Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.1e-60 236.5 119 100.0
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 3.3e-46 188.3 98 94.9
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 4.8e-29 131.3 100 64.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 1.2e-27 126.7 98 66.3
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.5e-27 126.3 108 63.9
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 4.5e-27 124.8 99 66.7
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 4.5e-27 124.8 108 63.9
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.5e-27 124.8 100 66.0
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 5.8e-27 124.4 108 63.9
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 5.8e-27 124.4 102 68.6
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.7e-26 122.9 100 65.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.7e-26 122.9 114 57.0
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.7e-26 122.9 100 64.0
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 2.9e-26 122.1 101 65.3
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.0e-26 121.3 72 77.8
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 6.5e-26 120.9 97 64.9
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 8.4e-26 120.6 98 66.3
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 8.4e-26 120.6 99 61.6
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.9e-25 119.4 91 65.9
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.9e-25 119.4 68 80.9
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.9e-25 119.4 97 63.9
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.2e-25 118.6 98 59.2
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 4.2e-25 118.2 62 87.1
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 4.2e-25 118.2 79 74.7
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 5.5e-25 117.9 82 67.1
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 5.5e-25 117.9 70 77.1
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 5.5e-25 117.9 86 70.9
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 7.2e-25 117.5 77 71.4
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 7.2e-25 117.5 85 70.6
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 7.2e-25 117.5 76 75.0
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 7.2e-25 117.5 72 72.2
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 9.3e-25 117.1 77 66.2
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 9.3e-25 117.1 63 82.5
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.6e-24 116.3 77 70.1
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.6e-24 116.3 62 83.9
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 2.1e-24 115.9 98 60.2
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 2.1e-24 115.9 89 67.4
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 2.1e-24 115.9 68 79.4
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 2.1e-24 115.9 77 70.1
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 2.1e-24 115.9 88 67.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.1e-24 115.9 62 83.9
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.7e-24 115.5 101 62.4
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 2.7e-24 115.5 68 79.4
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 2.7e-24 115.5 68 79.4
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.7e-24 115.5 64 84.4
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 6.1e-24 114.4 72 72.2
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.1e-24 114.4 99 60.6
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.1e-24 114.4 99 60.6
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 6.1e-24 114.4 66 78.8
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 6.1e-24 114.4 101 58.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 6.1e-24 114.4 138 50.7
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 6.1e-24 114.4 70 72.9
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 7.9e-24 114.0 58 87.9
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 7.9e-24 114.0 62 83.9
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 7.9e-24 114.0 98 60.2
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 7.9e-24 114.0 62 82.3
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 7.9e-24 114.0 94 62.8
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 1.0e-23 113.6 110 56.4
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.0e-23 113.6 64 82.8
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.0e-23 113.6 92 63.0
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.3e-23 113.2 99 58.6
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.3e-23 113.2 99 60.6
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 1.8e-23 112.8 100 61.0
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.8e-23 112.8 92 63.0
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.3e-23 112.5 99 60.6
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.0e-23 112.1 89 62.9
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 3.0e-23 112.1 99 57.6
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 3.9e-23 111.7 82 65.9
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 3.9e-23 111.7 67 77.6
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 6.7e-23 110.9 81 65.4
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 6.7e-23 110.9 79 68.4
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 6.7e-23 110.9 67 77.6
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 6.7e-23 110.9 69 76.8
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 8.7e-23 110.5 99 57.6
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 2.5e-22 109.0 98 60.2
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 2.5e-22 109.0 84 60.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 3.3e-22 108.6 84 63.1
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 3.3e-22 108.6 67 77.6
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 5.7e-22 107.8 77 68.8
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 9.7e-22 107.1 105 56.2
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.3e-21 106.7 65 76.9
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 1.6e-21 106.3 99 58.6
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.6e-21 106.3 57 80.7
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 2.8e-21 105.5 99 56.6
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 2.8e-21 105.5 98 57.1
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 4.8e-21 104.8 55 81.8
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 6.3e-21 104.4 75 70.7
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 6.3e-21 104.4 101 53.5
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 8.2e-21 104.0 64 75.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 8.2e-21 104.0 64 75.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 8.2e-21 104.0 64 75.0
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 8.2e-21 104.0 102 55.9
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.1e-20 103.6 56 82.1
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.4e-20 103.2 102 55.9
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.4e-20 103.2 91 56.0
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 1.8e-20 102.8 102 55.9
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 9.0e-20 100.5 73 67.1
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 5.9e-19 97.8 66 68.2
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.7e-19 97.4 103 51.5
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 3.8e-18 95.1 78 59.0
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.4e-17 93.2 71 62.0
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 5.5e-17 91.3 100 52.0
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 3.0e-15 85.5 76 57.9
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 6.3e-13 77.8 43 81.4
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 1.2e-11 73.6 89 48.3
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 3.8e-10 68.6 93 48.4
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 1.9e-09 66.2 75 58.7
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.7e-08 62.4 74 44.6
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 5.1e-07 58.2 38 76.3
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 6.7e-07 57.8 74 48.6


User provided reference genes

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