Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 4.9e-58 227.6 118 100.0
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 3.5e-56 221.5 118 97.5
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 3.9e-23 111.7 115 55.7
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 1.1e-22 110.2 79 67.1
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.6e-21 106.3 115 54.8
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.2e-21 104.4 115 53.9
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 6.2e-21 104.4 115 53.9
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 2.4e-20 102.4 115 53.0
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.4e-20 102.4 115 53.0
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.4e-20 102.4 115 53.0
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 2.4e-20 102.4 116 51.7
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 5.3e-20 101.3 115 52.2
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 6.9e-20 100.9 116 54.3
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 1.5e-19 99.8 106 51.9
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 1.5e-19 99.8 115 51.3
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 3.4e-19 98.6 115 51.3
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 5.8e-19 97.8 115 51.3
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 5.8e-19 97.8 115 51.3
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 5.8e-19 97.8 99 54.5
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 1.7e-18 96.3 117 47.9
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 1.7e-18 96.3 118 48.3
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 3.8e-18 95.1 66 66.7
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 8.4e-18 94.0 103 50.5
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 1.4e-17 93.2 103 48.5
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 5.4e-17 91.3 106 49.1
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 5.4e-17 91.3 106 49.1
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 7.1e-17 90.9 65 61.5
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 1.2e-16 90.1 97 51.5
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 1.6e-16 89.7 115 47.0
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 2.1e-16 89.4 98 52.0
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 3.5e-16 88.6 98 52.0
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 6.0e-16 87.8 114 47.4
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 7.9e-16 87.4 98 52.0
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 7.9e-16 87.4 96 53.1
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 1.8e-15 86.3 74 59.5
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 1.8e-15 86.3 102 51.0
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 2.3e-15 85.9 103 49.5
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 2.3e-15 85.9 94 54.3
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 2.3e-15 85.9 115 46.1
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 2.3e-15 85.9 104 52.9
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 3.0e-15 85.5 107 48.6
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 3.0e-15 85.5 72 58.3
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 3.9e-15 85.1 98 50.0
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 3.9e-15 85.1 89 53.9
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 3.9e-15 85.1 106 46.2
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 5.1e-15 84.7 107 48.6
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 5.1e-15 84.7 115 45.2
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 6.7e-15 84.3 107 46.7
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 6.7e-15 84.3 57 70.2
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 8.7e-15 84.0 94 51.1
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 1.1e-14 83.6 102 44.1
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.1e-14 83.6 89 52.8
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 1.5e-14 83.2 93 55.9
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 1.5e-14 83.2 115 44.3
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.9e-14 82.8 101 49.5
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 1.9e-14 82.8 111 45.0
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 2.5e-14 82.4 102 46.1
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 2.5e-14 82.4 106 50.0
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 3.3e-14 82.0 100 51.0
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 4.3e-14 81.6 65 61.5
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 5.6e-14 81.3 106 44.3
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 9.6e-14 80.5 101 47.5
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 9.6e-14 80.5 93 50.5
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 9.6e-14 80.5 106 43.4
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 9.6e-14 80.5 101 47.5
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 1.3e-13 80.1 114 41.2
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 1.6e-13 79.7 97 49.5
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 1.6e-13 79.7 106 44.3
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 3.7e-13 78.6 104 45.2
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 3.7e-13 78.6 91 52.7
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 4.8e-13 78.2 108 43.5
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 1.1e-12 77.0 106 44.3
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 3.1e-12 75.5 106 40.6
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 4.0e-12 75.1 98 43.9
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 4.0e-12 75.1 55 58.2
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 6.9e-12 74.3 103 46.6
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 6.9e-12 74.3 115 41.7
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.2e-11 73.6 104 47.1
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.2e-11 73.6 104 47.1
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 1.2e-11 73.6 106 41.5
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 1.2e-11 73.6 106 41.5
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 2.6e-11 72.4 102 40.2
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 2.6e-11 72.4 51 68.6
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 2.6e-11 72.4 95 49.5
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 5.8e-11 71.2 104 42.3
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 5.8e-11 71.2 105 39.0
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 1.3e-10 70.1 99 43.4
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 1.3e-10 70.1 99 43.4
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 2.2e-10 69.3 106 39.6
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 2.9e-10 68.9 176 36.4
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 4.9e-10 68.2 98 39.8
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 4.9e-10 68.2 52 57.7
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 6.4e-10 67.8 51 64.7
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 1.1e-09 67.0 57 52.6
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 3.2e-09 65.5 94 46.8
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 4.2e-09 65.1 113 38.1
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 2.7e-08 62.4 48 58.3
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 6.0e-08 61.2 94 43.6
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 1.3e-07 60.1 115 36.5
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 2.5e-06 55.8 89 41.6
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 3.3e-06 55.5 45 53.3


User provided reference genes

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