Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.5e-212 741.9 389 100.0
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.9e-208 727.6 389 98.5
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.7e-131 473.4 396 61.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 9.5e-127 457.6 393 61.1
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 1.2e-126 457.2 394 59.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.8e-125 453.4 388 59.8
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.2e-121 440.7 356 61.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.0e-120 437.6 400 57.0
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 6.6e-120 434.9 367 60.2
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.1e-119 434.1 377 58.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.5e-119 433.7 359 60.4
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.9e-119 433.3 401 56.1
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.3e-119 432.6 384 58.9
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 3.3e-119 432.6 365 60.3
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 3.3e-119 432.6 378 59.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 4.3e-119 432.2 357 60.5
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 4.3e-119 432.2 366 59.6
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 5.6e-119 431.8 359 60.4
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 5.6e-119 431.8 391 57.0
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 7.3e-119 431.4 371 60.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-118 430.6 392 57.4
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-118 430.6 390 57.4
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 2.1e-118 429.9 389 56.3
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.4e-117 426.4 391 56.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.4e-117 426.4 367 60.8
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.1e-117 426.0 392 55.6
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 6.8e-117 424.9 393 56.2
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.5e-116 423.7 389 56.8
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.5e-116 423.7 355 59.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.0e-116 423.3 390 55.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.4e-116 422.5 390 55.4
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 5.8e-116 421.8 359 58.5
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.8e-115 419.1 392 54.6
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 4.9e-115 418.7 388 55.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 4.9e-115 418.7 370 58.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 6.4e-115 418.3 361 58.4
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 8.4e-115 417.9 358 60.3
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.9e-114 416.8 382 55.5
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 4.2e-114 415.6 359 59.1
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 9.3e-114 414.5 334 62.0
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.2e-113 414.1 360 58.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 3.5e-113 412.5 345 59.7
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.7e-112 410.2 335 59.4
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.5e-111 407.1 388 54.9
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.6e-110 402.5 342 61.7
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 4.8e-110 402.1 349 57.9
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.8e-110 402.1 360 58.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.1e-109 399.4 398 53.0
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 6.9e-109 398.3 402 50.7
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 9.0e-109 397.9 374 53.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.0e-109 397.9 328 63.4
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 5.8e-108 395.2 337 59.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 7.6e-108 394.8 286 68.5
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.2e-107 393.3 357 57.4
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.2e-107 393.3 337 58.8
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 2.9e-107 392.9 398 53.3
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.9e-107 392.9 337 58.8
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 3.8e-107 392.5 366 56.6
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.8e-107 392.5 343 59.5
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.4e-106 390.6 370 55.7
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.2e-106 389.0 374 52.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 5.4e-106 388.7 374 52.9
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 5.4e-106 388.7 361 54.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 7.1e-106 388.3 363 56.2
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 3.5e-105 386.0 322 59.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 7.8e-105 384.8 339 59.0
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 6.6e-104 381.7 339 59.0
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.3e-103 379.4 364 55.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.1e-101 374.4 395 52.2
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.8e-100 368.6 324 56.5
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 8.4e-99 364.8 291 62.2
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.1e-98 364.4 329 55.9
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-98 364.4 329 56.2
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.4e-98 364.0 329 55.9
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.9e-98 363.6 329 55.9
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.4e-98 363.2 366 51.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 3.2e-98 362.8 329 56.2
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.2e-98 362.5 329 55.6
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 5.4e-98 362.1 329 55.9
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.7e-97 359.8 388 50.5
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 3.5e-97 359.4 329 55.9
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 7.9e-97 358.2 333 55.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.0e-96 357.8 329 55.0
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 1.8e-96 357.1 292 61.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.3e-95 352.8 392 49.7
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.8e-94 349.7 356 53.1
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.8e-93 347.1 358 53.6
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.4e-93 346.7 356 52.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 6.9e-93 345.1 369 50.7
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 5.8e-92 342.0 280 61.1
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 9.3e-90 334.7 276 60.9
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.6e-89 334.0 279 59.9
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 4.6e-89 332.4 332 52.7
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 7.9e-89 331.6 243 66.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.9e-85 318.5 272 55.9
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.5e-84 317.4 340 51.2
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.9e-83 313.2 244 61.9
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 8.4e-83 311.6 327 48.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 4.6e-81 305.8 248 60.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 7.9e-81 305.1 313 51.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.3e-77 292.4 233 62.2
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 7.2e-74 282.0 301 49.5
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.4e-74 281.6 179 71.5
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.4e-72 277.7 299 51.8
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.7e-70 270.8 171 71.9
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.7e-67 260.8 333 45.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 3.5e-52 209.9 255 45.5
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 4.7e-49 199.5 173 59.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.7e-46 191.0 162 57.4
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 3.8e-43 179.9 320 37.2
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 4.9e-38 162.9 274 39.1
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.0e-36 157.5 160 54.4
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.6e-35 152.1 140 54.3
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.8e-33 147.1 201 41.3
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 9.8e-23 112.1 71 74.6
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.1e-13 82.0 118 44.1
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.6e-10 69.7 55 58.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.9e-08 62.4 48 54.2


User provided reference genes

Program Settings