Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2986 Papaver somniferum HOM05D002019 ORTHO05D002150 5.7e-62 241.1 114 100.0
HanXRQChr15g0485231 Helianthus annuus HOM05D002019 ORTHO05D002150 1.5e-09 67.0 60 55.0
GSVIVG01035279001 Vitis vinifera HOM05D002019 ORTHO05D002150 1.9e-09 66.6 45 73.3
HanXRQChr16g0532381 Helianthus annuus HOM05D002019 ORTHO05D002150 5.6e-09 65.1 71 52.1
MSTRG.15624 Avicennia marina HOM05D002019 ORTHO05D002150 1.6e-08 63.5 47 63.8
Dinv19090 Davidia involucrata HOM05D002019 ORTHO05D002150 1.6e-08 63.5 46 67.4
ECA246G2032 Erigeron canadensis HOM05D002019 ORTHO05D002150 1.6e-08 63.5 68 54.4
Actinidia17154 Actinidia chinensis HOM05D002019 ORTHO05D002150 2.1e-08 63.2 68 54.4
CSS0034970 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 2.1e-08 63.2 46 69.6
Lsat_1_v5_gn_3_69461 Lactuca sativa HOM05D002019 ORTHO05D002150 2.8e-08 62.8 57 56.1
Nn4g24832 Nelumbo nucifera HOM05D002019 ORTHO05D002150 2.8e-08 62.8 42 69.0
Rhsim10G0186200 Rhododendron simsii HOM05D002019 ORTHO05D002150 2.8e-08 62.8 46 67.4
Glyma.18G045200 Glycine max HOM05D002019 ORTHO05D002150 3.6e-08 62.4 53 64.2
TPR.G37435 Trifolium pratense HOM05D002019 ORTHO05D002150 3.6e-08 62.4 45 71.1
Peaxi162Scf00521g00028 Petunia axillaris HOM05D002019 ORTHO05D002150 4.7e-08 62.0 62 59.7
LjContig00141g0027651 Lotus japonicus HOM05D002019 ORTHO05D002150 8.0e-08 61.2 66 51.5
Medtr3g064350 Medicago truncatula HOM05D002019 ORTHO05D002150 8.0e-08 61.2 45 68.9
Nitab4.5_0000091g0300 Nicotiana tabacum HOM05D002019 ORTHO05D002150 8.0e-08 61.2 46 67.4
Phvul.006G085800 Phaseolus vulgaris HOM05D002019 ORTHO05D002150 1.4e-07 60.5 38 73.7
Sopen03g005760 Solanum pennellii HOM05D002019 ORTHO05D002150 1.4e-07 60.5 46 65.2
PGSC0003DMG402024074 Solanum tuberosum HOM05D002019 ORTHO05D002150 1.4e-07 60.5 46 65.2
arahy.Tifrunner.gnm1.ann1.SQC659 Arachis hypogaea HOM05D002019 ORTHO05D002150 1.8e-07 60.1 45 66.7
arahy.Tifrunner.gnm1.ann1.ZUC4D4 Arachis hypogaea HOM05D002019 ORTHO05D002150 1.8e-07 60.1 45 66.7
Cc07_g12670 Coffea canephora HOM05D002019 ORTHO05D002150 1.8e-07 60.1 46 65.2
Glyma.11G208700 Glycine max HOM05D002019 ORTHO05D002150 1.8e-07 60.1 53 62.3
MBI03_g24044_MAGBIO Magnolia biondii HOM05D002019 ORTHO05D002150 1.8e-07 60.1 46 63.0
TAR629G3490 Trochodendron aralioides HOM05D002019 ORTHO05D002150 1.8e-07 60.1 46 65.2
DCAR_014138 Daucus carota HOM05D002019 ORTHO05D002150 2.3e-07 59.7 46 60.9
TAR622G0329 Trochodendron aralioides HOM05D002019 ORTHO05D002150 2.3e-07 59.7 45 66.7
VMungo0540G2448 Vigna mungo HOM05D002019 ORTHO05D002150 2.3e-07 59.7 45 66.7
Actinidia40403 Actinidia chinensis HOM05D002019 ORTHO05D002150 3.0e-07 59.3 38 71.1
Ca_17062_v3 Cicer arietinum L. HOM05D002019 ORTHO05D002150 3.0e-07 59.3 45 66.7
Phvul.008G241900 Phaseolus vulgaris HOM05D002019 ORTHO05D002150 3.0e-07 59.3 45 64.4
Psat5g145360 Pisum sativum HOM05D002019 ORTHO05D002150 3.0e-07 59.3 78 51.3
arahy.Tifrunner.gnm1.ann1.TVU1YR Arachis hypogaea HOM05D002019 ORTHO05D002150 4.0e-07 58.9 64 51.6
Hma1.2p1_0034F.1_g021470 Hydrangea macrophylla HOM05D002019 ORTHO05D002150 4.0e-07 58.9 46 65.2
Oeu012515.1 Olea europaea HOM05D002019 ORTHO05D002150 4.0e-07 58.9 46 63.0
Aqoxy3G04192 Aquilegia oxysepala HOM05D002019 ORTHO05D002150 5.2e-07 58.5 48 64.6
Hund26288 Selenicereus undatus HOM05D002019 ORTHO05D002150 8.9e-07 57.8 46 65.2
TAR383G0675 Trochodendron aralioides HOM05D002019 ORTHO05D002150 8.9e-07 57.8 40 70.0
TAR374G1288 Trochodendron aralioides HOM05D002019 ORTHO05D002150 1.2e-06 57.4 38 68.4
Atru.chr1.1979 Acer truncatum HOM05D002019 ORTHO05D002150 1.5e-06 57.0 38 71.1
arahy.Tifrunner.gnm1.ann1.EZ0DFJ Arachis hypogaea HOM05D002019 ORTHO05D002150 1.5e-06 57.0 64 50.0
CiPaw.03G078600 Carya illinoinensis HOM05D002019 ORTHO05D002150 1.5e-06 57.0 74 48.6
Glyma.02G239800 Glycine max HOM05D002019 ORTHO05D002150 1.5e-06 57.0 45 62.2
Glyma.14G209000 Glycine max HOM05D002019 ORTHO05D002150 1.5e-06 57.0 45 62.2
Nn6g35346 Nelumbo nucifera HOM05D002019 ORTHO05D002150 1.5e-06 57.0 40 72.5
ATR0705G013 Amborella trichopoda HOM05D002019 ORTHO05D002150 2.6e-06 56.2 37 70.3
THA.LOC104820871 Tarenaya hassleriana HOM05D009715 ORTHO05D011857 3.4e-06 55.8 44 56.8
Os01g0739500 Oryza sativa ssp. japonica HOM05D002019 ORTHO05D010005 4.4e-06 55.5 42 59.5
PSO063G3878 Papaver somniferum HOM05D002019 ORTHO05D002150 4.4e-06 55.5 44 61.4
PSO832G3635 Papaver somniferum HOM05D002019 ORTHO05D002150 4.4e-06 55.5 44 61.4
TWI74G0642 Tripterygium wilfordii HOM05D002019 ORTHO05D002150 5.8e-06 55.1 61 52.5
ClCG07G013370 Citrullus lanatus HOM05D002019 ORTHO05D002150 7.5e-06 54.7 35 68.6
SalBow5G0949 Salvia bowleyana HOM05D002019 ORTHO05D002150 7.5e-06 54.7 39 66.7
EL10Ac8g18366 Beta vulgaris HOM05D002019 ORTHO05D002150 9.8e-06 54.3 46 60.9
Ciclev10029664m.g Citrus clementina HOM05D008028 ORTHO05D010005 9.8e-06 54.3 45 55.6
HanXRQChr10g0313211 Helianthus annuus HOM05D002019 ORTHO05D002150 9.8e-06 54.3 41 65.9
Lj6g0022787 Lotus japonicus HOM05D002019 ORTHO05D002150 9.8e-06 54.3 46 60.9
Solyc03g031890.3 Solanum lycopersicum HOM05D002019 ORTHO05D002150 9.8e-06 54.3 117 35.0


User provided reference genes

Program Settings