Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 2.8e-212 741.9 433 100.0
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 3.8e-185 651.7 421 92.6
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 6.8e-174 614.4 429 88.3
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 7.3e-43 179.1 498 38.2
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 8.1e-34 149.1 482 31.7
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 4.4e-32 143.3 472 36.2
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 9.9e-32 142.1 468 34.0
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 9.9e-32 142.1 447 34.7
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 1.3e-31 141.7 459 32.2
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 2.2e-31 141.0 460 32.4
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 6.4e-31 139.4 468 33.8
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 2.4e-30 137.5 473 32.1
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 4.1e-30 136.7 499 32.1
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 5.4e-30 136.3 499 31.7
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 2.7e-29 134.0 474 34.0
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 4.6e-29 133.3 451 36.4
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 7.8e-29 132.5 489 32.3
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.3e-28 131.7 494 31.8
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.3e-28 131.7 475 34.3
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 1.9e-27 127.9 449 34.7
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.5e-27 127.5 458 33.6
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 4.3e-27 126.7 500 33.2
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 2.8e-26 124.0 477 34.4
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 1.4e-25 121.7 474 32.5
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.8e-25 121.3 456 33.8
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 2.4e-25 120.9 462 34.2
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.0e-25 120.2 456 34.4
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 5.2e-25 119.8 457 30.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.2e-24 118.6 461 33.6
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 3.4e-24 117.1 422 37.2
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 2.9e-23 114.0 471 32.9
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 3.2e-22 110.5 389 37.3
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 1.2e-21 108.6 435 32.9
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 1.2e-21 108.6 446 31.2
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 2.7e-21 107.5 461 35.1
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.3e-20 104.4 413 35.4
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.1e-19 102.1 410 34.6
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 2.5e-19 100.9 428 31.8
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 3.3e-19 100.5 464 29.3
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 4.3e-19 100.1 502 31.1
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 5.6e-19 99.8 445 31.7
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 2.1e-18 97.8 448 34.4
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 2.8e-18 97.4 449 34.3
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.1e-17 95.5 445 29.9
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 3.1e-17 94.0 462 30.5
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 5.3e-17 93.2 465 30.5
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 3.4e-16 90.5 442 32.8
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 9.9e-16 89.0 418 26.8
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 2.2e-15 87.8 329 32.2
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 2.9e-15 87.4 452 30.1
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 6.4e-15 86.3 434 32.9
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 3.2e-14 84.0 472 31.8
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 5.4e-14 83.2 365 28.8
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 5.4e-14 83.2 445 29.9
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 2.1e-13 81.3 368 32.1
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 3.5e-13 80.5 228 30.3
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 3.5e-13 80.5 439 31.2
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 6.0e-13 79.7 479 29.4
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 1.3e-12 78.6 204 32.8
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 2.3e-12 77.8 481 29.7
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 3.0e-12 77.4 362 27.9
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 3.9e-12 77.0 449 30.1
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 5.1e-12 76.6 441 29.0
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 5.1e-12 76.6 435 29.9
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 6.6e-12 76.3 482 29.7
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 6.6e-12 76.3 480 29.6
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 8.7e-12 75.9 331 31.7
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 8.7e-12 75.9 377 30.0
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.5e-11 75.1 459 26.8
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 1.5e-11 75.1 460 31.7
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.3e-11 73.6 85 49.4
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.3e-11 73.6 85 49.4
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 7.3e-11 72.8 351 34.2
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 9.6e-11 72.4 439 29.2
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 1.6e-10 71.6 439 29.2
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 2.8e-10 70.9 384 26.6
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 2.8e-10 70.9 384 26.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 3.6e-10 70.5 462 31.6
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 6.2e-10 69.7 443 29.3
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 8.1e-10 69.3 406 28.1
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 1.1e-09 68.9 476 29.4
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 1.8e-09 68.2 461 27.1
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.8e-09 68.2 402 27.4
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 2.4e-09 67.8 452 28.3
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 3.1e-09 67.4 473 30.2
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 3.1e-09 67.4 445 28.5
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 5.3e-09 66.6 496 27.2
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 5.3e-09 66.6 471 32.3
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 1.2e-08 65.5 390 25.1
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 7.6e-08 62.8 465 29.7
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 2.9e-07 60.8 458 25.8
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 4.9e-07 60.1 344 28.8
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 8.4e-07 59.3 487 29.8
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.1e-06 58.9 60 48.3
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 2.4e-06 57.8 487 29.8
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 5.5e-06 56.6 437 27.7
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 5.5e-06 56.6 458 27.9
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 7.1e-06 56.2 482 27.6


User provided reference genes

Program Settings