Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1931 Papaver somniferum HOM05D000036 ORTHO05D036859 2.2e-106 389.0 202 100.0
PSO170G1583 Papaver somniferum HOM05D000036 ORTHO05D000095 1.6e-88 329.7 201 87.6
Nn7g37817 Nelumbo nucifera HOM05D000036 ORTHO05D036859 1.3e-15 87.4 190 35.8
Dinv44138 Davidia involucrata HOM05D000036 ORTHO05D001461 6.7e-15 85.1 182 35.7
TAR375G0532 Trochodendron aralioides HOM05D000036 ORTHO05D000095 7.4e-14 81.6 158 37.3
Hma1.2p1_3629F.1_g337110 Hydrangea macrophylla HOM05D000036 ORTHO05D000095 9.6e-14 81.3 175 37.1
GSVIVG01027653001 Vitis vinifera HOM05D000036 ORTHO05D000095 2.1e-13 80.1 94 50.0
Cpa.g.sc145.14 Carica papaya HOM05D000036 ORTHO05D000095 2.8e-13 79.7 135 39.3
Aqoxy7G00709 Aquilegia oxysepala HOM05D001474 ORTHO05D001461 2.4e-12 76.6 175 36.0
MBI12_g24113_MAGBIO Magnolia biondii HOM05D002462 ORTHO05D002893 4.1e-12 75.9 86 52.3
Rhsim07G0029800 Rhododendron simsii HOM05D000036 ORTHO05D000095 5.3e-12 75.5 95 50.5
arahy.Tifrunner.gnm1.ann1.8PHP50 Arachis hypogaea HOM05D000036 ORTHO05D000095 3.4e-11 72.8 149 34.9
Rhsim07G0029500 Rhododendron simsii HOM05D000036 ORTHO05D000095 7.6e-11 71.6 95 49.5
COL.COLO4_12519 Corchorus olitorius HOM05D000036 ORTHO05D000095 1.0e-10 71.2 144 38.2
AUR62013682 Chenopodium quinoa HOM05D000036 ORTHO05D000095 3.8e-10 69.3 100 45.0
Glyma.03G028900 Glycine max HOM05D000036 ORTHO05D000095 3.8e-10 69.3 157 31.8
vmacro13426 Vaccinium macrocarpon HOM05D000036 ORTHO05D000095 3.8e-10 69.3 98 46.9
EL10Ac1g00860 Beta vulgaris HOM05D000036 ORTHO05D000095 5.0e-10 68.9 105 42.9
Migut.B01611 Erythranthe guttata HOM05D000036 ORTHO05D000095 5.0e-10 68.9 103 47.6
Manes.05G047600 Manihot esculenta HOM05D000036 ORTHO05D000095 5.0e-10 68.9 133 39.1
Lj3g0019456 Lotus japonicus HOM05D000036 ORTHO05D000095 6.5e-10 68.6 132 37.1
RcHm_v2.0_Chr1g0349551 Rosa chinensis HOM05D000036 ORTHO05D000095 6.5e-10 68.6 182 33.0
FAN10G2615 Fragaria x ananassa HOM05D000036 ORTHO05D000095 8.4e-10 68.2 182 30.8
QL04p039855 Quercus lobata HOM05D000036 ORTHO05D036859 8.4e-10 68.2 131 39.7
Ca_20469_v3 Cicer arietinum L. HOM05D000036 ORTHO05D000095 1.1e-09 67.8 146 32.9
arahy.Tifrunner.gnm1.ann1.BHNE8U Arachis hypogaea HOM05D000036 ORTHO05D000095 1.4e-09 67.4 149 34.2
Lj9A567T71 Lonicera japonica HOM05D000036 ORTHO05D000095 1.4e-09 67.4 100 45.0
Psat7g230600 Pisum sativum HOM05D000036 ORTHO05D000095 1.9e-09 67.0 112 42.0
QL04p039920 Quercus lobata HOM05D000036 ORTHO05D000095 3.2e-09 66.2 131 39.7
TPR.G7591 Trifolium pratense HOM05D000036 ORTHO05D000095 3.2e-09 66.2 142 34.5
FAN10G2576 Fragaria x ananassa HOM05D000036 ORTHO05D000095 4.2e-09 65.9 104 39.4
Prupe.2G141200 Prunus persica HOM05D000036 ORTHO05D000095 5.5e-09 65.5 176 33.5
QL04p039778 Quercus lobata HOM05D000036 ORTHO05D000095 5.5e-09 65.5 131 38.9
Sc23g0003740 Simmondsia chinensis HOM05D000036 ORTHO05D000095 5.5e-09 65.5 96 39.6
TWI23G0624 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 5.5e-09 65.5 91 45.1
CARHR171120 Cardamine hirsuta HOM05D000036 ORTHO05D000095 1.2e-08 64.3 92 43.5
Gohir.A12G101200 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.2e-08 64.3 128 37.5
Gohir.D12G104100 Gossypium hirsutum HOM05D000036 ORTHO05D000095 1.2e-08 64.3 128 37.5
Gorai.008G113200 Gossypium raimondii HOM05D000036 ORTHO05D000095 1.2e-08 64.3 128 37.5
Lalb_Chr07g0190031 Lupinus albus HOM05D000036 ORTHO05D000095 1.2e-08 64.3 133 36.8
Sp5g02520 Schrenkiella parvula HOM05D000036 ORTHO05D000095 1.2e-08 64.3 123 36.6
Hund27373 Selenicereus undatus HOM05D000036 ORTHO05D000095 1.2e-08 64.3 174 33.9
Medtr4g025670 Medicago truncatula HOM05D000036 ORTHO05D000095 1.6e-08 63.9 134 32.1
TWI59G0676 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 1.6e-08 63.9 89 42.7
A09p52900 Brassica napus HOM05D000036 ORTHO05D000095 2.1e-08 63.5 123 37.4
BraA09t40722Z Brassica rapa HOM05D000036 ORTHO05D000095 2.1e-08 63.5 123 37.4
CAN.G911.4 Capsicum annuum HOM05D000036 ORTHO05D000095 2.1e-08 63.5 69 47.8
Actinidia12200 Actinidia chinensis HOM05D000036 ORTHO05D000095 2.7e-08 63.2 136 37.5
BcaC07g40592 Brassica carinata HOM05D000036 ORTHO05D000095 2.7e-08 63.2 123 37.4
C08p35670 Brassica napus HOM05D000036 ORTHO05D000095 2.7e-08 63.2 123 37.4
FAN03G1602 Fragaria x ananassa HOM05D000036 ORTHO05D000095 2.7e-08 63.2 104 38.5
FAN13G0677 Fragaria x ananassa HOM05D000036 ORTHO05D000095 2.7e-08 63.2 189 31.2
Nitab4.5_0000457g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000095 2.7e-08 63.2 93 48.4
PGR042G0521 Punica granatum HOM05D000036 ORTHO05D000095 3.5e-08 62.8 89 46.1
Peaxi162Scf00013g00287 Petunia axillaris HOM05D000036 ORTHO05D000095 4.6e-08 62.4 118 39.8
FvH4_7g11333 Fragaria vesca HOM05D000036 ORTHO05D000095 6.1e-08 62.0 104 37.5
FAN06G2838 Fragaria x ananassa HOM05D000036 ORTHO05D000095 6.1e-08 62.0 104 37.5
Phvul.010G080300 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 6.1e-08 62.0 124 37.1
BolC8t51158H Brassica oleracea HOM05D000036 ORTHO05D000095 7.9e-08 61.6 123 37.4
Thhalv10006472m.g Eutrema salsugineum HOM05D000036 ORTHO05D000095 7.9e-08 61.6 136 36.8
FAN06G0799 Fragaria x ananassa HOM05D001474 ORTHO05D001461 7.9e-08 61.6 106 39.6
Nitab4.5_0000703g0210 Nicotiana tabacum HOM05D000036 ORTHO05D000095 7.9e-08 61.6 144 37.5
CiPaw.14G027100 Carya illinoinensis HOM05D000036 ORTHO05D000095 1.3e-07 60.8 152 32.2
MELO3C006207.2 Cucumis melo HOM05D000036 ORTHO05D000095 1.3e-07 60.8 90 41.1
Sopen01g036810 Solanum pennellii HOM05D000036 ORTHO05D000095 1.8e-07 60.5 99 42.4
FvH4_7g11360 Fragaria vesca HOM05D000036 ORTHO05D000095 2.3e-07 60.1 155 31.6
SGA_v2.0_scaffold113G31770 Striga asiatica HOM05D000036 ORTHO05D000095 2.3e-07 60.1 174 30.5
THA.LOC104817235 Tarenaya hassleriana HOM05D000036 ORTHO05D000095 2.3e-07 60.1 86 41.9
Lj1g0014183 Lotus japonicus HOM05D000036 ORTHO05D000095 3.0e-07 59.7 130 34.6
Solyc01g091060.2 Solanum lycopersicum HOM05D000036 ORTHO05D000095 3.0e-07 59.7 128 36.7
FvH4_7g11330 Fragaria vesca HOM05D000036 ORTHO05D000095 3.9e-07 59.3 90 41.1
FAN06G2319 Fragaria x ananassa HOM05D000036 ORTHO05D000095 3.9e-07 59.3 183 32.8
Peaxi162Scf00038g02252 Petunia axillaris HOM05D000036 ORTHO05D000095 3.9e-07 59.3 111 30.6
VMungo0331G0818 Vigna mungo HOM05D000036 ORTHO05D000095 3.9e-07 59.3 176 30.1
Cc02_g24190 Coffea canephora HOM05D000036 ORTHO05D000095 8.7e-07 58.2 90 43.3
AT3G60730 Arabidopsis thaliana HOM05D000036 ORTHO05D000095 1.1e-06 57.8 87 41.4
AL5G43030 Arabidopsis lyrata HOM05D000036 ORTHO05D000095 1.5e-06 57.4 112 36.6
Nitab4.5_0010012g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000095 1.5e-06 57.4 97 32.0
arahy.Tifrunner.gnm1.ann1.151STP Arachis hypogaea HOM05D000036 ORTHO05D000095 1.9e-06 57.0 137 30.7
CsaV3_3G009850 Cucumis sativus L. HOM05D000036 ORTHO05D000095 1.9e-06 57.0 90 36.7
DCAR_009415 Daucus carota HOM05D000036 ORTHO05D000095 1.9e-06 57.0 84 39.3
PSO135G0226 Papaver somniferum HOM05D000036 ORTHO05D000095 4.3e-06 55.8 149 32.9
PSO135G0912 Papaver somniferum HOM05D000036 ORTHO05D000095 4.3e-06 55.8 159 31.4
SalBow5G0570 Salvia bowleyana HOM05D000036 ORTHO05D000095 4.3e-06 55.8 93 41.9
Carub.0005s2746 Capsella rubella HOM05D000036 ORTHO05D000095 5.7e-06 55.5 88 39.8
Manes.04G053900 Manihot esculenta HOM05D000036 ORTHO05D000095 5.7e-06 55.5 176 27.8
Prupe.1G178400 Prunus persica HOM05D000036 ORTHO05D000095 5.7e-06 55.5 174 25.3
arahy.Tifrunner.gnm1.ann1.81ICF1 Arachis hypogaea HOM05D000036 ORTHO05D000095 7.4e-06 55.1 138 30.4
arahy.Tifrunner.gnm1.ann1.DIU0LM Arachis hypogaea HOM05D000036 ORTHO05D000095 7.4e-06 55.1 137 30.7
ECA233G1649 Erigeron canadensis HOM05D000036 ORTHO05D000095 9.7e-06 54.7 62 43.5
ECA238G2588 Erigeron canadensis HOM05D000036 ORTHO05D000095 9.7e-06 54.7 163 30.1
FAN06G4308 Fragaria x ananassa HOM05D000036 ORTHO05D000095 9.7e-06 54.7 94 36.2


User provided reference genes

Program Settings