Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 4.4e-253 877.5 440 100.0
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 1.1e-248 862.8 438 97.5
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.3e-201 706.4 442 78.7
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 2.5e-200 702.2 441 76.6
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 8.1e-199 697.2 440 75.0
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 4.0e-198 694.9 441 73.9
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.0e-198 694.9 409 78.5
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 1.5e-197 693.0 404 78.0
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 3.4e-197 691.8 406 78.1
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.7e-196 689.5 395 81.3
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.9e-196 688.7 409 76.5
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 4.9e-196 688.0 443 74.3
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.1e-195 686.8 443 74.0
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.1e-195 686.8 407 77.4
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 1.9e-195 686.0 404 77.5
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.9e-195 686.0 405 77.8
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 2.4e-195 685.6 449 72.8
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 2.4e-195 685.6 408 77.9
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.4e-195 685.6 442 73.3
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 3.2e-195 685.3 409 76.8
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.2e-195 684.9 443 73.6
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 5.4e-195 684.5 443 72.9
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 5.4e-195 684.5 442 73.1
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 7.1e-195 684.1 410 75.6
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 7.1e-195 684.1 441 74.6
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 9.2e-195 683.7 407 77.1
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.2e-194 683.3 405 77.3
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 1.2e-194 683.3 407 77.9
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.2e-194 683.3 440 75.9
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.1e-194 682.6 406 76.4
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 2.7e-194 682.2 410 78.5
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 3.5e-194 681.8 442 73.5
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 4.6e-194 681.4 405 77.5
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 4.6e-194 681.4 442 72.9
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 6.0e-194 681.0 407 76.9
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 7.8e-194 680.6 409 80.4
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 1.0e-193 680.2 405 76.0
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.3e-193 679.9 415 75.9
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 1.3e-193 679.9 405 75.8
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.3e-193 679.1 438 74.4
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.9e-193 678.3 443 72.9
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 5.1e-193 677.9 404 77.2
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 6.6e-193 677.6 400 78.0
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 6.6e-193 677.6 442 72.2
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 1.1e-192 676.8 406 77.6
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 1.1e-192 676.8 442 73.5
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 1.5e-192 676.4 405 75.3
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 1.5e-192 676.4 405 76.3
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 1.9e-192 676.0 407 76.7
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 4.3e-192 674.9 405 77.3
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 4.3e-192 674.9 406 76.4
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 7.3e-192 674.1 404 75.7
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 7.3e-192 674.1 414 76.3
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 7.3e-192 674.1 391 79.3
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 9.6e-192 673.7 443 71.8
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 1.2e-191 673.3 406 76.8
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.6e-191 672.9 441 71.9
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.6e-191 672.9 405 76.3
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 2.1e-191 672.5 408 77.2
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.1e-191 672.5 404 77.7
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 2.1e-191 672.5 405 76.8
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.8e-191 672.2 407 77.6
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 2.8e-191 672.2 407 77.9
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 2.8e-191 672.2 447 71.8
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 2.8e-191 672.2 439 75.2
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 4.7e-191 671.4 364 82.1
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 8.1e-191 670.6 364 81.9
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 1.1e-190 670.2 442 71.7
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 1.1e-190 670.2 406 76.4
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 1.1e-190 670.2 407 76.4
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 1.1e-190 670.2 406 76.4
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 1.8e-190 669.5 446 74.9
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 3.1e-190 668.7 412 75.2
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 3.1e-190 668.7 409 75.3
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 4.0e-190 668.3 408 77.0
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 4.0e-190 668.3 412 74.5
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 5.3e-190 667.9 445 71.2
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 6.9e-190 667.5 406 76.8
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 9.0e-190 667.2 407 76.7
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 9.0e-190 667.2 406 77.3
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.2e-189 666.8 407 77.4
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 1.2e-189 666.8 412 74.5
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 2.0e-189 666.0 406 76.1
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 3.4e-189 665.2 446 70.6
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 4.4e-189 664.8 407 76.4
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 4.4e-189 664.8 407 75.9
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 4.4e-189 664.8 443 73.1
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 4.4e-189 664.8 409 74.8
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 7.6e-189 664.1 377 79.6
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 9.9e-189 663.7 379 79.9
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.3e-188 663.3 406 75.4
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 2.2e-188 662.5 405 75.8
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 2.2e-188 662.5 410 73.9
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 2.2e-188 662.5 410 75.1
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 8.4e-188 660.6 406 75.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.4e-187 659.8 513 64.7
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 1.9e-187 659.4 408 75.7
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 2.4e-187 659.1 408 75.7
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 4.2e-187 658.3 423 72.8
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 1.2e-186 656.8 406 74.9
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 6.0e-186 654.4 398 74.6
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 7.8e-186 654.1 406 75.1
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 3.0e-185 652.1 401 76.1
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 1.5e-184 649.8 433 73.7
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.5e-184 649.0 400 76.0
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 2.8e-183 645.6 438 71.5
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 3.1e-182 642.1 402 74.1
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 3.1e-182 642.1 447 68.5
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 6.9e-182 641.0 376 77.1
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.3e-180 636.7 408 71.6
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.9e-179 632.9 442 69.2
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 3.3e-176 622.1 405 70.9
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.1e-174 617.1 398 74.6
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.1e-174 617.1 419 69.9
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 1.4e-171 606.7 408 70.1
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 3.2e-171 605.5 322 84.8
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.8e-169 599.7 340 81.2
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 8.7e-169 597.4 399 71.4
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 2.1e-167 592.8 322 82.3
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 2.8e-167 592.4 407 69.3
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 1.6e-162 576.6 404 67.6
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 1.8e-161 573.2 334 75.1
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 9.0e-158 560.8 288 85.8
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 3.2e-155 552.4 288 84.4
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.1e-154 549.7 288 83.7
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 1.2e-146 523.9 286 80.4
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 1.8e-145 520.0 312 77.6
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.2e-141 507.3 334 65.9
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 1.5e-141 506.9 266 85.3
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.2e-138 497.3 401 66.8
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.6e-122 443.7 347 55.9
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 1.8e-121 440.3 307 70.4
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.2e-120 437.6 269 75.5
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 2.7e-117 426.4 285 66.0
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.6e-116 421.8 269 73.2
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 4.1e-110 402.5 346 50.9
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 7.5e-96 355.1 320 51.9
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.2e-93 347.8 244 69.7
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-86 324.7 338 45.9
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 6.2e-66 255.8 137 81.0
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 3.1e-65 253.4 179 66.5
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.2e-56 224.9 109 89.0
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 1.6e-53 214.5 122 77.0
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 4.6e-53 213.0 121 78.5
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 3.1e-49 200.3 139 65.5
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 7.2e-46 189.1 127 70.1
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 3.4e-32 143.7 84 77.4
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.0e-31 142.1 84 76.2
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 3.6e-29 133.7 80 73.8
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 1.6e-24 118.2 101 56.4
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 1.4e-12 78.6 52 67.3
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 5.5e-06 56.6 88 39.8


User provided reference genes

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