Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 2.7e-25 117.9 58 100.0
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.1e-15 85.9 56 73.2
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 1.5e-15 85.5 48 81.2
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 2.5e-15 84.7 48 83.3
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 2.5e-15 84.7 48 83.3
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 4.3e-15 84.0 56 71.4
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 5.6e-15 83.6 50 76.0
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 5.6e-15 83.6 48 77.1
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 7.3e-15 83.2 57 70.2
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 7.3e-15 83.2 50 78.0
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 9.5e-15 82.8 51 74.5
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 1.2e-14 82.4 59 66.1
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 1.2e-14 82.4 50 76.0
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 1.2e-14 82.4 54 66.7
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 2.1e-14 81.6 56 71.4
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 2.8e-14 81.3 48 77.1
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 2.8e-14 81.3 50 72.0
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 3.6e-14 80.9 55 69.1
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 3.6e-14 80.9 55 63.6
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 4.7e-14 80.5 56 64.3
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 4.7e-14 80.5 50 72.0
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 6.2e-14 80.1 58 65.5
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 6.2e-14 80.1 50 70.0
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 8.1e-14 79.7 48 72.9
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 1.1e-13 79.3 58 67.2
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 1.4e-13 79.0 55 63.6
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 1.4e-13 79.0 48 75.0
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 1.8e-13 78.6 56 62.5
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 1.8e-13 78.6 56 62.5
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 1.8e-13 78.6 56 62.5
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 1.8e-13 78.6 55 63.6
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.8e-13 78.6 50 72.0
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 2.3e-13 78.2 55 63.6
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.3e-13 78.2 56 62.5
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 3.1e-13 77.8 56 64.3
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 3.1e-13 77.8 48 72.9
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 4.0e-13 77.4 56 60.7
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 5.2e-13 77.0 55 61.8
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 5.2e-13 77.0 53 71.7
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 6.8e-13 76.6 59 61.0
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 6.8e-13 76.6 58 65.5
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 6.8e-13 76.6 56 64.3
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 6.8e-13 76.6 56 64.3
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 8.9e-13 76.3 49 67.3
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 8.9e-13 76.3 55 61.8
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 1.2e-12 75.9 55 61.8
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 1.2e-12 75.9 58 62.1
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 1.5e-12 75.5 59 61.0
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 2.6e-12 74.7 56 64.3
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 2.6e-12 74.7 50 66.0
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 2.6e-12 74.7 56 58.9
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 4.4e-12 73.9 49 65.3
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 5.8e-12 73.6 48 64.6
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 5.8e-12 73.6 48 70.8
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 5.8e-12 73.6 55 60.0
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 7.5e-12 73.2 56 60.7
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 9.8e-12 72.8 55 60.0
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 9.8e-12 72.8 55 60.0
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 9.8e-12 72.8 54 63.0
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 1.3e-11 72.4 56 62.5
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.7e-11 72.0 52 65.4
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.7e-11 72.0 52 65.4
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.7e-11 72.0 56 58.9
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 1.7e-11 72.0 56 58.9
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 1.7e-11 72.0 46 71.7
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.2e-11 71.6 56 62.5
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 2.2e-11 71.6 49 65.3
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 2.9e-11 71.2 55 58.2
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 2.9e-11 71.2 55 58.2
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 2.9e-11 71.2 55 58.2
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 2.9e-11 71.2 55 58.2
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 2.9e-11 71.2 56 57.1
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 4.9e-11 70.5 55 60.0
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 8.3e-11 69.7 50 66.0
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 1.1e-10 69.3 49 57.1
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.9e-10 68.6 56 57.1
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 4.1e-10 67.4 56 55.4
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 5.4e-10 67.0 41 70.7
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.6e-09 65.5 56 53.6
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 1.6e-09 65.5 77 46.8
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 6.0e-09 63.5 52 63.5
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 2.3e-08 61.6 60 56.7
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 3.9e-08 60.8 36 75.0
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 7.3e-07 56.6 37 67.6
TWI81G0786 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 1.6e-06 55.5 35 68.6
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 4.7e-06 53.9 88 36.4


User provided reference genes

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