Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2409 Papaver somniferum HOM05D005488 ORTHO05D006568 2.7e-68 261.9 136 100.0
PSO063G2958 Papaver somniferum HOM05D005488 ORTHO05D006568 8.1e-65 250.4 136 96.3
Nn6g33696 Nelumbo nucifera HOM05D005488 ORTHO05D006568 4.4e-55 218.0 136 80.9
Nitab4.5_0004088g0020 Nicotiana tabacum HOM05D005488 ORTHO05D006568 1.3e-54 216.5 136 80.1
Nitab4.5_0005064g0040 Nicotiana tabacum HOM05D005488 ORTHO05D006568 4.9e-54 214.5 136 79.4
PGSC0003DMG400001718 Solanum tuberosum HOM05D005488 ORTHO05D006568 8.4e-54 213.8 136 78.7
Solyc01g088610.4 Solanum lycopersicum HOM05D005488 ORTHO05D006568 5.4e-53 211.1 136 77.2
Oeu012019.1 Olea europaea HOM05D002442 ORTHO05D006568 1.2e-52 209.9 136 77.9
Cfa011024 Carpinus fangiana HOM05D005488 ORTHO05D006568 6.0e-52 207.6 136 77.9
Sopen01g035460 Solanum pennellii HOM05D005488 ORTHO05D006568 1.0e-51 206.8 136 75.7
Oeu034855.1 Olea europaea HOM05D005488 ORTHO05D006568 8.7e-51 203.8 136 75.0
CSS0036750 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.1e-50 203.4 135 74.8
CAN.G756.18 Capsicum annuum HOM05D005488 ORTHO05D006568 1.1e-50 203.4 136 74.3
CiPaw.14G016900 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.1e-50 203.4 137 78.1
Haze_02901 Corylus avellana HOM05D005488 ORTHO05D006568 1.1e-50 203.4 133 77.4
Aqoxy3G02564 Aquilegia oxysepala HOM05D005488 ORTHO05D006568 1.5e-50 203.0 136 75.7
CiPaw.13G022100 Carya illinoinensis HOM05D005488 ORTHO05D006568 1.9e-50 202.6 136 76.5
Manes.05G058400 Manihot esculenta HOM05D005488 ORTHO05D006568 9.6e-50 200.3 136 75.0
PGR042G2970 Punica granatum HOM05D005488 ORTHO05D006568 1.3e-49 199.9 137 75.9
GSVIVG01018352001 Vitis vinifera HOM05D005488 ORTHO05D006568 1.3e-49 199.9 136 74.3
Sc26g0001760 Simmondsia chinensis HOM05D005488 ORTHO05D006568 1.6e-49 199.5 137 75.9
Actinidia21613 Actinidia chinensis HOM05D005488 ORTHO05D006568 1.4e-48 196.4 139 71.9
Prupe.2G116500 Prunus persica HOM05D005488 ORTHO05D006568 3.1e-48 195.3 137 76.6
Potri.014G044300 Populus trichocarpa HOM05D005488 ORTHO05D006568 9.0e-48 193.7 139 72.7
Atru.chr5.75 Acer truncatum HOM05D005488 ORTHO05D006568 1.2e-47 193.4 137 71.5
Atru.chr5.44 Acer truncatum HOM05D005488 ORTHO05D006568 1.5e-47 193.0 137 70.8
Gohir.D08G161700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 2.6e-47 192.2 136 72.1
EL10Ac1g00715 Beta vulgaris HOM05D005488 ORTHO05D006568 3.4e-47 191.8 134 75.4
Gohir.A08G140700 Gossypium hirsutum HOM05D005488 ORTHO05D006568 3.4e-47 191.8 136 71.3
Hund17125 Selenicereus undatus HOM05D005488 ORTHO05D006568 4.5e-47 191.4 133 70.7
TWI23G0236 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 5.8e-47 191.0 137 74.5
DCAR_025027 Daucus carota HOM05D005488 ORTHO05D006568 1.3e-46 189.9 137 70.8
Thecc.01G402400 Theobroma cacao HOM05D005488 ORTHO05D006568 1.3e-46 189.9 136 70.6
MD07G1091300 Malus domestica HOM05D005488 ORTHO05D006568 1.7e-46 189.5 138 71.7
SGA_v2.0_scaffold52G19266 Striga asiatica HOM05D005488 ORTHO05D006568 1.7e-46 189.5 136 70.6
MSTRG.17108 Avicennia marina HOM05D005488 ORTHO05D006568 2.2e-46 189.1 137 70.1
COL.COLO4_12353 Corchorus olitorius HOM05D005488 ORTHO05D006568 2.2e-46 189.1 136 71.3
Medtr8g009280 Medicago truncatula HOM05D005488 ORTHO05D006568 2.9e-46 188.7 136 67.6
Peaxi162Scf00745g00015 Petunia axillaris HOM05D005488 ORTHO05D006568 2.9e-46 188.7 131 73.3
AUR62013788 Chenopodium quinoa HOM05D005488 ORTHO05D006568 3.8e-46 188.3 133 72.9
Lj3g0015162 Lotus japonicus HOM05D005488 ORTHO05D006568 4.9e-46 188.0 139 67.6
Eucgr.D01184 Eucalyptus grandis HOM05D005488 ORTHO05D006568 6.4e-46 187.6 136 69.9
Migut.N01716 Erythranthe guttata HOM05D005488 ORTHO05D006568 8.4e-46 187.2 136 69.9
TWI14G1396 Tripterygium wilfordii HOM05D005488 ORTHO05D006568 8.4e-46 187.2 137 72.3
RcHm_v2.0_Chr1g0344251 Rosa chinensis HOM05D005488 ORTHO05D006568 1.1e-45 186.8 137 69.3
Gorai.004G168100 Gossypium raimondii HOM05D005488 ORTHO05D006568 2.4e-45 185.7 137 70.8
FvH4_7g08830 Fragaria vesca HOM05D005488 ORTHO05D006568 4.2e-45 184.9 137 69.3
FAN06G3564 Fragaria x ananassa HOM05D005488 ORTHO05D006568 4.2e-45 184.9 137 69.3
AUR62023368 Chenopodium quinoa HOM05D005488 ORTHO05D006568 7.1e-45 184.1 133 71.4
FAN01G0908 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.1e-45 184.1 137 68.6
SalBow5G2779 Salvia bowleyana HOM05D005488 ORTHO05D006568 7.1e-45 184.1 136 68.4
Psat0s4427g0080 Pisum sativum HOM05D005488 ORTHO05D006568 1.6e-44 183.0 136 66.2
CANSAT25G0013 Cannabis sativa HOM05D005488 ORTHO05D006568 2.7e-44 182.2 138 68.1
Ciclev10022799m.g Citrus clementina HOM05D005488 ORTHO05D006568 2.7e-44 182.2 137 67.9
FAN10G0732 Fragaria x ananassa HOM05D005488 ORTHO05D006568 2.7e-44 182.2 137 68.6
MD02G1223400 Malus domestica HOM05D005488 ORTHO05D006568 2.7e-44 182.2 138 70.3
AL5G42420 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 3.5e-44 181.8 138 67.4
MELO3C006268.2 Cucumis melo HOM05D005488 ORTHO05D006568 3.5e-44 181.8 140 68.6
Glyma.03G103600 Glycine max HOM05D005488 ORTHO05D006568 3.5e-44 181.8 136 67.6
CSS0010758 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 6.0e-44 181.0 138 69.6
FAN10G4236 Fragaria x ananassa HOM05D005488 ORTHO05D006568 6.0e-44 181.0 137 68.6
Ca_23141_v3 Cicer arietinum L. HOM05D005488 ORTHO05D006568 7.9e-44 180.6 137 65.0
FAN03G1834 Fragaria x ananassa HOM05D005488 ORTHO05D006568 7.9e-44 180.6 137 68.6
CSS0012976 Camellia sinensis var. sinensis HOM05D005488 ORTHO05D006568 1.0e-43 180.3 140 68.6
Aa31LG1G26190 Aethionema arabicum HOM05D005488 ORTHO05D006568 1.3e-43 179.9 138 66.7
Phvul.010G041700 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.3e-43 179.9 136 66.9
AT3G60210 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 2.3e-43 179.1 139 67.6
Cc02_g25610 Coffea canephora HOM05D005488 ORTHO05D006568 2.3e-43 179.1 138 68.8
Duzib138G1174 Durio zibethinus HOM05D005488 ORTHO05D006568 3.9e-43 178.3 136 66.9
Carub.0005s2695 Capsella rubella HOM05D005488 ORTHO05D006568 2.5e-42 175.6 138 65.9
CsaV3_3G010440 Cucumis sativus L. HOM05D005488 ORTHO05D006568 3.3e-42 175.3 140 65.7
THA.LOC104827584 Tarenaya hassleriana HOM05D005488 ORTHO05D006568 5.6e-42 174.5 137 65.7
AL4G43700 Arabidopsis lyrata HOM05D005488 ORTHO05D006568 7.4e-42 174.1 139 64.7
Migut.B01488 Erythranthe guttata HOM05D005488 ORTHO05D006568 9.6e-42 173.7 137 67.2
ClCG06G000860 Citrullus lanatus HOM05D005488 ORTHO05D006568 1.6e-41 172.9 136 68.4
ClCG05G002900 Citrullus lanatus HOM05D005488 ORTHO05D006568 2.8e-41 172.2 140 67.9
ECA234G4156 Erigeron canadensis HOM05D005488 ORTHO05D006568 2.8e-41 172.2 140 67.1
Lalb_Chr19g0126481 Lupinus albus HOM05D005488 ORTHO05D006568 2.8e-41 172.2 114 77.2
HanXRQChr16g0522961 Helianthus annuus HOM05D005488 ORTHO05D006568 6.2e-41 171.0 141 63.8
Lsat_1_v5_gn_4_38520 Lactuca sativa HOM05D005488 ORTHO05D006568 6.2e-41 171.0 138 65.2
Sp4g26730 Schrenkiella parvula HOM05D005488 ORTHO05D006568 6.2e-41 171.0 139 62.6
ATR0665G403 Amborella trichopoda HOM05D005488 ORTHO05D006568 8.1e-41 170.6 123 74.0
Cpa.g.sc52.71 Carica papaya HOM05D005488 ORTHO05D006568 8.1e-41 170.6 127 73.2
unitig_26.g8858 Utricularia gibba HOM05D005488 ORTHO05D006568 1.1e-40 170.2 136 61.0
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 1.4e-40 169.9 140 65.0
Thhalv10001677m.g Eutrema salsugineum HOM05D005488 ORTHO05D006568 1.4e-40 169.9 140 63.6
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea HOM05D005488 ORTHO05D006568 1.8e-40 169.5 138 65.9
vmacro21078 Vaccinium macrocarpon HOM05D005488 ORTHO05D006568 1.8e-40 169.5 168 58.3
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 2.4e-40 169.1 140 63.6
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 2.4e-40 169.1 140 63.6
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 2.4e-40 169.1 140 63.6
Lalb_Chr03g0040501 Lupinus albus HOM05D005488 ORTHO05D006568 2.4e-40 169.1 116 74.1
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 4.0e-40 168.3 138 62.3
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea HOM05D005488 ORTHO05D006568 5.3e-40 167.9 138 65.2
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 9.0e-40 167.2 140 63.6
Sed0025787 Sechium edule HOM05D005488 ORTHO05D006568 9.0e-40 167.2 140 65.7
Carub.0004s2720 Capsella rubella HOM05D005488 ORTHO05D006568 1.5e-39 166.4 140 62.9
VMungo0331G0633 Vigna mungo HOM05D005488 ORTHO05D006568 2.6e-39 165.6 104 76.9
AT2G44650 Arabidopsis thaliana HOM05D005488 ORTHO05D006568 7.6e-39 164.1 140 63.6
BcaC02g07105 Brassica carinata HOM05D005488 ORTHO05D006568 7.6e-39 164.1 138 60.9
BraA04t18803Z Brassica rapa HOM05D005488 ORTHO05D006568 9.9e-39 163.7 138 60.9
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 1.7e-38 162.9 138 60.9
CDE12G0168 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 1.7e-38 162.9 143 62.9
CDE04G3246 Ceratophyllum demersum HOM05D005488 ORTHO05D006568 4.9e-38 161.4 137 64.2
Sed0000336 Sechium edule HOM05D005488 ORTHO05D006568 8.4e-38 160.6 136 65.4
MELO3C022455.2 Cucumis melo HOM05D005488 ORTHO05D006568 1.1e-37 160.2 155 60.0
CARHR139860 Cardamine hirsuta HOM05D005488 ORTHO05D006568 1.9e-37 159.5 139 60.4
Os10g0566700 Oryza sativa ssp. japonica HOM05D005488 ORTHO05D006568 1.9e-37 159.5 105 76.2
TPR.G17350 Trifolium pratense HOM05D005488 ORTHO05D006568 3.2e-37 158.7 107 69.2
Zm00001eb390720 Zea mays HOM05D005488 ORTHO05D006568 9.3e-37 157.1 102 77.5
CsaV3_6G006710 Cucumis sativus L. HOM05D005488 ORTHO05D001261 1.2e-36 156.8 127 66.1
Zm00001eb024030 Zea mays HOM05D005488 ORTHO05D006568 2.1e-36 156.0 121 68.6
BcaB06g29391 Brassica carinata HOM05D005488 ORTHO05D006568 2.7e-36 155.6 129 60.5
Rhsim01G0143400 Rhododendron simsii HOM05D005488 ORTHO05D006568 2.7e-36 155.6 124 66.1
Dinv44023 Davidia involucrata HOM05D005488 ORTHO05D006568 6.0e-36 154.5 90 86.7
Potri.002G135700 Populus trichocarpa HOM05D005488 ORTHO05D006568 1.8e-35 152.9 100 76.0
unitig_750.g28406 Utricularia gibba HOM05D005488 ORTHO05D006568 1.8e-35 152.9 138 58.7
Sabra02G0105500 Salix brachista HOM05D005488 ORTHO05D006568 4.8e-33 144.8 204 45.6
A04p33420 Brassica napus HOM05D005488 ORTHO05D006568 6.2e-33 144.4 138 55.1
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 3.1e-32 142.1 106 64.2
C04p71170 Brassica napus HOM05D005488 ORTHO05D006568 5.3e-32 141.4 144 55.6
SEGI_24977 Sequoiadendron giganteum HOM05D005488 ORTHO05D006568 2.6e-31 139.0 142 54.2
HPP92_025708 Vanilla planifolia HOM05D005488 ORTHO05D006568 4.9e-30 134.8 91 71.4
Dinv43589 Davidia involucrata HOM05D005488 ORTHO05D006568 1.4e-29 133.3 88 75.0
Zm00001eb071630 Zea mays HOM05D005488 ORTHO05D006568 2.7e-28 129.0 74 89.2
QL04p026246 Quercus lobata HOM05D005488 ORTHO05D006568 3.5e-28 128.6 70 88.6
Mapoly0181s0002 Marchantia polymorpha HOM05D005488 ORTHO05D006568 1.3e-27 126.7 92 67.4
Sabra14G0032200 Salix brachista HOM05D005488 ORTHO05D006568 3.9e-27 125.2 144 51.4
SMO244G0054 Selaginella moellendorffii HOM05D005488 ORTHO05D006568 3.9e-27 125.2 89 65.2
Pp3c2_19170 Physcomitrium patens HOM05D005488 ORTHO05D006568 5.1e-27 124.8 111 56.8
Duzib133G1397 Durio zibethinus HOM05D005488 ORTHO05D006568 9.7e-26 120.6 108 63.0
Pp3c1_20880 Physcomitrium patens HOM05D005488 ORTHO05D006568 2.0e-23 112.8 92 55.4
Gohir.D07G176200 Gossypium hirsutum HOM05D005488 ORTHO05D006568 1.7e-22 109.8 74 74.3
Glyma.07G120400 Glycine max HOM05D005488 ORTHO05D006568 2.7e-20 102.4 87 59.8
MD13G1240800 Malus domestica HOM05D005488 ORTHO05D006568 4.6e-20 101.7 108 54.6
Gorai.007G266500 Gossypium raimondii HOM05D005488 ORTHO05D006568 1.7e-17 93.2 65 70.8
Phvul.006G055900 Phaseolus vulgaris HOM05D005488 ORTHO05D006568 1.8e-16 89.7 87 56.3
QL04p026254 Quercus lobata HOM05D005488 ORTHO05D006568 1.1e-10 70.5 69 53.6
Rhsim03G0098500 Rhododendron simsii HOM05D005488 ORTHO05D006568 1.7e-09 66.6 42 78.6
MD00G1150500 Malus domestica HOM05D005488 ORTHO05D006568 3.7e-09 65.5 37 86.5
AagrBONN_evm.TU.Sc2ySwM_362.1594 Anthoceros agrestis HOM05D002686 ORTHO05D003222 5.0e-06 55.1 95 38.9


User provided reference genes

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