Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 3.4e-141 505.0 254 100.0
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.3e-100 370.2 217 88.5
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 4.8e-79 298.5 200 73.5
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 5.3e-78 295.0 195 73.3
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 5.3e-78 295.0 200 72.0
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.2e-77 293.9 201 71.6
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.2e-77 293.9 196 71.9
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 2.7e-77 292.7 200 71.5
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.5e-77 292.4 194 72.7
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 3.5e-77 292.4 197 70.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.3e-76 290.4 205 70.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.3e-76 290.4 200 69.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.7e-76 290.0 196 71.9
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 2.2e-76 289.7 191 73.8
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.2e-76 289.7 191 73.8
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.2e-76 289.7 196 71.9
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.9e-76 289.3 205 70.2
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 5.0e-76 288.5 206 67.5
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 9.4e-75 284.3 200 70.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 2.1e-74 283.1 191 72.3
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 3.6e-74 282.3 190 72.1
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 8.0e-74 281.2 195 69.7
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.0e-73 280.8 196 71.4
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.4e-73 280.4 196 70.4
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.4e-73 280.4 196 69.4
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.3e-73 279.6 195 68.7
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.0e-73 279.3 198 67.7
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 5.2e-73 278.5 196 70.4
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 8.8e-73 277.7 200 69.5
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 1.2e-72 277.3 205 66.3
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.2e-72 277.3 196 69.9
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.5e-72 276.9 194 70.1
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 2.6e-72 276.2 196 67.3
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 3.4e-72 275.8 194 70.1
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 5.7e-72 275.0 195 65.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 5.7e-72 275.0 196 66.3
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 9.8e-72 274.2 190 71.6
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 9.8e-72 274.2 206 64.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 1.3e-71 273.9 195 66.2
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 1.3e-71 273.9 209 64.1
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.7e-71 273.5 195 65.1
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.8e-71 272.7 193 67.9
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 2.8e-71 272.7 195 64.1
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 4.8e-71 271.9 193 67.4
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 3.1e-70 269.2 200 63.5
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 5.4e-70 268.5 197 62.9
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 7.0e-70 268.1 200 64.5
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 7.0e-70 268.1 200 64.5
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 1.2e-69 267.3 197 67.0
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.6e-69 266.9 198 65.2
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.5e-69 265.8 189 65.6
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 4.5e-69 265.4 197 64.5
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 4.5e-69 265.4 192 66.1
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 4.5e-69 265.4 193 66.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 5.9e-69 265.0 192 66.1
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 5.9e-69 265.0 198 62.6
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 7.7e-69 264.6 193 64.8
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 1.0e-68 264.2 189 66.7
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 1.3e-68 263.8 196 65.3
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 1.3e-68 263.8 189 65.1
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.3e-68 263.8 189 66.1
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 2.9e-68 262.7 198 63.1
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.9e-67 260.0 197 65.5
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 2.5e-67 259.6 197 65.0
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.2e-67 258.8 189 66.7
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 7.2e-67 258.1 200 59.5
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.6e-66 256.9 210 61.9
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 1.6e-66 256.9 238 58.0
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 2.7e-66 256.1 189 66.1
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 8.0e-66 254.6 201 63.7
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.0e-65 254.2 208 63.9
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 6.8e-65 251.5 204 59.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 5.7e-64 248.4 221 60.6
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.2e-61 240.7 195 62.6
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 1.9e-59 233.4 196 61.2
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.5e-59 233.0 196 61.2
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 6.1e-58 228.4 151 72.8
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.0e-57 227.6 202 58.4
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 3.2e-54 216.1 231 52.8
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 5.4e-54 215.3 196 58.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 2.7e-53 213.0 146 67.8
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 7.8e-53 211.5 150 68.7
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 3.3e-51 206.1 291 43.3
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 5.6e-51 205.3 149 63.8
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 5.6e-51 205.3 150 68.0
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 8.9e-49 198.0 197 53.8
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 8.9e-49 198.0 191 48.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 3.4e-48 196.1 205 44.4
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.3e-47 194.1 198 47.0
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 2.4e-38 163.3 193 45.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 9.5e-35 151.4 97 71.1
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 4.6e-29 132.5 196 38.8
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 8.6e-28 128.3 89 67.4
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 1.5e-27 127.5 164 42.1
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.2e-26 124.4 108 57.4
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 2.1e-26 123.6 93 62.4
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 8.1e-26 121.7 89 68.5
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 5.4e-22 109.0 196 33.7
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 4.6e-21 105.9 110 52.7
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 6.2e-18 95.5 90 56.7
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 4.0e-17 92.8 63 66.7
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.2e-16 91.3 133 44.4
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 2.6e-16 90.1 117 37.6
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 5.4e-14 82.4 91 45.1


User provided reference genes

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