Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.2e-118 429.9 223 100.0
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 5.3e-98 361.3 246 78.5
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 1.6e-94 349.7 221 80.5
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.2e-93 344.7 218 79.8
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.5e-92 343.2 222 77.5
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 4.4e-92 341.7 220 78.6
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 5.7e-92 341.3 216 79.6
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 2.2e-91 339.3 207 82.6
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.8e-91 339.0 218 78.0
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 4.8e-91 338.2 220 78.6
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.4e-90 335.9 220 78.2
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 3.1e-90 335.5 217 76.5
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 4.1e-90 335.1 235 74.5
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 4.1e-90 335.1 218 77.1
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.3e-90 334.7 222 75.2
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.0e-90 334.3 220 76.4
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.2e-89 333.6 218 76.6
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.0e-89 332.8 220 75.9
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 2.7e-89 332.4 218 76.1
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.7e-89 332.4 222 75.2
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 2.7e-89 332.4 220 77.7
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 3.5e-89 332.0 218 76.6
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 7.7e-89 330.9 218 76.6
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 7.7e-89 330.9 222 75.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.0e-88 330.5 222 74.3
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.3e-88 330.1 224 75.0
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.2e-88 329.3 216 75.9
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 5.0e-88 328.2 222 74.3
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 6.5e-88 327.8 218 75.2
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 8.5e-88 327.4 221 74.2
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.1e-87 327.0 225 73.8
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.5e-87 326.6 218 75.2
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.5e-87 325.9 223 73.1
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 3.2e-87 325.5 220 73.6
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 4.2e-87 325.1 223 73.1
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 5.5e-87 324.7 223 73.5
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 7.2e-87 324.3 223 73.1
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 7.2e-87 324.3 221 73.8
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 9.4e-87 323.9 221 74.7
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 9.4e-87 323.9 224 74.1
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.2e-86 323.6 219 74.4
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 2.7e-86 322.4 221 74.2
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.7e-86 322.4 215 75.8
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 3.6e-86 322.0 218 74.3
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 4.7e-86 321.6 215 74.4
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 6.1e-86 321.2 219 74.4
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 6.1e-86 321.2 212 75.5
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 8.0e-86 320.9 218 74.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.0e-85 320.5 223 72.2
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.8e-85 319.7 219 73.5
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.3e-85 319.3 219 73.5
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 3.0e-85 318.9 222 75.7
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 8.8e-85 317.4 223 73.1
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.5e-84 316.6 218 73.4
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 2.0e-84 316.2 216 74.1
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.6e-84 315.8 246 67.1
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 2.6e-84 315.8 222 71.6
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 5.7e-84 314.7 223 71.3
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 7.5e-84 314.3 218 72.5
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.3e-83 313.5 216 73.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.3e-83 313.5 216 73.1
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.7e-83 313.2 219 73.1
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 2.2e-83 312.8 224 71.0
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.8e-83 312.4 220 72.3
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.7e-83 312.0 216 72.7
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 8.3e-83 310.8 222 70.7
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.4e-82 308.1 221 71.5
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.2e-81 307.0 216 72.2
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 2.0e-81 306.2 216 71.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.9e-81 304.7 218 72.5
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 6.5e-80 301.2 200 77.5
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.1e-79 300.4 219 68.9
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.2e-79 298.9 223 69.5
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 4.2e-79 298.5 219 70.8
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 7.2e-79 297.7 194 75.3
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 2.7e-78 295.8 225 68.0
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.4e-77 293.5 220 68.2
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.3e-77 292.7 218 71.1
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 2.3e-77 292.7 257 63.8
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 4.0e-77 292.0 218 68.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 5.2e-77 291.6 218 68.3
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.2e-73 280.4 221 65.6
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 2.0e-73 279.6 201 73.1
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 4.5e-73 278.5 225 64.0
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 8.6e-72 274.2 190 73.2
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.3e-71 272.3 207 68.1
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 7.3e-71 271.2 255 60.0
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.2e-70 270.4 231 64.5
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.1e-70 269.6 178 75.8
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.8e-70 269.2 220 65.0
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 3.6e-70 268.9 251 60.6
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.7e-70 268.5 215 65.1
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.7e-67 258.8 207 65.2
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.1e-66 257.3 226 63.7
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 4.7e-62 241.9 216 60.2
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.7e-59 233.4 153 75.8
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 3.7e-59 232.3 154 73.4
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.7e-59 232.3 208 60.6
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 1.7e-56 223.4 157 70.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.9e-56 222.2 268 51.1
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 5.0e-56 221.9 219 54.8
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 2.1e-54 216.5 232 53.9
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 7.5e-52 208.0 192 60.9
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.0e-48 197.6 162 64.2
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 5.6e-47 191.8 226 49.1
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 2.1e-46 189.9 143 63.6
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.8e-45 186.8 201 55.2
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 6.0e-41 171.8 224 43.8
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.7e-40 170.2 150 54.7
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 5.4e-34 148.7 390 32.3
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.4e-34 148.7 122 62.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.2e-33 147.5 85 81.2
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.8e-27 125.9 84 70.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 4.0e-21 105.9 70 70.0
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.4e-19 98.2 142 48.6
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.9e-18 97.1 96 51.0
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 2.1e-17 93.6 51 86.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.9e-16 89.4 71 64.8
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 8.7e-16 88.2 61 78.7
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 9.6e-15 84.7 62 74.2
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 2.8e-14 83.2 60 75.0
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 9.0e-13 78.2 191 31.9
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-11 74.3 99 42.4
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 4.9e-11 72.4 50 74.0
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.8e-08 63.9 54 63.0
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 9.6e-07 58.2 53 62.3


User provided reference genes

Program Settings