Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3136 Papaver somniferum HOM05D000008 ORTHO05D000005 9.9e-89 330.1 167 100.0
PSO063G1441 Papaver somniferum HOM05D000008 ORTHO05D000005 1.2e-83 313.2 166 94.0
TAR636G2370 Trochodendron aralioides HOM05D000008 ORTHO05D000005 2.2e-27 126.3 171 48.0
TAR629G0288 Trochodendron aralioides HOM05D006948 ORTHO05D000005 9.1e-26 120.9 170 45.9
TAR374G0615 Trochodendron aralioides HOM05D001438 ORTHO05D001336 1.0e-21 107.5 164 42.7
Aqoxy1G03180 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 6.7e-21 104.8 171 45.6
MBI04_g34102_MAGBIO Magnolia biondii HOM05D000008 ORTHO05D000005 6.7e-21 104.8 153 44.4
Aqoxy3G02808 Aquilegia oxysepala HOM05D000008 ORTHO05D000005 3.7e-19 99.0 172 42.4
Dinv44081 Davidia involucrata HOM05D000008 ORTHO05D000005 7.0e-18 94.7 152 43.4
Nn1g00909 Nelumbo nucifera HOM05D000008 ORTHO05D000005 5.5e-15 85.1 157 42.7
GSVIVG01018234001 Vitis vinifera HOM05D000008 ORTHO05D000005 1.2e-14 84.0 154 40.3
CSS0011063 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 2.7e-14 82.8 170 38.2
Duzib205G1423 Durio zibethinus HOM05D000008 ORTHO05D000005 2.3e-13 79.7 152 36.2
Lj9A560T44 Lonicera japonica HOM05D000008 ORTHO05D000005 4.0e-13 79.0 178 38.8
Dinv21664 Davidia involucrata HOM05D000008 ORTHO05D000005 8.8e-13 77.8 169 35.5
Dinv43645 Davidia involucrata HOM05D000008 ORTHO05D000005 1.5e-12 77.0 172 37.8
Hma1.2p1_1740F.1_g300060 Hydrangea macrophylla HOM05D000008 ORTHO05D000005 1.5e-12 77.0 150 36.0
TWI59G1069 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 4.4e-12 75.5 183 33.3
TWI23G1012 Tripterygium wilfordii HOM05D000008 ORTHO05D000005 7.5e-12 74.7 176 34.7
Prupe.2G273900 Prunus persica HOM05D000008 ORTHO05D000005 1.3e-11 73.9 153 39.9
Oeu000049.2 Olea europaea HOM05D000008 ORTHO05D000005 2.2e-11 73.2 175 32.6
Thecc.01G389400 Theobroma cacao HOM05D000008 ORTHO05D000005 2.2e-11 73.2 175 34.9
Gohir.D03G106200 Gossypium hirsutum HOM05D000008 ORTHO05D000005 2.8e-11 72.8 142 33.8
Gorai.003G112700 Gossypium raimondii HOM05D000008 ORTHO05D000005 2.8e-11 72.8 142 33.8
CiPaw.13G028800 Carya illinoinensis HOM05D000008 ORTHO05D000005 4.8e-11 72.0 172 33.7
Glyma.07G110700 Glycine max HOM05D000008 ORTHO05D000005 1.1e-10 70.9 173 33.5
Duzib138G1553 Durio zibethinus HOM05D000008 ORTHO05D000005 1.4e-10 70.5 173 32.4
Glyma.03G115400 Glycine max HOM05D000008 ORTHO05D000005 2.4e-10 69.7 175 32.0
Thecc.03G150400 Theobroma cacao HOM05D000008 ORTHO05D000005 3.1e-10 69.3 152 34.9
Rhsim07G0115100 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.3e-10 68.6 158 34.8
Oeu020086.1 Olea europaea HOM05D000008 ORTHO05D000005 7.0e-10 68.2 174 33.9
Nn6g33863 Nelumbo nucifera HOM05D000008 ORTHO05D000005 9.1e-10 67.8 145 37.2
MD01G1178100 Malus domestica HOM05D000008 ORTHO05D000005 1.2e-09 67.4 151 35.1
Ciclev10021345m.g Citrus clementina HOM05D000008 ORTHO05D000005 1.6e-09 67.0 174 32.2
Prupe.2G124100 Prunus persica HOM05D000008 ORTHO05D000005 1.6e-09 67.0 172 37.8
CDE02G3479 Ceratophyllum demersum HOM05D000008 ORTHO05D000005 2.7e-09 66.2 109 36.7
COL.COLO4_12439 Corchorus olitorius HOM05D000008 ORTHO05D000005 7.7e-09 64.7 175 32.6
CSS0026160 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 1.3e-08 63.9 169 33.1
QL04p033420 Quercus lobata HOM05D000008 ORTHO05D000005 1.3e-08 63.9 172 31.4
Cpa.g.sc37.96 Carica papaya HOM05D000008 ORTHO05D000005 3.8e-08 62.4 138 36.2
vmacro21046 Vaccinium macrocarpon HOM05D000008 ORTHO05D000005 3.8e-08 62.4 144 35.4
Lj3g0008153 Lotus japonicus HOM05D000008 ORTHO05D000005 5.0e-08 62.0 172 30.8
Rhsim01G0137300 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.0e-08 62.0 142 35.9
VMungo0331G1228 Vigna mungo HOM05D000008 ORTHO05D000005 6.5e-08 61.6 147 31.3
Lj9C559T13 Lonicera japonica HOM05D000008 ORTHO05D000005 8.5e-08 61.2 147 33.3
Phvul.010G053200 Phaseolus vulgaris HOM05D000008 ORTHO05D000005 7.2e-07 58.2 146 32.2
Potri.002G140900 Populus trichocarpa HOM05D000008 ORTHO05D000005 9.4e-07 57.8 165 31.5
Cfa011102 Carpinus fangiana HOM05D000008 ORTHO05D000005 1.2e-06 57.4 164 31.7
Gorai.004G165400 Gossypium raimondii HOM05D000008 ORTHO05D000005 1.2e-06 57.4 178 31.5
MD07G1101000 Malus domestica HOM05D000008 ORTHO05D000005 1.2e-06 57.4 147 34.0
Potri.014G054700 Populus trichocarpa HOM05D000008 ORTHO05D000005 1.2e-06 57.4 175 29.7
COL.COLO4_14064 Corchorus olitorius HOM05D000008 ORTHO05D000005 1.6e-06 57.0 143 32.9
Psat4g226000 Pisum sativum HOM05D000008 ORTHO05D000005 2.7e-06 56.2 141 33.3
Gohir.A08G138000 Gossypium hirsutum HOM05D000008 ORTHO05D000005 3.6e-06 55.8 178 30.9
Cc02_g24840 Coffea canephora HOM05D000008 ORTHO05D000005 8.0e-06 54.7 172 30.8
Medtr4g029540 Medicago truncatula HOM05D000008 ORTHO05D000005 8.0e-06 54.7 142 32.4
Nitab4.5_0006450g0010 Nicotiana tabacum HOM05D000008 ORTHO05D000005 8.0e-06 54.7 165 32.1
TPR.G24948 Trifolium pratense HOM05D000008 ORTHO05D000005 8.0e-06 54.7 147 34.0


User provided reference genes

Program Settings