Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.4e-234 815.8 406 100.0
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.9e-226 788.9 406 97.0
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 5.4e-173 611.3 406 73.9
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 3.9e-171 605.1 406 72.9
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 1.2e-161 573.5 405 70.1
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 2.8e-161 572.4 406 71.2
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.4e-160 570.1 407 70.5
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.4e-160 570.1 409 69.9
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 1.2e-159 567.0 406 69.5
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 2.9e-158 562.4 406 70.9
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.4e-157 560.1 406 69.2
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 2.4e-157 559.3 406 68.2
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 2.4e-157 559.3 408 68.1
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 2.1e-156 556.2 406 68.2
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.7e-156 555.8 406 67.7
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.0e-155 553.9 407 67.6
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.3e-155 553.5 406 68.2
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.3e-155 553.5 406 67.7
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.7e-155 553.1 407 68.6
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.7e-155 553.1 406 68.0
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.3e-155 552.7 406 68.2
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 1.1e-154 550.4 406 69.0
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 2.5e-154 549.3 409 67.5
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 2.5e-154 549.3 406 69.0
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 5.6e-154 548.1 406 66.3
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 9.5e-154 547.4 415 67.0
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.2e-153 547.0 406 66.7
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 2.8e-153 545.8 418 65.8
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 2.8e-153 545.8 406 69.5
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 3.6e-153 545.4 407 67.1
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 1.1e-152 543.9 408 66.2
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.1e-152 543.9 406 67.0
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 5.2e-152 541.6 406 65.8
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 6.8e-152 541.2 452 63.7
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 1.5e-151 540.0 406 67.5
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 2.0e-151 539.7 407 66.6
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 3.4e-151 538.9 406 66.3
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.4e-151 538.9 407 66.3
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 5.8e-151 538.1 406 66.5
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 5.8e-151 538.1 407 66.8
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 1.3e-150 537.0 408 66.2
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.3e-150 537.0 407 67.6
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 1.7e-150 536.6 421 64.6
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 3.8e-150 535.4 409 66.5
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.9e-149 533.1 412 65.3
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 4.1e-149 531.9 406 65.3
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 5.4e-149 531.6 408 65.4
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 1.2e-148 530.4 411 65.9
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 1.2e-148 530.4 410 67.1
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.7e-148 529.3 407 66.8
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 2.7e-148 529.3 401 65.8
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 4.6e-148 528.5 413 65.1
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 6.0e-148 528.1 406 65.0
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.0e-147 527.3 406 64.8
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 3.0e-147 525.8 406 61.6
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 4.3e-146 521.9 429 63.6
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 5.6e-146 521.5 408 64.0
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 5.6e-146 521.5 408 64.0
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 1.6e-145 520.0 412 64.3
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.6e-145 520.0 408 65.4
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 3.6e-145 518.8 453 61.4
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 8.1e-145 517.7 406 65.3
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 8.1e-145 517.7 414 64.5
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 1.1e-144 517.3 410 63.4
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 1.1e-144 517.3 410 63.4
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 2.4e-144 516.2 409 63.8
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 4.0e-144 515.4 410 63.9
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 6.9e-144 514.6 406 64.8
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.5e-143 513.5 408 64.0
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.5e-143 513.5 397 64.0
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.5e-143 513.5 412 61.4
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 2.0e-143 513.1 408 64.5
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 2.0e-143 513.1 485 57.3
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 4.4e-143 511.9 410 64.1
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.3e-142 510.4 409 62.6
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 2.2e-142 509.6 408 63.5
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.2e-142 509.6 400 64.5
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.8e-142 508.8 410 64.1
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.9e-142 508.4 406 64.0
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.9e-142 508.4 408 63.2
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 8.4e-142 507.7 409 63.8
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 7.8e-140 501.1 431 60.8
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 1.1e-136 490.7 365 67.1
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 7.6e-135 484.6 406 59.9
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 7.6e-135 484.6 402 61.2
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 6.4e-134 481.5 346 68.2
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.5e-132 475.7 406 60.8
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 6.0e-132 474.9 400 61.0
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 6.0e-132 474.9 437 59.3
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 6.0e-132 474.9 437 59.3
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 7.9e-132 474.6 407 60.0
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.0e-131 472.6 407 61.2
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 3.9e-131 472.2 402 61.9
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 6.7e-131 471.5 368 66.0
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.6e-130 468.4 365 64.1
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 1.3e-129 467.2 400 59.5
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.6e-129 466.8 400 61.0
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.1e-129 466.5 390 59.2
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.4e-128 463.8 399 60.4
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 6.9e-128 461.5 400 59.0
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 2.6e-127 459.5 318 69.5
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 7.6e-127 458.0 396 60.6
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 1.3e-126 457.2 409 59.4
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 1.3e-123 447.2 334 65.6
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.8e-123 446.8 402 58.0
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 5.1e-123 445.3 399 57.9
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 6.7e-123 444.9 402 58.0
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.1e-122 444.1 399 57.6
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 4.3e-122 442.2 406 58.4
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 5.6e-122 441.8 403 55.8
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 7.4e-122 441.4 400 58.5
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 3.4e-119 432.6 385 57.4
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 3.4e-119 432.6 391 58.1
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 7.1e-117 424.9 403 56.6
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 1.4e-112 410.6 406 54.4
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 1.4e-112 410.6 328 61.3
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 6.5e-110 401.7 404 54.7
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 2.5e-109 399.8 404 52.7
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 4.2e-109 399.1 387 53.7
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 9.4e-109 397.9 404 52.7
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 6.1e-108 395.2 404 54.5
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.9e-107 392.5 404 54.2
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 5.1e-107 392.1 321 60.1
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 2.0e-106 390.2 404 52.2
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 3.3e-106 389.4 374 55.1
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 3.3e-106 389.4 374 55.1
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 7.4e-106 388.3 363 56.2
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 7.4e-106 388.3 374 54.8
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 1.8e-104 383.6 399 51.9
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.8e-104 383.6 253 71.5
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 1.3e-102 377.5 408 54.2
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 2.5e-101 373.2 360 55.6
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 3.3e-98 362.8 261 71.3
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 5.7e-98 362.1 394 50.0
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.8e-96 357.1 340 56.2
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.1e-96 355.9 263 68.1
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.9e-93 347.1 273 61.5
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 9.4e-93 344.7 394 47.2
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 6.1e-92 342.0 342 54.1
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.9e-91 339.3 277 62.1
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.8e-89 332.4 253 63.6
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.0e-86 324.7 230 68.3
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.2e-85 319.3 258 61.2
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 5.5e-85 318.9 406 43.6
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 7.5e-82 308.5 401 43.6
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 2.2e-81 307.0 411 43.3
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 5.3e-80 302.4 267 58.4
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 1.5e-69 267.7 282 52.1
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.7e-65 254.2 365 43.0
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.7e-63 246.9 194 63.9
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.3e-62 243.8 158 70.9
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 9.5e-61 238.4 428 36.4
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 3.2e-40 170.2 369 33.6
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.1e-37 161.8 128 64.8
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 4.3e-37 159.8 452 29.0
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 4.3e-37 159.8 136 62.5
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 1.6e-36 157.9 130 64.6
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.0e-34 151.0 106 63.2
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 1.3e-33 148.3 333 29.7
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.1e-28 131.0 133 53.4
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 1.1e-27 128.6 376 30.6
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 2.4e-27 127.5 304 32.2
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 2.0e-26 124.4 304 31.2
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 5.1e-22 109.8 67 79.1
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 3.3e-21 107.1 110 49.1
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.6e-20 104.8 94 59.6
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 2.1e-15 87.8 112 46.4
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 6.9e-11 72.8 61 60.7
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.9e-09 67.4 67 55.2
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 1.9e-08 64.7 44 75.0
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 7.1e-08 62.8 37 81.1
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 1.3e-06 58.5 131 32.1
C02p60980 Brassica napus HOM05D003933 ORTHO05D004746 3.9e-06 57.0 49 61.2
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.9e-06 57.0 61 52.5


User provided reference genes

Program Settings