Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 0.0e+00 1293.9 665 100.0
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 0.0e+00 1275.4 665 98.3
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.1e-300 1036.2 660 77.0
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.2e-299 1032.7 660 77.9
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 5.2e-298 1027.3 650 77.5
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 3.3e-297 1024.6 657 76.6
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 3.3e-297 1024.6 658 77.2
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.0e-293 1013.1 657 76.6
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 3.8e-293 1011.1 651 75.3
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 5.0e-293 1010.7 662 77.3
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 5.0e-293 1010.7 657 76.4
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 1.9e-292 1008.8 659 74.7
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 3.2e-292 1008.1 662 75.2
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.6e-291 1005.7 661 76.4
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 2.1e-291 1005.4 659 74.4
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.7e-291 1005.0 668 75.3
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 6.1e-291 1003.8 673 75.0
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 6.7e-290 1000.3 661 74.7
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 8.8e-290 1000.0 652 75.2
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.6e-289 998.4 652 74.8
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 1.1e-287 993.0 652 75.2
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 4.1e-287 991.1 676 74.0
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 7.0e-287 990.3 656 75.0
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 2.0e-286 988.8 649 74.6
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 2.0e-286 988.8 660 75.0
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 1.5e-284 982.6 677 73.7
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.7e-283 978.4 660 73.9
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 4.7e-283 977.6 659 73.7
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 8.0e-283 976.9 658 74.0
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 4.0e-282 974.5 600 79.5
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 1.2e-281 973.0 656 73.3
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.0e-281 972.2 660 73.3
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.6e-281 971.8 656 73.0
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.8e-279 965.7 651 74.3
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 3.1e-279 964.9 653 73.2
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 4.1e-279 964.5 650 73.4
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 7.0e-279 963.8 656 72.9
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 5.9e-278 960.7 656 73.2
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.3e-277 958.7 651 72.7
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 1.1e-276 956.4 599 78.1
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 1.9e-276 955.7 617 76.0
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 1.9e-276 955.7 653 72.9
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 5.5e-276 954.1 656 72.9
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 2.1e-275 952.2 659 71.6
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 2.8e-275 951.8 652 71.8
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 6.1e-275 950.7 651 72.0
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 6.8e-274 947.2 657 71.4
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 1.5e-273 946.0 661 70.2
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.0e-273 945.7 658 71.4
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 3.4e-273 944.9 657 71.5
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 3.4e-273 944.9 656 70.9
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 5.7e-273 944.1 653 72.1
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 7.5e-273 943.7 648 72.2
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 4.9e-272 941.0 654 71.9
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 6.3e-272 940.6 658 71.7
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.4e-271 939.5 654 70.6
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.8e-271 939.1 648 70.7
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 2.4e-271 938.7 654 71.4
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 2.4e-271 938.7 654 70.8
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 9.2e-271 936.8 654 70.5
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.0e-270 935.6 653 71.1
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 1.3e-269 932.9 604 76.5
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 2.9e-269 931.8 654 71.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 1.5e-268 929.5 658 69.6
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 7.3e-268 927.2 665 69.9
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.0e-266 923.3 650 70.6
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 3.0e-266 921.8 648 70.4
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 3.0e-266 921.8 656 70.3
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 8.9e-266 920.2 648 69.8
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 4.4e-265 917.9 603 74.0
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.7e-264 916.0 651 69.6
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 6.4e-264 914.1 602 74.8
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 8.3e-264 913.7 655 70.4
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 1.1e-263 913.3 602 74.9
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 2.4e-263 912.1 652 68.6
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 5.4e-263 911.0 650 68.6
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 2.8e-259 898.7 657 69.7
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 2.3e-258 895.6 657 69.3
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 6.8e-258 894.0 600 73.5
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 1.2e-257 893.3 658 69.5
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 2.6e-257 892.1 599 72.3
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 4.4e-257 891.3 657 68.5
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 3.7e-256 888.3 657 69.9
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 4.9e-256 887.9 603 71.1
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 2.4e-255 885.6 603 71.1
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 5.4e-255 884.4 675 68.0
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.6e-254 882.9 654 68.2
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 3.5e-254 881.7 722 62.2
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 4.6e-254 881.3 648 67.0
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 7.8e-254 880.6 658 69.9
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 1.2e-251 873.2 654 67.9
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 2.0e-249 865.9 601 69.9
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 2.9e-248 862.1 526 79.7
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 1.2e-230 803.5 639 63.5
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 3.5e-230 802.0 652 62.6
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.6e-222 776.5 791 52.8
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 6.0e-222 774.6 518 73.4
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.0e-221 773.9 665 60.9
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 9.6e-220 767.3 652 62.4
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.1e-215 751.1 764 50.8
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 4.6e-214 748.4 747 51.1
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 8.2e-211 737.6 656 59.6
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.8e-210 736.5 820 49.6
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 9.3e-207 724.2 855 45.6
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 4.6e-206 721.8 445 79.8
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.1e-199 700.7 612 59.3
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 5.1e-197 691.8 460 75.4
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.3e-192 677.2 654 52.9
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.7e-187 660.2 423 77.5
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.2e-177 627.5 542 60.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 6.8e-165 585.1 307 99.7
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 3.7e-163 579.3 547 54.8
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.5e-159 566.6 419 68.5
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.3e-127 459.5 394 61.2
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 9.9e-108 395.2 262 74.0
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 8.4e-107 392.1 339 60.5
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.4e-93 348.2 247 68.8
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.0e-88 332.0 216 75.9
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.6e-81 308.1 338 49.4
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 6.1e-81 306.2 553 39.2
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 1.4e-64 251.9 153 77.8
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 8.9e-40 169.5 126 63.5
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.0e-39 168.3 140 60.0
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.2e-36 159.1 438 29.0
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 6.0e-12 77.0 59 64.4
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 6.6e-11 73.6 49 77.6
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.3e-10 70.9 47 66.0
Lj9A429T53 Lonicera japonica HOM05D005975 ORTHO05D007373 1.4e-08 65.9 42 71.4
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 1.8e-08 65.5 47 68.1


User provided reference genes

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