Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 4.7e-101 371.3 203 100.0
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 4.4e-99 364.8 203 98.5
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 2.8e-37 159.5 207 49.3
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.4e-36 157.1 209 51.7
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.7e-34 150.2 210 50.5
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 8.4e-34 147.9 213 46.5
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 5.1e-31 138.7 214 44.4
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.1e-30 137.5 214 43.9
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.5e-30 137.1 217 46.5
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.9e-30 136.7 211 44.1
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 4.3e-30 135.6 212 46.7
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 1.3e-29 134.0 215 48.8
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 1.6e-29 133.7 215 44.7
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 8.2e-29 131.3 208 44.2
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.8e-28 130.2 217 42.9
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.8e-28 130.2 217 42.9
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 3.1e-28 129.4 214 48.1
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 3.1e-28 129.4 210 43.8
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 5.3e-28 128.6 217 48.4
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 6.9e-28 128.3 216 42.6
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.2e-27 127.5 209 48.3
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.6e-27 126.3 214 48.6
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 2.6e-27 126.3 209 44.5
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 7.6e-27 124.8 216 46.3
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.9e-26 122.9 213 49.8
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 2.9e-26 122.9 215 40.9
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 5.0e-26 122.1 211 42.2
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 8.4e-26 121.3 214 42.5
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 1.4e-25 120.6 203 44.3
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 1.4e-25 120.6 208 41.8
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.5e-25 119.8 223 46.6
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 4.2e-25 119.0 225 42.2
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 5.5e-25 118.6 207 48.3
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 9.3e-25 117.9 215 49.3
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.1e-24 116.7 210 47.1
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.1e-24 116.7 214 50.0
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 3.5e-24 115.9 206 46.1
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 4.6e-24 115.5 212 40.1
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.6e-24 115.5 221 48.0
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 6.1e-24 115.2 207 46.9
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 1.0e-23 114.4 204 41.7
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.0e-23 114.4 213 42.7
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 1.0e-23 114.4 217 43.8
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 2.3e-23 113.2 168 45.2
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-23 113.2 205 40.5
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 3.0e-23 112.8 209 50.2
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 1.1e-22 110.9 176 50.0
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.1e-22 110.9 225 40.4
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 1.5e-22 110.5 213 45.5
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.5e-22 110.5 208 39.4
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.3e-22 109.4 214 41.1
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 3.3e-22 109.4 217 41.5
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 4.3e-22 109.0 215 47.4
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.6e-21 107.1 210 39.0
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.6e-21 107.1 208 38.9
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.6e-21 107.1 204 43.1
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.2e-21 106.7 209 38.3
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 2.8e-21 106.3 207 42.0
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 2.8e-21 106.3 206 41.7
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.7e-21 105.9 225 46.2
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.3e-21 105.1 214 46.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 6.3e-21 105.1 215 41.9
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 1.4e-20 104.0 171 40.4
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.8e-20 103.6 170 43.5
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 1.8e-20 103.6 234 36.8
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 2.4e-20 103.2 205 41.0
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 2.4e-20 103.2 214 46.3
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.4e-20 103.2 225 44.0
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.1e-20 102.4 214 46.3
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.2e-19 100.9 168 44.0
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.2e-19 100.9 209 41.1
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-19 100.9 214 45.8
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.5e-19 100.5 211 43.6
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.5e-19 100.5 221 36.2
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.0e-19 100.1 205 39.5
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 5.9e-19 98.6 210 39.0
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 5.9e-19 98.6 210 39.0
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 5.9e-19 98.6 213 44.6
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 5.9e-19 98.6 210 44.8
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.0e-18 97.8 210 39.0
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.3e-18 97.4 213 39.9
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 1.3e-18 97.4 214 42.5
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.3e-18 97.4 210 44.3
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 2.9e-18 96.3 154 43.5
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.9e-18 96.3 216 40.7
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.9e-18 96.3 219 43.4
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 3.8e-18 95.9 210 38.6
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 3.8e-18 95.9 211 41.2
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 5.0e-18 95.5 213 37.6
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 5.0e-18 95.5 205 46.8
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 8.5e-18 94.7 205 39.0
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 8.5e-18 94.7 187 48.1
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.1e-17 94.4 206 42.7
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 2.5e-17 93.2 171 40.9
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 3.2e-17 92.8 211 37.0
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.2e-17 92.8 211 36.5
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 3.2e-17 92.8 217 36.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 3.2e-17 92.8 217 39.2
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 7.2e-17 91.7 211 42.2
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 1.2e-16 90.9 217 39.2
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-16 90.5 211 36.0
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.6e-16 90.5 211 36.0
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.6e-16 90.5 216 36.1
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 2.1e-16 90.1 208 35.1
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 3.6e-16 89.4 172 41.3
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 3.6e-16 89.4 210 39.5
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 4.6e-16 89.0 210 39.5
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 6.1e-16 88.6 210 39.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 7.9e-16 88.2 172 39.5
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 7.9e-16 88.2 210 39.5
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.0e-15 87.8 213 39.0
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.0e-15 87.8 125 47.2
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.0e-15 87.8 220 42.7
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.4e-15 87.4 204 40.7
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.4e-15 87.4 213 39.9
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.8e-15 87.0 207 39.1
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-15 87.0 211 35.5
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 1.8e-15 87.0 211 35.5
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 1.8e-15 87.0 218 39.0
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 3.0e-15 86.3 213 39.4
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 3.0e-15 86.3 204 32.8
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.1e-15 85.5 178 38.8
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 5.1e-15 85.5 227 38.8
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 6.7e-15 85.1 165 33.3
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 6.7e-15 85.1 196 37.2
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.1e-14 84.3 173 44.5
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.5e-14 84.0 165 38.8
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 2.0e-14 83.6 160 48.1
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 2.0e-14 83.6 209 43.1
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.3e-14 82.4 200 42.5
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 4.3e-14 82.4 206 35.9
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 2.2e-13 80.1 174 38.5
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 3.7e-13 79.3 205 34.1
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 6.3e-13 78.6 148 40.5
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.1e-12 77.8 209 41.6
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.4e-12 77.4 154 39.6
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 4.1e-12 75.9 205 39.5
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 9.1e-12 74.7 206 35.4
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 1.2e-11 74.3 210 37.6
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.0e-11 73.6 144 41.7
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 2.0e-11 73.6 165 35.2
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 3.4e-11 72.8 148 39.9
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 5.9e-11 72.0 209 32.1
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 2.2e-10 70.1 208 37.0
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.8e-10 69.3 150 36.7
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 5.0e-10 68.9 75 52.0
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 2.5e-09 66.6 181 37.6
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 5.5e-09 65.5 213 31.0
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 5.5e-09 65.5 171 38.0
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 7.2e-09 65.1 191 35.1
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 7.2e-09 65.1 205 32.7
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 7.2e-09 65.1 113 41.6
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 9.4e-09 64.7 118 41.5
Zm00001eb343410 Zea mays HOM05D003644 ORTHO05D004305 1.2e-08 64.3 183 32.8
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 1.6e-08 63.9 164 36.0
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.7e-08 63.2 187 33.2
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 3.6e-08 62.8 188 31.9
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 3.6e-08 62.8 127 49.6
Nitab4.5_0001004g0030 Nicotiana tabacum HOM05D003644 ORTHO05D004305 3.6e-08 62.8 131 39.7
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 4.7e-08 62.4 169 35.5
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 7.9e-08 61.6 189 35.4
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 7.9e-08 61.6 93 41.9
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 1.0e-07 61.2 78 50.0
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.4e-07 60.8 183 35.5
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.4e-07 60.8 183 35.5
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 2.3e-07 60.1 203 31.5
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 2.3e-07 60.1 205 33.7
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.1e-07 58.9 160 28.8


User provided reference genes

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