Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 2.7e-112 409.1 268 100.0
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.9e-33 147.1 142 52.1
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.2e-32 144.4 140 55.0
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 4.0e-31 139.4 144 54.9
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 4.8e-29 132.5 140 47.1
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.8e-28 130.6 145 49.0
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 3.1e-28 129.8 143 46.9
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 3.1e-28 129.8 140 45.0
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 5.3e-28 129.0 145 45.5
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 2.7e-27 126.7 141 46.1
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 7.7e-27 125.2 134 47.8
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-26 124.4 147 45.6
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 2.2e-26 123.6 146 48.6
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 6.5e-26 122.1 140 48.6
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 8.5e-26 121.7 138 47.1
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.1e-25 121.3 137 45.3
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.1e-25 121.3 140 48.6
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.5e-25 120.9 137 44.5
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.9e-25 120.6 137 43.8
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 1.9e-25 120.6 148 44.6
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 1.9e-25 120.6 148 44.6
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 4.2e-25 119.4 138 42.8
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 5.5e-25 119.0 140 45.7
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 5.5e-25 119.0 140 47.9
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 7.2e-25 118.6 150 42.7
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 9.4e-25 118.2 221 35.3
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 9.4e-25 118.2 151 42.4
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 1.2e-24 117.9 139 42.4
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.2e-24 117.9 138 44.9
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.2e-24 117.9 141 41.8
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 2.7e-24 116.7 142 45.1
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.1e-24 115.5 137 42.3
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 6.1e-24 115.5 143 44.8
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 6.1e-24 115.5 141 41.1
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 8.0e-24 115.2 142 42.3
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 3.0e-23 113.2 140 40.7
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 4.0e-23 112.8 137 44.5
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 5.2e-23 112.5 137 44.5
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 5.2e-23 112.5 140 42.1
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 1.2e-22 111.3 145 39.3
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 1.2e-22 111.3 142 40.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 2.0e-22 110.5 144 38.9
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 2.0e-22 110.5 144 39.6
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 2.0e-22 110.5 145 42.1
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 7.5e-22 108.6 146 39.0
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 7.5e-22 108.6 138 44.2
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 7.5e-22 108.6 146 35.6
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 9.8e-22 108.2 134 41.0
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 2.2e-21 107.1 150 38.0
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 3.7e-21 106.3 142 44.4
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.7e-21 106.3 143 35.7
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.8e-20 104.0 149 36.9
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 1.8e-20 104.0 144 41.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 4.1e-20 102.8 114 45.6
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 5.4e-20 102.4 147 39.5
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 7.0e-20 102.1 140 38.6
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 7.0e-20 102.1 151 37.1
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 9.1e-20 101.7 143 40.6
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 9.1e-20 101.7 114 44.7
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.0e-19 100.5 144 36.1
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.0e-19 100.5 153 33.3
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 2.7e-19 100.1 145 35.9
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 3.5e-19 99.8 155 33.5
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 3.5e-19 99.8 142 35.9
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 3.5e-19 99.8 142 35.9
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 4.5e-19 99.4 142 35.2
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.5e-19 99.4 150 34.7
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 4.5e-19 99.4 141 38.3
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 5.9e-19 99.0 142 35.2
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 5.9e-19 99.0 121 47.1
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 7.7e-19 98.6 142 40.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.3e-18 97.1 140 37.9
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 2.9e-18 96.7 137 35.8
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 2.9e-18 96.7 138 35.5
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 2.9e-18 96.7 137 36.5
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 3.8e-18 96.3 138 35.5
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 5.0e-18 95.9 138 35.5
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 8.6e-18 95.1 138 35.5
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.5e-17 94.4 135 35.6
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 2.5e-17 93.6 143 41.3
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 2.1e-16 90.5 112 42.9
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.4e-15 87.8 79 48.1
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 4.0e-15 86.3 76 50.0
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.2e-15 85.9 79 45.6
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 6.8e-15 85.5 138 36.2
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 2.0e-14 84.0 77 48.1
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.4e-14 83.2 111 41.4
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 4.4e-14 82.8 95 46.3
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 9.8e-14 81.6 132 34.8
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.4e-12 77.8 140 34.3
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 3.2e-12 76.6 134 35.8
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 5.4e-12 75.9 143 32.9
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 7.0e-12 75.5 135 34.8
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.6e-11 74.3 138 33.3
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.6e-11 74.3 138 33.3
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 2.0e-11 73.9 138 33.3
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 2.7e-11 73.6 150 34.0
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 3.5e-11 73.2 135 33.3
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 3.5e-11 73.2 135 33.3
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 3.5e-11 73.2 135 33.3
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 4.5e-11 72.8 135 33.3
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 4.5e-11 72.8 135 33.3
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 5.9e-11 72.4 93 44.1
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 2.9e-10 70.1 101 39.6
Pp3c3_10930 Physcomitrium patens HOM05D022662 ORTHO05D006223 3.9e-10 69.7 135 31.9
Pp3c6_3400 Physcomitrium patens HOM05D005423 ORTHO05D006223 2.5e-09 67.0 148 31.1
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.6e-09 65.9 144 30.6
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 2.8e-08 63.5 144 30.6
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 2.8e-08 63.5 108 32.4
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 6.1e-08 62.4 74 41.9
Nn8g39654 Nelumbo nucifera HOM05D005423 ORTHO05D006223 6.1e-08 62.4 108 34.3
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 8.0e-08 62.0 133 28.6
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 6.8e-07 58.9 131 29.8
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 2.6e-06 57.0 69 42.0
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 4.4e-06 56.2 87 33.3
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.4e-06 56.2 74 37.8
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 5.8e-06 55.8 104 34.6
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 7.5e-06 55.5 145 25.5
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 7.5e-06 55.5 116 32.8
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 9.8e-06 55.1 117 32.5
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 9.8e-06 55.1 145 26.2
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 9.8e-06 55.1 142 27.5
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 9.8e-06 55.1 114 33.3


User provided reference genes

Program Settings