Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.7e-177 625.9 322 100.0
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 6.6e-166 587.4 351 88.6
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 2.1e-95 353.2 327 59.3
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 3.1e-91 339.3 315 58.1
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 3.8e-89 332.4 340 54.4
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.4e-85 319.3 353 52.1
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 9.1e-83 311.2 330 52.7
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.6e-82 310.5 330 52.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.6e-82 310.5 349 52.1
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 7.7e-82 308.1 334 52.1
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.2e-81 306.6 357 50.4
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 5.0e-81 305.4 342 52.0
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 6.5e-81 305.1 325 52.9
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 8.5e-81 304.7 350 49.1
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.1e-80 304.3 332 51.5
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 4.7e-79 298.9 317 52.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 6.1e-79 298.5 348 50.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 8.0e-79 298.1 319 52.7
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.0e-79 298.1 330 50.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.8e-78 297.0 341 49.0
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 3.0e-78 296.2 358 47.2
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.0e-78 296.2 349 48.7
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 4.0e-78 295.8 349 48.4
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 6.8e-78 295.0 345 48.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.6e-77 293.1 349 49.6
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 7.5e-77 291.6 331 52.0
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 7.5e-77 291.6 331 52.0
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.5e-77 291.6 304 54.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 7.5e-77 291.6 333 50.2
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 7.5e-77 291.6 331 51.1
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 9.8e-77 291.2 343 48.7
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 9.8e-77 291.2 315 54.0
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 9.8e-77 291.2 332 51.8
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.3e-76 290.8 334 48.2
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.3e-76 290.8 312 53.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.2e-76 290.0 354 46.6
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 3.7e-76 289.3 354 49.2
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 3.7e-76 289.3 335 49.6
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 4.9e-76 288.9 346 50.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.9e-76 288.9 316 50.0
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 4.9e-76 288.9 350 47.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.3e-76 288.5 334 49.4
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.3e-76 288.5 312 53.2
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.3e-76 288.5 309 53.1
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-75 287.7 334 48.8
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.4e-75 286.6 322 49.1
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 3.1e-75 286.2 334 47.6
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 5.4e-75 285.4 334 50.0
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.4e-75 285.4 341 49.3
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 5.4e-75 285.4 346 49.4
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 5.4e-75 285.4 328 49.7
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 7.0e-75 285.0 316 50.6
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 9.2e-75 284.6 332 50.9
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 9.2e-75 284.6 311 51.4
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 9.2e-75 284.6 325 51.1
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.2e-74 284.3 331 51.4
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.7e-74 283.1 328 48.5
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 7.7e-74 281.6 351 49.3
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 7.7e-74 281.6 344 47.7
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 7.7e-74 281.6 328 49.7
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.3e-73 280.8 331 48.6
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.7e-73 280.4 350 47.4
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 2.9e-73 279.6 370 45.4
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 3.8e-73 279.3 329 49.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 5.0e-73 278.9 321 49.2
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 5.0e-73 278.9 327 51.7
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.5e-72 276.6 340 47.6
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 3.3e-72 276.2 324 47.8
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 5.6e-72 275.4 292 51.7
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.6e-71 273.9 289 51.2
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.1e-71 273.5 305 50.5
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.8e-71 273.1 245 60.0
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 8.0e-71 271.6 338 48.5
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.0e-70 271.2 335 47.5
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 2.6e-69 266.5 341 48.4
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.7e-68 263.8 334 47.0
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.2e-68 263.5 331 46.2
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 4.9e-68 262.3 347 43.2
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.4e-68 261.9 282 50.7
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 8.3e-68 261.5 343 44.9
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.0e-66 256.9 289 49.1
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 7.8e-66 255.0 305 48.5
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.7e-65 253.8 332 46.1
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.6e-65 251.9 245 56.7
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 8.6e-65 251.5 323 44.3
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.3e-64 249.6 326 45.4
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 7.3e-64 248.4 437 37.8
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.2e-60 236.9 370 41.1
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 3.7e-60 236.1 334 45.8
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 6.4e-60 235.3 249 53.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.6e-58 230.7 324 44.8
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 2.3e-57 226.9 281 47.7
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.9e-57 226.1 387 37.2
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 3.4e-45 186.4 176 54.0
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 6.2e-39 165.6 445 31.9
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.4e-35 154.5 135 59.3
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 5.4e-35 152.5 210 44.8
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 5.1e-33 146.0 353 30.9
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 4.3e-32 142.9 369 29.0
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 9.0e-30 135.2 97 68.0
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.2e-28 130.6 251 35.9
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 9.0e-22 108.6 158 48.1
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 2.0e-21 107.5 199 36.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 9.9e-21 105.1 77 64.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 6.4e-20 102.4 226 36.3
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 5.6e-16 89.4 232 31.9
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 8.1e-15 85.5 206 27.7
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.1e-14 85.1 206 27.2
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.5e-10 70.1 134 37.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.5e-10 70.1 50 66.0
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 4.6e-10 69.7 76 50.0
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 6.0e-10 69.3 59 62.7
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 2.3e-09 67.4 50 62.0
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-08 65.1 65 47.7
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.5e-08 64.7 60 58.3
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.5e-08 63.9 63 55.6
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.3e-07 61.6 87 42.5
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 6.3e-07 59.3 123 33.3
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 6.9e-06 55.8 43 60.5


User provided reference genes

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