Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2536 Papaver somniferum HOM05D004631 ORTHO05D005223 3.9e-51 204.5 104 100.0
PSO782G2324 Papaver somniferum HOM05D004631 ORTHO05D005223 1.3e-19 99.8 58 84.5
PSO063G4908 Papaver somniferum HOM05D004631 ORTHO05D005223 1.8e-19 99.4 58 84.5
Glyma.16G063100 Glycine max HOM05D004631 ORTHO05D005223 2.0e-10 69.3 80 48.8
Glyma.19G082400 Glycine max HOM05D004631 ORTHO05D005223 9.7e-10 67.0 68 52.9
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.4e-08 63.2 67 50.7
MBI05_g32279_MAGBIO Magnolia biondii HOM05D004631 ORTHO05D005223 1.4e-08 63.2 61 62.3
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 1.4e-08 63.2 64 51.6
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.8e-08 62.8 61 52.5
Cc07_g00410 Coffea canephora HOM05D004631 ORTHO05D005223 4.1e-08 61.6 61 54.1
Nn4g22438 Nelumbo nucifera HOM05D004631 ORTHO05D005223 4.1e-08 61.6 63 50.8
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 4.1e-08 61.6 80 45.0
ClCG11G006850 Citrullus lanatus HOM05D004631 ORTHO05D005223 9.1e-08 60.5 66 45.5
FAN05G1873 Fragaria x ananassa HOM05D004631 ORTHO05D005223 9.1e-08 60.5 77 45.5
FAN09G3073 Fragaria x ananassa HOM05D004631 ORTHO05D005223 9.1e-08 60.5 77 45.5
Eucgr.I01692 Eucalyptus grandis HOM05D004631 ORTHO05D005223 1.2e-07 60.1 58 50.0
QL02p072911 Quercus lobata HOM05D004631 ORTHO05D005223 1.2e-07 60.1 73 46.6
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.5e-07 59.7 82 43.9
CsaV3_6G001200 Cucumis sativus L. HOM05D004631 ORTHO05D005223 1.5e-07 59.7 62 50.0
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 1.5e-07 59.7 77 45.5
FAN14G1903 Fragaria x ananassa HOM05D004631 ORTHO05D005223 1.5e-07 59.7 77 45.5
Cfa007277 Carpinus fangiana HOM05D004631 ORTHO05D005223 2.0e-07 59.3 87 43.7
CiPaw.03G050500 Carya illinoinensis HOM05D004631 ORTHO05D005223 2.6e-07 58.9 78 46.2
Haze_14815 Corylus avellana HOM05D004631 ORTHO05D005223 2.6e-07 58.9 69 43.5
FAN02G2863 Fragaria x ananassa HOM05D004631 ORTHO05D005223 2.6e-07 58.9 77 44.2
HanXRQChr17g0549531 Helianthus annuus HOM05D004631 ORTHO05D005223 2.6e-07 58.9 61 49.2
Peaxi162Scf00420g00342 Petunia axillaris HOM05D004631 ORTHO05D005223 2.6e-07 58.9 57 50.9
Peaxi162Scf00420g00345 Petunia axillaris HOM05D004631 ORTHO05D005223 2.6e-07 58.9 57 50.9
Atru.chr6.2487 Acer truncatum HOM05D004631 ORTHO05D005223 3.4e-07 58.5 84 41.7
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 3.4e-07 58.5 66 51.5
COL.COLO4_29276 Corchorus olitorius HOM05D004631 ORTHO05D005223 3.4e-07 58.5 57 54.4
Gohir.D10G085100 Gossypium hirsutum HOM05D004631 ORTHO05D005223 3.4e-07 58.5 58 51.7
Gorai.011G093000 Gossypium raimondii HOM05D004631 ORTHO05D005223 3.4e-07 58.5 58 50.0
CiPaw.04G033100 Carya illinoinensis HOM05D004631 ORTHO05D005223 4.5e-07 58.2 58 50.0
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 4.5e-07 58.2 64 48.4
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 4.5e-07 58.2 84 41.7
Gohir.A10G160500 Gossypium hirsutum HOM05D004631 ORTHO05D005223 5.9e-07 57.8 58 51.7
TWI59G0755 Tripterygium wilfordii HOM05D004631 ORTHO05D005223 5.9e-07 57.8 77 44.2
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 7.7e-07 57.4 77 45.5
Prupe.3G299600 Prunus persica HOM05D004631 ORTHO05D005223 1.0e-06 57.0 74 43.2
AL5G16540 Arabidopsis lyrata HOM05D004631 ORTHO05D005223 1.3e-06 56.6 65 47.7
Carub.0005s0558 Capsella rubella HOM05D004631 ORTHO05D005223 1.3e-06 56.6 69 43.5
Potri.001G264500 Populus trichocarpa HOM05D004631 ORTHO05D005223 1.3e-06 56.6 58 53.4
Sed0025843 Sechium edule HOM05D004631 ORTHO05D005223 1.3e-06 56.6 62 45.2
arahy.Tifrunner.gnm1.ann1.5W0L45 Arachis hypogaea HOM05D004631 ORTHO05D005223 1.7e-06 56.2 65 46.2
CARHR148590 Cardamine hirsuta HOM05D004631 ORTHO05D005223 1.7e-06 56.2 62 50.0
Cpa.g.c34704 Carica papaya HOM05D004631 ORTHO05D005223 1.7e-06 56.2 61 49.2
Hma1.2p1_0227F.1_g095910 Hydrangea macrophylla HOM05D004631 ORTHO05D005223 1.7e-06 56.2 81 44.4
TAR629G3282 Trochodendron aralioides HOM05D004631 ORTHO05D005223 2.2e-06 55.8 61 44.3
unitig_62.g23368 Utricularia gibba HOM05D004631 ORTHO05D005223 2.2e-06 55.8 55 47.3
AT3G27310 Arabidopsis thaliana HOM05D004631 ORTHO05D005223 2.9e-06 55.5 65 46.2
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 2.9e-06 55.5 66 43.9
Lj2g0014181 Lotus japonicus HOM05D004631 ORTHO05D005223 2.9e-06 55.5 53 50.9
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 2.9e-06 55.5 58 46.6
VMungo1383G3654 Vigna mungo HOM05D004631 ORTHO05D005223 2.9e-06 55.5 84 42.9
arahy.Tifrunner.gnm1.ann1.NS464T Arachis hypogaea HOM05D004631 ORTHO05D005223 3.8e-06 55.1 62 46.8
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 3.8e-06 55.1 84 42.9
Dinv33383 Davidia involucrata HOM05D004631 ORTHO05D005223 3.8e-06 55.1 63 46.0
Lsat_1_v5_gn_0_32720 Lactuca sativa HOM05D004631 ORTHO05D005223 3.8e-06 55.1 84 40.5
TPR.G29003 Trifolium pratense HOM05D004631 ORTHO05D005223 3.8e-06 55.1 57 45.6
vmacro18314 Vaccinium macrocarpon HOM05D004631 ORTHO05D005223 3.8e-06 55.1 68 47.1
Actinidia35792 Actinidia chinensis HOM05D004631 ORTHO05D005223 6.5e-06 54.3 57 50.9
Manes.07G089400 Manihot esculenta HOM05D004631 ORTHO05D005223 6.5e-06 54.3 58 46.6
Phvul.008G148800 Phaseolus vulgaris HOM05D004631 ORTHO05D005223 6.5e-06 54.3 67 43.3
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 6.5e-06 54.3 58 46.6
GSVIVG01001850001 Vitis vinifera HOM05D004631 ORTHO05D005223 6.5e-06 54.3 63 47.6
Sabra09G0043700 Salix brachista HOM05D004631 ORTHO05D005223 8.5e-06 53.9 74 41.9
TAR371G0552 Trochodendron aralioides HOM05D004631 ORTHO05D005223 8.5e-06 53.9 61 45.9


User provided reference genes

Program Settings