Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 8.0e-266 919.8 461 100.0
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 2.4e-262 908.3 461 98.9
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 2.2e-191 672.5 457 71.6
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 2.7e-189 665.6 464 72.0
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 6.7e-188 661.0 468 70.1
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 2.2e-186 656.0 463 69.5
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 6.3e-186 654.4 463 71.1
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.1e-185 653.7 462 70.6
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.8e-185 652.9 462 71.0
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 4.1e-185 651.7 461 70.1
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 5.3e-185 651.4 461 69.8
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 1.6e-184 649.8 480 69.6
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.6e-184 649.0 466 69.5
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 7.7e-184 647.5 462 71.0
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 3.8e-183 645.2 461 69.2
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 5.0e-183 644.8 466 69.5
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.1e-182 643.7 465 69.2
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 1.9e-182 642.9 462 68.6
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 2.5e-182 642.5 464 70.9
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 4.2e-182 641.7 480 68.1
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 4.2e-182 641.7 466 68.0
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 5.5e-182 641.3 512 64.1
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 9.4e-182 640.6 458 70.1
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.6e-181 639.8 460 68.0
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 4.7e-181 638.3 463 70.0
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.8e-180 636.3 463 69.1
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 1.8e-180 636.3 463 67.2
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 2.3e-180 636.0 458 67.9
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 3.0e-180 635.6 464 68.3
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.5e-179 633.3 466 69.5
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.5e-179 633.3 458 67.9
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 2.6e-179 632.5 451 70.3
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 2.6e-179 632.5 477 68.1
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 2.6e-179 632.5 466 69.3
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 7.5e-179 630.9 466 69.1
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 1.3e-178 630.2 464 69.4
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.2e-178 629.4 458 67.5
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 2.8e-178 629.0 458 67.9
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 2.8e-178 629.0 466 67.2
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.4e-177 626.7 463 67.6
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 2.4e-177 625.9 458 66.4
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.4e-177 625.9 476 66.6
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 4.1e-177 625.2 459 69.5
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 4.1e-177 625.2 466 67.0
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 5.3e-177 624.8 463 68.7
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.2e-176 623.6 463 68.0
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 1.2e-176 623.6 464 67.9
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.6e-176 623.2 465 68.4
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.7e-176 622.5 463 67.6
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 2.7e-176 622.5 429 72.5
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 5.9e-176 621.3 464 67.7
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 7.7e-176 620.9 464 67.5
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 7.7e-176 620.9 466 66.3
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 1.1e-174 617.1 464 67.2
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 1.5e-174 616.7 467 65.3
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 2.5e-174 615.9 463 67.2
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.5e-174 615.9 467 64.9
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.5e-174 615.9 466 67.2
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 3.2e-174 615.5 465 67.7
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 2.7e-173 612.5 458 68.1
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 1.4e-172 610.1 459 67.8
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 1.4e-172 610.1 459 67.8
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 1.4e-172 610.1 464 66.4
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 1.8e-172 609.8 462 65.6
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 2.3e-172 609.4 461 67.0
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 3.0e-172 609.0 460 68.9
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 4.0e-172 608.6 463 66.1
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 6.8e-172 607.8 458 65.5
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 8.8e-172 607.4 476 66.0
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 2.0e-171 606.3 455 67.3
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.0e-171 606.3 461 65.9
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 7.5e-171 604.4 464 65.5
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 9.8e-171 604.0 467 65.5
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.3e-170 603.6 461 65.5
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 1.4e-169 600.1 505 61.2
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 3.1e-169 599.0 463 65.4
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 5.4e-169 598.2 462 65.2
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 9.1e-169 597.4 456 66.7
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 1.9e-166 589.7 463 63.3
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 5.5e-166 588.2 457 66.1
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 2.1e-165 586.3 459 63.6
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 3.6e-165 585.5 461 64.9
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 5.7e-163 578.2 461 64.0
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 7.5e-163 577.8 463 62.4
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 3.7e-162 575.5 440 66.8
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 4.9e-162 575.1 457 63.9
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-154 550.4 461 61.6
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 1.3e-154 550.4 406 66.7
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.1e-153 547.4 400 66.5
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.0e-151 540.8 429 65.3
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 1.7e-151 540.0 414 66.2
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.0e-151 538.5 483 59.2
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.0e-144 516.5 462 60.0
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 2.7e-144 516.2 465 58.7
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.5e-139 500.4 477 57.9
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 3.5e-136 489.2 454 54.0
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 2.3e-135 486.5 464 55.2
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 2.6e-131 473.0 311 78.8
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 2.2e-122 443.4 339 66.4
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 2.9e-114 416.4 417 54.7
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 1.8e-111 407.1 298 69.8
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 3.6e-109 399.4 281 69.0
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 1.3e-98 364.4 306 59.5
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.5e-97 360.1 333 59.5
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 4.6e-96 355.9 456 41.9
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.1e-92 343.2 346 55.8
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 1.3e-90 337.8 415 45.5
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 3.2e-89 333.2 459 43.1
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.2e-88 331.3 459 46.4
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 2.5e-86 323.6 472 39.4
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 6.9e-84 315.5 383 47.8
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 7.2e-81 305.4 459 38.6
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.9e-74 283.5 297 53.2
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 1.4e-73 281.2 230 56.5
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 2.3e-71 273.9 245 62.0
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 4.5e-67 259.6 231 57.6
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 1.2e-62 245.0 259 49.8
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.0e-55 220.3 165 63.6
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 4.5e-51 206.5 169 61.5
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 4.5e-43 179.9 158 64.6
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.6e-40 170.2 122 67.2
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 3.6e-40 170.2 131 64.1
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 3.2e-36 157.1 132 59.8
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 1.7e-34 151.4 123 61.8
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 6.8e-31 139.4 127 53.5
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 8.6e-26 122.5 102 61.8
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 1.0e-18 99.0 84 56.0
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-18 98.6 320 27.5
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 3.0e-18 97.4 107 50.5
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-14 85.5 52 80.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 4.1e-12 77.0 63 60.3
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 1.1e-07 62.4 54 64.8


User provided reference genes

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