D003520 ORTHO05D003332 1.1e-06 57.4 151 30.5
Potri.012G138300 Populus trichocarpa HOM05D003520 ORTHO05D003332 1.1e-06 57.4 122 34.4
CsaV3_5G003080 Cucumis sativus L. HOM05D003520 ORTHO05D003332 1.4e-06 57.0 148 27.0
MD14G1098200 Malus domestica HOM05D003520 ORTHO05D003332 1.4e-06 57.0 159 28.9
Manes.02G024900 Manihot esculenta HOM05D003520 ORTHO05D003332 1.4e-06 57.0 126 30.2
CDE02G3421 Ceratophyllum demersum HOM05D003520 ORTHO05D003332 4.2e-06 55.5 101 36.6
TAR636G1398 Trochodendron aralioides HOM05D003520 ORTHO05D003332 4.2e-06 55.5 99 35.4
SEGI_35246 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 5.5e-06 55.1 108 35.2
Sp6g21470 Schrenkiella parvula HOM05D006496 ORTHO05D008390 7.2e-06 54.7 136 33.1
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 9.4e-06 54.3 125 35.2
Sed0005114 Sechium edule HOM05D003520 ORTHO05D003332 9.4e-06 54.3 123 30.1


User provided reference genes

Program Settings