Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 8.1e-31 136.3 65 100.0
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 7.4e-24 113.2 62 83.9
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 6.2e-23 110.2 59 84.7
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 1.8e-22 108.6 65 80.0
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 3.1e-22 107.8 59 84.7
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 4.0e-22 107.5 61 82.0
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.0e-22 107.5 58 84.5
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 4.0e-22 107.5 58 84.5
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 4.0e-22 107.5 58 84.5
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 9.0e-22 106.3 58 82.8
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.2e-21 105.9 65 78.5
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 81.0
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 82.8
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.5e-21 105.5 62 77.4
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.0e-21 105.1 59 81.4
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 2.6e-21 104.8 59 78.0
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 3.4e-21 104.4 58 81.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 5.8e-21 103.6 65 73.8
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 7.6e-21 103.2 59 78.0
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 1.0e-20 102.8 65 72.3
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.0e-20 102.8 62 75.8
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.3e-20 102.4 59 78.0
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.3e-20 102.4 58 81.0
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.3e-20 102.4 59 78.0
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.7e-20 102.1 59 76.3
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 2.2e-20 101.7 59 78.0
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.2e-20 101.7 62 71.0
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 76.3
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 78.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 78.0
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 76.3
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 76.3
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 2.9e-20 101.3 59 78.0
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 8.4e-20 99.8 59 78.0
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 8.4e-20 99.8 59 78.0
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 8.4e-20 99.8 63 69.8
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 8.4e-20 99.8 62 74.2
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.4e-19 99.0 57 77.2
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.4e-19 99.0 61 70.5
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 3.2e-19 97.8 59 76.3
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 3.2e-19 97.8 64 71.9
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 4.2e-19 97.4 54 77.8
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 5.5e-19 97.1 59 74.6
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 5.5e-19 97.1 59 74.6
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 5.5e-19 97.1 58 74.1
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.2e-18 95.9 65 72.3
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 1.6e-18 95.5 69 66.7
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 7.9e-18 93.2 64 67.2
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.0e-17 92.8 54 75.9
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.8e-17 92.0 67 65.7
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 3.9e-17 90.9 55 72.7
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 3.9e-17 90.9 65 66.2
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 8.7e-17 89.7 57 66.7
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 8.7e-17 89.7 58 70.7
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 4.3e-16 87.4 58 70.7
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 5.7e-16 87.0 59 64.4
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 3.7e-15 84.3 59 71.2
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.3e-12 75.9 59 64.4
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 2.9e-12 74.7 62 56.5
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 1.1e-11 72.8 58 48.3
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 3.2e-11 71.2 45 68.9
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 3.5e-10 67.8 61 54.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 1.3e-09 65.9 41 73.2
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.8e-09 65.5 58 56.9
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 3.0e-09 64.7 59 57.6
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 8.7e-09 63.2 59 55.9
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 8.7e-09 63.2 59 55.9
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 1.1e-08 62.8 65 55.4
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.5e-08 62.4 57 50.9
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 4.3e-08 60.8 59 54.2
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 9.7e-08 59.7 59 52.5
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.6e-07 58.9 35 71.4
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 5.3e-06 53.9 58 48.3


User provided reference genes

Program Settings