Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 8.1e-67 257.3 166 100.0
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 2.9e-56 222.2 167 91.0
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 3.8e-56 221.9 168 88.7
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 2.6e-17 92.8 90 63.3
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 3.4e-17 92.4 107 57.0
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 7.7e-17 91.3 79 70.9
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 7.7e-17 91.3 90 65.6
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 1.7e-16 90.1 111 55.9
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 3.8e-16 89.0 173 45.1
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 8.5e-16 87.8 169 43.2
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 8.5e-16 87.8 87 63.2
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 8.5e-16 87.8 95 57.9
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.4e-15 87.0 81 66.7
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 5.5e-15 85.1 86 62.8
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 7.2e-15 84.7 78 69.2
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 9.4e-15 84.3 167 45.5
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.2e-14 84.0 95 54.7
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 1.6e-14 83.6 92 56.5
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.6e-14 83.6 169 42.0
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 1.6e-14 83.6 87 60.9
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.6e-14 83.6 89 56.2
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.1e-14 83.2 96 57.3
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 7.9e-14 81.3 100 55.0
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 7.9e-14 81.3 100 55.0
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 1.8e-13 80.1 90 52.2
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 3.0e-13 79.3 92 55.4
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 3.9e-13 79.0 160 41.2
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 1.1e-12 77.4 92 53.3
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 1.1e-12 77.4 92 53.3
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.5e-12 77.0 162 40.7
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 2.5e-12 76.3 84 57.1
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 2.5e-12 76.3 79 59.5
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 3.3e-12 75.9 97 49.5
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 4.3e-12 75.5 97 50.5
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 4.3e-12 75.5 97 49.5
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 5.7e-12 75.1 93 53.8
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 5.7e-12 75.1 90 56.7
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 7.4e-12 74.7 92 52.2
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 2.2e-11 73.2 87 52.9
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 3.7e-11 72.4 82 52.4
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 6.3e-11 71.6 160 38.8
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 1.1e-10 70.9 79 55.7
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 1.4e-10 70.5 74 59.5
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 1.4e-10 70.5 89 53.9
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 1.8e-10 70.1 80 56.2
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 3.1e-10 69.3 86 53.5
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 6.9e-10 68.2 90 55.6
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 6.9e-10 68.2 86 53.5
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.2e-09 67.4 116 44.0
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 1.5e-09 67.0 87 52.9
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 1.5e-09 67.0 96 47.9
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 2.6e-09 66.2 156 37.8
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 2.6e-09 66.2 86 52.3
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 4.5e-09 65.5 89 51.7
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 1.0e-08 64.3 90 54.4
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.3e-08 63.9 90 50.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 1.7e-08 63.5 90 52.2
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 1.7e-08 63.5 90 52.2
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 1.7e-08 63.5 88 51.1
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 1.7e-08 63.5 79 50.6
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 2.9e-08 62.8 86 50.0
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 3.8e-08 62.4 86 48.8
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 3.8e-08 62.4 71 54.9
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 5.0e-08 62.0 89 48.3
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 6.5e-08 61.6 89 50.6
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 6.5e-08 61.6 52 71.2
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 8.5e-08 61.2 109 43.1
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 1.4e-07 60.5 79 54.4
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 1.9e-07 60.1 82 51.2
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 1.9e-07 60.1 61 62.3
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 2.5e-07 59.7 80 48.8
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 5.5e-07 58.5 88 50.0
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 5.5e-07 58.5 73 50.7
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 5.5e-07 58.5 73 50.7
Nn1g00546 Nelumbo nucifera HOM05D007324 ORTHO05D007884 7.2e-07 58.2 85 48.2
Nn1g00547 Nelumbo nucifera HOM05D007324 ORTHO05D007884 7.2e-07 58.2 84 50.0
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 1.6e-06 57.0 78 47.4
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 2.1e-06 56.6 94 45.7
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 2.1e-06 56.6 89 48.3
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 3.6e-06 55.8 79 50.6
COL.COLO4_17062 Corchorus olitorius HOM05D007324 ORTHO05D007884 6.1e-06 55.1 88 46.6


User provided reference genes

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