Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3302 Papaver somniferum HOM05D003771 ORTHO05D004396 4.2e-113 411.4 210 100.0
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 8.0e-80 300.8 203 80.3
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 8.0e-80 300.8 203 80.3
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 5.2e-63 245.0 200 69.0
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 2.0e-62 243.0 202 69.8
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 2.0e-62 243.0 201 69.2
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.7e-61 240.0 203 65.5
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 3.5e-59 232.3 202 65.8
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 4.6e-59 231.9 211 64.9
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 4.6e-59 231.9 188 69.1
TPR.G14800 Trifolium pratense HOM05D003771 ORTHO05D004396 4.6e-59 231.9 204 63.7
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 6.0e-59 231.5 204 64.7
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 1.0e-58 230.7 190 67.9
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 1.0e-58 230.7 190 67.9
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 2.3e-58 229.6 200 66.5
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 2.3e-58 229.6 211 64.5
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 3.9e-58 228.8 202 65.3
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 5.1e-58 228.4 203 64.5
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 5.1e-58 228.4 203 67.0
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 1.1e-57 227.3 203 66.0
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 1.1e-57 227.3 200 66.5
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.5e-57 226.9 200 66.5
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 1.5e-57 226.9 213 61.0
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 2.5e-57 226.1 200 66.5
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 5.6e-57 224.9 203 64.0
FAN12G3555 Fragaria x ananassa HOM05D003771 ORTHO05D004396 7.3e-57 224.6 200 65.5
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 7.3e-57 224.6 202 62.4
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 7.3e-57 224.6 200 65.0
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 7.3e-57 224.6 191 66.0
RcHm_v2.0_Chr4g0384831 Rosa chinensis HOM05D003771 ORTHO05D004396 7.3e-57 224.6 190 68.9
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 2.1e-56 223.0 198 64.1
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 2.1e-56 223.0 195 66.2
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 2.1e-56 223.0 192 66.7
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 3.6e-56 222.2 187 66.3
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 3.6e-56 222.2 200 64.0
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 4.8e-56 221.9 193 65.8
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 4.8e-56 221.9 199 64.3
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 1.1e-55 220.7 190 66.3
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 3.1e-55 219.2 205 66.8
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 4.0e-55 218.8 199 63.8
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 6.9e-55 218.0 188 64.4
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 9.0e-55 217.6 203 63.5
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 1.2e-54 217.2 203 63.1
Aqoxy3G02691 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.5e-54 216.9 156 72.4
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 4.4e-54 215.3 190 64.7
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 7.6e-54 214.5 215 62.3
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 7.6e-54 214.5 215 62.3
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 7.6e-54 214.5 203 63.5
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 1.3e-53 213.8 209 61.2
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 2.2e-53 213.0 209 61.7
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 2.9e-53 212.6 155 73.5
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 4.9e-53 211.8 201 64.2
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 6.4e-53 211.5 212 59.0
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 6.4e-53 211.5 203 62.1
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 1.9e-52 209.9 203 61.6
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 2.4e-52 209.5 201 63.7
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 5.4e-52 208.4 215 60.9
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 1.6e-51 206.8 217 60.4
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 2.1e-51 206.5 203 61.1
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 2.7e-51 206.1 215 60.0
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 2.7e-51 206.1 196 63.3
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 3.5e-51 205.7 191 63.9
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 3.5e-51 205.7 172 65.1
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 1.0e-50 204.1 215 59.5
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 1.3e-50 203.8 193 61.1
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 1.7e-50 203.4 215 59.1
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 2.3e-50 203.0 206 58.3
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 2.3e-50 203.0 203 61.1
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 2.3e-50 203.0 202 61.4
Nitab4.5_0006114g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 3.0e-50 202.6 216 58.8
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 3.9e-50 202.2 205 60.0
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 3.9e-50 202.2 215 58.6
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 3.9e-50 202.2 205 60.0
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 5.1e-50 201.8 204 60.8
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 1.5e-49 200.3 201 60.2
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 1.9e-49 199.9 215 57.7
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 2.5e-49 199.5 198 61.6
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 2.5e-49 199.5 198 61.6
C09p41070 Brassica napus HOM05D003771 ORTHO05D004396 2.5e-49 199.5 198 61.6
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 3.3e-49 199.1 206 57.8
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 3.3e-49 199.1 201 56.2
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 1.3e-48 197.2 213 57.7
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 1.3e-48 197.2 207 57.0
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 1.3e-48 197.2 175 64.0
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 1.6e-48 196.8 217 59.0
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.1e-48 196.4 211 58.3
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 2.1e-48 196.4 211 58.3
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 3.6e-48 195.7 219 57.1
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 4.8e-48 195.3 196 59.2
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 4.8e-48 195.3 196 59.2
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 4.8e-48 195.3 196 59.2
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 8.1e-48 194.5 200 58.5
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 1.4e-47 193.7 217 56.2
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 1.4e-47 193.7 196 58.7
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 1.4e-47 193.7 196 58.7
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 5.3e-47 191.8 211 57.3
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 1.7e-45 186.8 240 52.5
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 2.2e-45 186.4 205 56.6
unitig_899.g15422 Utricularia gibba HOM05D003771 ORTHO05D004396 3.8e-45 185.7 219 56.2
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 1.4e-44 183.7 188 58.5
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 2.4e-44 183.0 215 52.6
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 1.3e-40 170.6 200 53.0
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 6.2e-40 168.3 187 53.5
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 1.1e-39 167.5 200 53.0
CDE07G0913 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 5.5e-36 155.2 134 64.2
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 6.7e-34 148.3 205 49.8
Haze_19082 Corylus avellana HOM05D003771 ORTHO05D004396 8.7e-34 147.9 127 66.9
Lsat_1_v5_gn_8_69981 Lactuca sativa HOM05D003771 ORTHO05D004396 3.7e-32 142.5 194 49.5
vmacro20749 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 2.6e-30 136.3 128 63.3
HanXRQChr05g0138111 Helianthus annuus HOM05D003771 ORTHO05D004396 1.5e-25 120.6 117 52.1
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 2.9e-21 106.3 183 42.1
TAR636G2791 Trochodendron aralioides HOM05D000880 ORTHO05D004760 2.7e-19 99.8 61 83.6
MD07G1055200 Malus domestica HOM05D003771 ORTHO05D004396 2.0e-17 93.6 98 59.2
vmacro20748 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 3.1e-15 86.3 95 54.7
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 9.1e-15 84.7 74 62.2
AagrBONN_evm.TU.Sc2ySwM_228.2999 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.4e-12 77.4 74 52.7
AagrBONN_evm.TU.Sc2ySwM_369.332 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.4e-12 77.4 74 52.7
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 5.5e-12 75.5 111 44.1
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.6e-11 73.9 118 39.0
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 1.0e-10 71.2 149 38.9
MD07G1055300 Malus domestica HOM05D003771 ORTHO05D004396 1.4e-10 70.9 67 58.2
Lsat_1_v5_gn_5_95420 Lactuca sativa HOM05D004927 ORTHO05D005798 9.1e-07 58.2 79 43.0


User provided reference genes

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