Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 0.0e+00 2177.9 1151 100.0
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 0.0e+00 2055.8 1152 93.9
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 8.6e-75 286.6 1287 29.0
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.9e-62 245.0 1055 30.1
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 3.8e-62 244.6 1279 27.4
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 1.5e-55 222.6 1277 25.5
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 2.9e-54 218.4 1213 28.1
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 7.8e-52 210.3 1060 27.6
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 3.6e-49 201.4 1210 26.9
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 5.4e-45 187.6 869 27.2
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 2.7e-44 185.3 1272 25.3
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.8e-40 172.6 400 37.0
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 1.5e-39 169.5 1335 25.9
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 1.1e-37 163.3 1350 23.9
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 7.1e-37 160.6 1340 25.4
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.0e-35 156.8 905 27.4
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 2.1e-33 149.1 960 24.6
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 2.1e-33 149.1 1382 24.5
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 4.8e-33 147.9 1238 25.1
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 4.0e-32 144.8 1026 24.5
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 4.5e-31 141.4 1062 26.6
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 1.7e-30 139.4 1254 22.9
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 1.3e-27 129.8 1044 25.0
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 1.8e-27 129.4 1165 24.1
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 8.7e-27 127.1 898 24.7
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 1.5e-26 126.3 1332 23.8
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.9e-26 125.9 1332 23.2
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 2.5e-26 125.6 794 24.7
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 2.5e-26 125.6 850 26.0
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 2.5e-26 125.6 1263 23.9
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 3.3e-26 125.2 1085 26.4
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 1.6e-25 122.9 1057 25.2
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 6.3e-25 120.9 888 24.7
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 1.4e-24 119.8 718 27.0
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 1.2e-23 116.7 1330 23.5
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 2.0e-23 115.9 1318 22.6
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 4.5e-23 114.8 873 25.0
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 5.9e-23 114.4 1337 23.1
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.4e-21 109.8 1327 22.1
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 1.9e-21 109.4 1330 23.4
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 1.3e-19 103.2 922 25.9
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 3.0e-19 102.1 1152 22.1
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 1.1e-18 100.1 902 22.7
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 1.9e-18 99.4 1227 23.7
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.9e-18 99.4 1090 22.8
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 4.3e-18 98.2 864 24.3
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 9.7e-18 97.1 1228 22.8
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 2.2e-17 95.9 627 26.2
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 4.8e-17 94.7 595 24.5
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 1.1e-16 93.6 831 23.7
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 1.4e-16 93.2 1071 25.1
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 3.1e-16 92.0 326 28.5
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 4.1e-16 91.7 687 22.7
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 4.1e-16 91.7 1079 23.8
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 9.1e-16 90.5 330 28.8
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 9.1e-16 90.5 555 23.1
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 2.0e-15 89.4 534 24.5
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 2.6e-15 89.0 544 24.6
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 2.2e-14 85.9 379 27.7
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 2.9e-14 85.5 1116 23.8
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 1.9e-13 82.8 976 23.7
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 1.9e-13 82.8 1042 23.1
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 1.9e-13 82.8 408 26.0
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 4.2e-13 81.6 1081 23.8
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 4.2e-13 81.6 1141 23.0
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 9.4e-13 80.5 971 23.1
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 9.4e-13 80.5 400 26.5
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 1.2e-12 80.1 398 27.6
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.1e-12 79.3 892 23.7
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 6.1e-12 77.8 597 24.0
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 7.9e-12 77.4 1084 22.5
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.0e-11 77.0 956 21.9
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 1.0e-11 77.0 892 23.8
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 1.4e-11 76.6 893 24.5
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 1.8e-11 76.3 1324 21.9
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 3.0e-11 75.5 330 28.2
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 3.9e-11 75.1 241 29.9
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 8.8e-11 73.9 881 21.3
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 8.8e-11 73.9 362 28.2
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 8.8e-11 73.9 629 24.3
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 1.1e-10 73.6 411 26.3
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 3.3e-10 72.0 1045 21.2
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 4.4e-10 71.6 386 25.4
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 7.4e-10 70.9 491 24.4
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 3.7e-09 68.6 229 27.9
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 4.8e-09 68.2 742 24.4
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 4.8e-09 68.2 646 25.5
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 4.8e-09 68.2 501 22.6
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 8.2e-09 67.4 536 24.4
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 8.2e-09 67.4 1117 21.7
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 9.1e-08 63.9 258 28.7
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 9.1e-08 63.9 627 22.2
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 2.6e-07 62.4 767 21.9
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 4.5e-07 61.6 549 22.2
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 4.5e-07 61.6 1081 22.7
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.0e-06 60.5 722 21.6
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.0e-06 60.5 722 21.6
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 1.0e-06 60.5 567 23.3
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 1.0e-06 60.5 668 21.4
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 3.8e-06 58.5 574 23.0


User provided reference genes

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