Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 2.1e-236 822.0 421 100.0
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 7.4e-226 786.9 419 95.9
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 1.1e-224 783.1 421 95.2
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 9.0e-155 550.8 408 68.6
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 2.0e-154 549.7 408 68.6
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 2.6e-154 549.3 408 69.4
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 2.2e-153 546.2 408 68.4
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.8e-153 545.4 410 69.8
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.4e-152 543.5 402 68.4
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.7e-150 536.6 404 70.3
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 3.9e-150 535.4 408 67.2
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 3.6e-148 528.9 408 66.9
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 6.2e-148 528.1 404 66.3
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.4e-147 526.9 408 64.0
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 1.4e-147 526.9 401 65.6
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 6.9e-147 524.6 408 64.7
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.5e-146 523.5 408 64.2
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.0e-146 523.1 430 64.7
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 2.0e-146 523.1 408 64.7
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 4.5e-146 521.9 408 64.7
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 6.4e-145 518.1 408 65.9
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.9e-144 516.5 423 62.9
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.2e-144 515.8 402 65.4
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 4.2e-144 515.4 402 65.4
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 9.3e-144 514.2 400 67.0
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 1.2e-143 513.8 403 64.8
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 1.6e-143 513.5 408 63.7
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.7e-143 512.7 402 64.9
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.7e-143 512.7 402 65.2
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.7e-143 512.7 408 63.7
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 3.5e-143 512.3 407 64.6
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 4.6e-143 511.9 399 66.7
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 7.9e-143 511.1 401 64.3
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.0e-142 510.8 408 63.7
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 3.9e-142 508.8 415 64.3
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 3.9e-142 508.8 438 61.6
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 6.7e-142 508.1 400 64.0
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.1e-141 507.3 402 63.9
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 1.5e-141 506.9 401 66.1
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 3.3e-141 505.8 408 63.5
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 4.3e-141 505.4 399 63.4
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 1.6e-140 503.4 404 63.9
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 2.1e-140 503.1 402 64.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 3.7e-140 502.3 400 64.0
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 4.8e-140 501.9 400 65.2
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 4.8e-140 501.9 411 64.2
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 1.4e-139 500.4 402 64.2
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.0e-139 498.8 404 63.6
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.5e-138 496.9 402 63.7
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 2.0e-138 496.5 400 65.5
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 2.0e-138 496.5 403 64.5
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.6e-138 496.1 397 64.5
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 1.7e-137 493.4 417 63.5
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 3.8e-137 492.3 401 61.6
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 3.8e-137 492.3 402 63.2
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 6.4e-137 491.5 408 62.7
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 7.1e-136 488.0 407 60.4
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 9.3e-136 487.6 401 63.8
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 1.2e-135 487.3 407 60.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.6e-135 486.9 407 60.9
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 1.6e-135 486.9 407 61.2
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.6e-135 486.9 462 56.5
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.1e-135 486.5 411 63.5
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 3.5e-135 485.7 400 63.8
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.0e-135 485.0 445 59.3
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 7.9e-135 484.6 406 61.8
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 5.1e-134 481.9 444 58.8
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.5e-133 480.3 401 59.9
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.3e-132 477.2 408 61.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.6e-132 476.9 430 58.4
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 4.8e-132 475.3 455 56.5
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 8.2e-132 474.6 430 57.9
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 1.1e-131 474.2 430 57.9
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 5.8e-130 468.4 408 61.3
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 2.2e-129 466.5 403 63.3
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 4.9e-129 465.3 402 59.7
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 7.1e-128 461.5 401 59.1
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 2.7e-127 459.5 460 53.9
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 1.9e-125 453.4 404 58.9
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 2.5e-125 453.0 485 52.0
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 6.3e-124 448.4 443 55.1
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.1e-123 447.6 413 56.7
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 1.8e-123 446.8 238 95.8
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 4.1e-123 445.7 402 59.0
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.5e-122 443.7 406 57.6
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.0e-121 441.0 412 55.8
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.3e-121 440.7 423 57.9
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 8.5e-121 438.0 432 56.5
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 4.6e-119 432.2 305 71.1
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 4.6e-119 432.2 360 63.3
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 6.7e-118 428.3 428 53.3
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 6.7e-118 428.3 373 60.9
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 7.4e-117 424.9 326 67.5
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 6.1e-111 405.2 401 55.1
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-110 404.1 336 64.3
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 2.3e-110 403.3 459 52.9
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 2.4e-107 393.3 316 67.4
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 3.1e-107 392.9 424 52.8
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 5.3e-107 392.1 404 53.7
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.3e-91 339.0 234 73.1
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.2e-90 337.8 401 49.1
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 2.9e-89 333.2 406 47.0
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.5e-88 330.1 275 62.9
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.2e-88 329.3 208 76.9
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 4.7e-87 325.9 406 47.5
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 8.0e-87 325.1 223 74.9
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 3.0e-86 323.2 256 64.1
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 8.8e-86 321.6 384 48.4
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 4.1e-83 312.8 274 59.5
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 4.4e-77 292.7 269 60.2
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 2.8e-71 273.5 368 45.9
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.8e-71 273.5 314 50.0
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.7e-68 264.2 359 46.0
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 6.0e-66 255.8 241 55.2
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 4.4e-61 239.6 310 44.5
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 3.2e-59 233.4 244 50.0
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 4.0e-54 216.5 396 35.4
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 5.8e-53 212.6 144 70.1
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 4.3e-48 196.4 167 62.3
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.1e-46 191.8 125 76.0
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 1.1e-46 191.8 153 64.7
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.2e-44 184.1 181 54.7
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 2.6e-37 160.6 137 62.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 3.4e-37 160.2 400 32.0
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 8.4e-36 155.6 307 36.2
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.5e-32 144.8 107 70.1
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 9.6e-32 142.1 151 52.3
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 1.2e-29 135.2 88 76.1
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 1.3e-25 121.7 94 63.8
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 2.1e-23 114.4 358 30.2
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.2e-20 104.4 97 54.6
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 3.2e-19 100.5 218 32.6
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 6.0e-18 96.3 113 51.3
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 1.5e-16 91.7 90 53.3
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.2e-15 86.3 65 61.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.1e-14 84.0 79 51.9
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 8.4e-12 75.9 54 68.5


User provided reference genes

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