Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 0.0e+00 2352.8 1217 100.0
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 0.0e+00 2214.5 1209 95.0
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 0.0e+00 1420.2 1212 63.9
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 0.0e+00 1273.5 1218 58.4
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 0.0e+00 1271.5 1214 58.2
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 0.0e+00 1211.1 1210 55.9
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 0.0e+00 1181.8 1216 54.3
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 0.0e+00 1171.4 1214 54.4
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 0.0e+00 1168.7 1211 54.8
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1153.7 1218 53.5
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 0.0e+00 1151.7 1210 53.5
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 0.0e+00 1150.6 1218 53.1
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 0.0e+00 1149.8 1217 52.8
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 0.0e+00 1149.4 1220 53.4
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 0.0e+00 1148.7 1203 53.6
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 0.0e+00 1139.4 1217 53.0
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 0.0e+00 1137.9 1215 52.8
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 0.0e+00 1132.9 1222 53.8
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 0.0e+00 1132.9 1231 53.1
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1127.1 1220 52.9
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 0.0e+00 1119.0 1166 53.9
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 0.0e+00 1114.8 1220 52.2
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 0.0e+00 1105.1 1210 52.0
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 0.0e+00 1098.2 1218 51.6
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 0.0e+00 1097.8 1159 54.4
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 0.0e+00 1096.6 1217 51.3
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 0.0e+00 1078.2 1148 53.6
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 3.5e-308 1062.0 1215 49.3
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 1.9e-306 1056.2 1144 52.8
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 3.6e-305 1052.0 1201 51.0
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 4.4e-303 1045.0 1210 49.8
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 1.2e-300 1036.9 1213 49.6
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 4.5e-300 1035.0 1221 48.8
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 2.5e-298 1029.2 1209 48.3
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 4.0e-296 1021.9 1204 48.5
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-295 1020.4 1206 49.2
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 8.3e-294 1014.2 1212 49.1
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 7.7e-292 1007.7 1206 49.3
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 2.2e-291 1006.1 1229 49.1
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 8.5e-291 1004.2 1209 48.7
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.2e-290 1001.1 1207 48.9
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 3.6e-289 998.8 1204 47.8
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 6.8e-288 994.6 1207 47.6
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 3.7e-286 988.8 1211 47.8
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 2.0e-284 983.0 1175 48.2
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 4.5e-284 981.9 1154 50.4
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 1.0e-283 980.7 1170 49.4
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 1.0e-280 970.7 1108 50.5
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 5.2e-280 968.4 1351 44.6
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 3.7e-278 962.2 1224 47.0
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 3.7e-278 962.2 1108 50.2
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 3.2e-277 959.1 1108 50.4
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 4.6e-276 955.3 1207 46.4
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 1.3e-275 953.7 1206 46.4
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 3.9e-275 952.2 1104 48.8
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 1.1e-274 950.7 1208 45.9
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 1.1e-274 950.7 1208 45.9
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 1.5e-274 950.3 1204 47.0
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 7.3e-274 948.0 1201 46.7
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 1.8e-272 943.3 1208 46.1
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 1.8e-272 943.3 1346 43.9
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 4.0e-272 942.2 1207 46.4
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 1.9e-269 933.3 1198 45.8
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 4.6e-268 928.7 1349 44.0
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 9.5e-266 921.0 1202 45.3
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 1.2e-263 914.1 870 58.7
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 9.9e-263 911.0 1106 48.7
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 6.6e-259 898.3 1111 48.7
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 1.5e-255 887.1 1050 47.8
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.5e-250 870.5 1112 47.7
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 4.0e-248 862.4 1217 43.6
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 2.0e-247 860.1 870 56.9
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 1.8e-240 837.0 1238 43.9
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 2.1e-236 823.5 1158 44.6
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 7.1e-229 798.5 1189 42.0
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 3.4e-223 779.6 854 51.3
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.6e-220 770.8 922 50.7
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 1.3e-209 734.6 1254 39.4
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 2.0e-207 727.2 934 46.5
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 1.1e-205 721.5 852 48.9
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.2e-198 697.2 1010 43.0
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 3.5e-191 673.3 990 41.7
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 2.3e-179 634.0 1145 37.7
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 9.5e-173 612.1 677 50.8
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 1.3e-169 601.7 950 40.2
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 5.8e-162 576.2 584 54.3
Atru.chr9.2610 Acer truncatum HOM05D000087 ORTHO05D005735 1.3e-161 575.1 510 61.8
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 4.6e-159 566.6 686 48.0
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 8.0e-156 555.8 760 43.3
VMungo1127G0184 Vigna mungo HOM05D000087 ORTHO05D005735 1.7e-145 521.5 583 51.1
MD14G1143100 Malus domestica HOM05D000087 ORTHO05D005735 7.3e-141 506.1 599 50.1
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 6.6e-134 483.0 606 46.9
CARHR143600 Cardamine hirsuta HOM05D000087 ORTHO05D005735 8.7e-134 482.6 500 53.6
Os08g0152900 Oryza sativa ssp. japonica HOM05D000087 ORTHO05D005735 1.2e-127 462.2 594 45.6
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 9.0e-123 446.0 591 43.7
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 2.1e-111 408.3 532 44.7
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 1.8e-110 405.2 1199 30.6
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 9.0e-99 366.3 503 43.5
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 1.9e-96 358.6 1028 30.2
SEGI_15816 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 3.0e-86 324.7 373 50.4
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.0e-73 283.1 411 44.0
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 1.7e-68 265.8 256 55.1
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 2.2e-65 255.4 426 39.4
MCO07G377 Micromonas commoda HOM05D000087 ORTHO05D005735 2.3e-62 245.4 950 25.5
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 2.5e-56 225.3 208 53.8
Duzib084G0823 Durio zibethinus HOM05D000087 ORTHO05D005735 6.3e-52 210.7 179 63.1
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.4e-51 209.5 170 61.8
Cpa.g.sc363.3 Carica papaya HOM05D000087 ORTHO05D005735 2.3e-49 202.2 174 63.8
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.9e-48 199.1 252 45.2
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 1.2e-47 196.4 349 37.0
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 6.4e-44 184.1 1144 23.1
CSS0034403 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.4e-43 183.0 232 48.7
CSS0007327 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.2e-42 179.9 242 47.1
HPP92_028197 Vanilla planifolia HOM05D000087 ORTHO05D005735 5.0e-41 174.5 176 55.1
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-37 163.3 575 29.0
MD14G1142800 Malus domestica HOM05D000087 ORTHO05D005735 3.5e-34 151.8 242 37.2
FAN13G3301 Fragaria x ananassa HOM05D000087 ORTHO05D005735 1.1e-32 146.7 142 57.7
CiPaw.11G106300 Carya illinoinensis HOM05D000087 ORTHO05D005735 4.3e-32 144.8 251 35.9
CARHR293880 Cardamine hirsuta HOM05D000087 ORTHO05D005735 9.5e-32 143.7 123 57.7
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 3.4e-29 135.2 332 30.4
Oeu053260.1 Olea europaea HOM05D000087 ORTHO05D010194 7.8e-26 124.0 108 62.0
CARHR293870 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.1e-22 113.6 102 58.8
MBI04_g04804_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 4.9e-20 104.8 99 54.5
CARHR291390 Cardamine hirsuta HOM05D000087 ORTHO05D005735 6.4e-20 104.4 71 67.6
CSS0050207 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 3.2e-19 102.1 98 58.2
Hma1.2p1_0198F.1_g085360 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 3.2e-19 102.1 98 55.1
RcHm_v2.0_Chr7g0188121 Rosa chinensis HOM05D000087 ORTHO05D005735 4.2e-19 101.7 71 71.8
SEGI_26704 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 7.1e-19 100.9 177 36.2
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.7e-17 96.3 123 48.8
VMungo1127G1440 Vigna mungo HOM05D000087 ORTHO05D005735 3.0e-17 95.5 114 48.2
MBI17_g33112_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 5.1e-17 94.7 78 61.5
Rhsim02G0255800 Rhododendron simsii HOM05D000087 ORTHO05D005735 1.1e-16 93.6 100 52.0
MBI04_g07085_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 4.0e-14 85.1 82 52.4
MBI04_g39794_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 9.0e-14 84.0 81 53.1
Medtr3g080660 Medicago truncatula HOM05D000087 ORTHO05D005735 9.3e-11 73.9 103 47.6
Duzib084G0615 Durio zibethinus HOM05D000087 ORTHO05D005735 1.2e-10 73.6 94 43.6
CARHR046160 Cardamine hirsuta HOM05D000087 ORTHO05D005735 6.0e-10 71.2 61 59.0
VMungo0145G0001 Vigna mungo HOM05D000087 ORTHO05D005735 1.0e-09 70.5 97 39.2
MBI04_g04802_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.3e-09 70.1 65 61.5
VMungo1080G1218 Vigna mungo HOM05D000087 ORTHO05D005735 1.7e-09 69.7 97 38.1
CSS0033050 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 5.1e-09 68.2 73 49.3
MBI04_g04803_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 5.1e-09 68.2 68 57.4
CARHR291380 Cardamine hirsuta HOM05D000087 ORTHO05D005735 8.1e-07 60.8 65 46.2


User provided reference genes

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