Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1928 Papaver somniferum HOM05D007712 ORTHO05D009755 3.6e-21 104.0 53 100.0
PSO063G7306 Papaver somniferum HOM05D007712 ORTHO05D009755 6.2e-21 103.2 52 98.1
Nn1g00955 Nelumbo nucifera HOM05D007712 ORTHO05D009755 1.3e-18 95.5 52 90.4
CSS0007152 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.7e-18 95.1 52 88.5
Prupe.5G067000 Prunus persica HOM05D007712 ORTHO05D009755 2.2e-18 94.7 52 86.5
ATR0317G046 Amborella trichopoda HOM05D007712 ORTHO05D009755 2.9e-18 94.4 53 86.8
MD06G1056600 Malus domestica HOM05D007712 ORTHO05D009755 3.8e-18 94.0 52 86.5
Nn6g33914 Nelumbo nucifera HOM05D007712 ORTHO05D009755 3.8e-18 94.0 52 92.3
MD04G1062500 Malus domestica HOM05D007712 ORTHO05D009755 4.9e-18 93.6 52 84.6
Thecc.03G249200 Theobroma cacao HOM05D007712 ORTHO05D009755 4.9e-18 93.6 52 86.5
Duzib068G1393 Durio zibethinus HOM05D007712 ORTHO05D009755 6.4e-18 93.2 53 86.8
DCAR_008500 Daucus carota HOM05D007712 ORTHO05D009755 8.4e-18 92.8 53 83.0
CSS0012443 Camellia sinensis var. sinensis HOM05D007712 ORTHO05D009755 1.1e-17 92.4 53 83.0
Glyma.05G061200 Glycine max HOM05D007712 ORTHO05D009755 1.1e-17 92.4 53 83.0
Glyma.17G143000 Glycine max HOM05D007712 ORTHO05D009755 1.1e-17 92.4 53 83.0
VMungo0251G2826 Vigna mungo HOM05D007712 ORTHO05D009755 1.1e-17 92.4 52 82.7
DCAR_006839 Daucus carota HOM05D007712 ORTHO05D009755 1.4e-17 92.0 53 83.0
Cpa.g.sc29.177 Carica papaya HOM05D007712 ORTHO05D009755 2.4e-17 91.3 53 83.0
Ca_21974_v3 Cicer arietinum L. HOM05D007712 ORTHO05D009755 2.4e-17 91.3 52 80.8
COL.COLO4_37150 Corchorus olitorius HOM05D007712 ORTHO05D009755 2.4e-17 91.3 53 81.1
Gohir.A12G216100 Gossypium hirsutum HOM05D007712 ORTHO05D009755 3.2e-17 90.9 53 81.1
TWI60G0592 Tripterygium wilfordii HOM05D007712 ORTHO05D009755 3.2e-17 90.9 52 82.7
Haze_07896 Corylus avellana HOM05D007712 ORTHO05D009755 4.2e-17 90.5 53 83.0
Duzib205G0100 Durio zibethinus HOM05D007712 ORTHO05D009755 4.2e-17 90.5 53 83.0
Gohir.D12G218700 Gossypium hirsutum HOM05D007712 ORTHO05D009755 4.2e-17 90.5 52 80.8
Gorai.008G234300 Gossypium raimondii HOM05D007712 ORTHO05D009755 4.2e-17 90.5 52 80.8
Hma1.2p1_0316F.1_g122970 Hydrangea macrophylla HOM05D007712 ORTHO05D009755 4.2e-17 90.5 53 83.0
Manes.01G082000 Manihot esculenta HOM05D007712 ORTHO05D009755 4.2e-17 90.5 52 82.7
Medtr4g100770 Medicago truncatula HOM05D007712 ORTHO05D009755 4.2e-17 90.5 52 80.8
RcHm_v2.0_Chr7g0203631 Rosa chinensis HOM05D007712 ORTHO05D009755 4.2e-17 90.5 52 84.6
Manes.02G041000 Manihot esculenta HOM05D007712 ORTHO05D009755 7.1e-17 89.7 52 80.8
Phvul.003G221800 Phaseolus vulgaris HOM05D007712 ORTHO05D009755 7.1e-17 89.7 53 81.1
Mapoly0033s0142 Marchantia polymorpha HOM05D007712 ORTHO05D009755 1.6e-16 88.6 52 80.8
Psat4g072600 Pisum sativum HOM05D007712 ORTHO05D009755 2.7e-16 87.8 52 76.9
Lj4g0003995 Lotus japonicus HOM05D007712 ORTHO05D009755 4.6e-16 87.0 53 79.2
Potri.001G156500 Populus trichocarpa HOM05D007712 ORTHO05D009755 4.6e-16 87.0 54 83.3
EL10Ac5g12378 Beta vulgaris HOM05D007712 ORTHO05D009755 6.0e-16 86.7 52 76.9
Potri.003G078100 Populus trichocarpa HOM05D007712 ORTHO05D009755 6.0e-16 86.7 53 79.2
Aa31LG2G12880 Aethionema arabicum HOM05D007712 ORTHO05D009755 1.0e-15 85.9 53 77.4
BcaNung00160 Brassica carinata HOM05D007712 ORTHO05D009755 2.3e-15 84.7 53 75.5
ClCG01G004140 Citrullus lanatus HOM05D007712 ORTHO05D009755 2.3e-15 84.7 52 76.9
PGR031G2779 Punica granatum HOM05D007712 ORTHO05D009755 2.3e-15 84.7 53 79.2
TAR629G1768 Trochodendron aralioides HOM05D007712 ORTHO05D009755 2.3e-15 84.7 52 80.8
Ciclev10023737m.g Citrus clementina HOM05D007712 ORTHO05D009755 3.0e-15 84.3 50 78.0
C01p25890 Brassica napus HOM05D007712 ORTHO05D009755 3.9e-15 84.0 53 73.6
CANSAT21G0844 Cannabis sativa HOM05D007712 ORTHO05D009755 3.9e-15 84.0 48 85.4
Lsat_1_v5_gn_6_18000 Lactuca sativa HOM05D007712 ORTHO05D009755 3.9e-15 84.0 53 75.5
AL7G38040 Arabidopsis lyrata HOM05D007712 ORTHO05D009755 6.7e-15 83.2 52 75.0
Carub.0007s2470 Capsella rubella HOM05D007712 ORTHO05D009755 8.7e-15 82.8 52 75.0
CARHR223220 Cardamine hirsuta HOM05D007712 ORTHO05D009755 8.7e-15 82.8 52 75.0
AT4G16695 Arabidopsis thaliana HOM05D007712 ORTHO05D009755 1.5e-14 82.0 52 73.1
CiPaw.11G080700 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.5e-14 82.0 52 76.9
HanXRQChr16g0510951 Helianthus annuus HOM05D007712 ORTHO05D009755 3.3e-14 80.9 54 70.4
Pp3c5_22940 Physcomitrium patens HOM05D007712 ORTHO05D009755 3.3e-14 80.9 52 75.0
A01p20590 Brassica napus HOM05D007712 ORTHO05D009755 9.6e-14 79.3 48 77.1
BolC1t02534H Brassica oleracea HOM05D007712 ORTHO05D009755 9.6e-14 79.3 47 78.7
BraA01t01987Z Brassica rapa HOM05D007712 ORTHO05D009755 9.6e-14 79.3 48 77.1
Sp7g15330 Schrenkiella parvula HOM05D007712 ORTHO05D009755 1.3e-13 79.0 49 75.5
THA.LOC104815500 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 1.3e-13 79.0 53 75.5
CiPaw.12G051200 Carya illinoinensis HOM05D007712 ORTHO05D009755 1.6e-13 78.6 53 79.2
MELO3C005524.2 Cucumis melo HOM05D007712 ORTHO05D009755 2.1e-13 78.2 54 74.1
Nitab4.5_0001381g0130 Nicotiana tabacum HOM05D007712 ORTHO05D009755 2.8e-13 77.8 47 72.3
Duzib268G1849 Durio zibethinus HOM05D007712 ORTHO05D009755 3.7e-13 77.4 51 68.6
HanXRQChr11g0345641 Helianthus annuus HOM05D007712 ORTHO05D009755 3.7e-13 77.4 46 76.1
Nitab4.5_0002289g0090 Nicotiana tabacum HOM05D007712 ORTHO05D009755 3.7e-13 77.4 52 69.2
Sed0021045 Sechium edule HOM05D007712 ORTHO05D009755 3.7e-13 77.4 54 74.1
BcaC06g33508 Brassica carinata HOM05D007712 ORTHO05D009755 4.8e-13 77.0 45 82.2
C07p48200 Brassica napus HOM05D007712 ORTHO05D009755 4.8e-13 77.0 45 82.2
BolC7t45343H Brassica oleracea HOM05D007712 ORTHO05D009755 4.8e-13 77.0 45 82.2
CAN.G1178.28 Capsicum annuum HOM05D007712 ORTHO05D009755 4.8e-13 77.0 49 71.4
HanXRQChr13g0400821 Helianthus annuus HOM05D007712 ORTHO05D009755 6.2e-13 76.6 46 76.1
Solyc08g078480.3 Solanum lycopersicum HOM05D007712 ORTHO05D009755 6.2e-13 76.6 47 72.3
PGSC0003DMG402004821 Solanum tuberosum HOM05D007712 ORTHO05D009755 8.1e-13 76.3 52 69.2
Eucgr.E00411 Eucalyptus grandis HOM05D007712 ORTHO05D009755 1.1e-12 75.9 51 74.5
HPP92_021033 Vanilla planifolia HOM05D007712 ORTHO05D009755 1.8e-12 75.1 51 76.5
HPP92_027434 Vanilla planifolia HOM05D007712 ORTHO05D009755 1.8e-12 75.1 51 76.5
Migut.A01117 Erythranthe guttata HOM05D007712 ORTHO05D009755 3.1e-12 74.3 55 72.7
vmacro00192 Vaccinium macrocarpon HOM05D007712 ORTHO05D009755 6.9e-12 73.2 54 68.5
SHI02516 Sapria himalayana HOM05D007712 ORTHO05D009755 2.0e-11 71.6 49 75.5
Lalb_Chr16g0386781 Lupinus albus HOM05D007712 ORTHO05D009755 3.4e-11 70.9 47 66.0
BraA08t33255Z Brassica rapa HOM05D007712 ORTHO05D009755 5.8e-11 70.1 45 73.3
Lalb_Chr05g0221211 Lupinus albus HOM05D007712 ORTHO05D009755 7.6e-11 69.7 47 66.0
CBR_g755 Chara braunii HOM05D007712 ORTHO05D009755 1.7e-10 68.6 52 65.4
unitig_744.g24472 Utricularia gibba HOM05D007712 ORTHO05D009755 4.9e-10 67.0 48 64.6
A03p50120 Brassica napus HOM05D007712 ORTHO05D009755 7.9e-08 59.7 46 60.9
FAN08G0196 Fragaria x ananassa HOM05D007712 ORTHO05D009755 1.8e-07 58.5 29 93.1
Os03g0102000 Oryza sativa ssp. japonica HOM05D007712 ORTHO05D009755 5.1e-07 57.0 58 51.7
THA.LOC104815513 Tarenaya hassleriana HOM05D007712 ORTHO05D009755 5.1e-07 57.0 32 84.4
FAN04G1285 Fragaria x ananassa HOM05D007712 ORTHO05D009755 8.7e-07 56.2 29 89.7
Atru.chr1.372 Acer truncatum HOM05D007712 ORTHO05D009755 7.4e-06 53.1 32 81.2
Atru.chr2.3306 Acer truncatum HOM05D007712 ORTHO05D009755 7.4e-06 53.1 32 81.2


User provided reference genes

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