Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 4.3e-113 411.4 215 100.0
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 5.9e-110 401.0 215 97.7
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 1.0e-69 267.3 231 58.9
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 2.9e-69 265.8 226 61.9
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 5.5e-68 261.5 225 60.0
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 7.2e-68 261.2 216 66.2
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.2e-67 260.4 232 62.5
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 2.7e-67 259.2 219 62.1
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 3.6e-67 258.8 225 59.1
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 6.1e-67 258.1 231 60.2
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.0e-66 257.3 231 60.2
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.0e-66 257.3 224 58.9
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 1.0e-66 257.3 228 59.2
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 1.8e-66 256.5 224 58.5
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.8e-66 256.5 222 58.1
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.3e-66 256.1 231 58.4
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 4.0e-66 255.4 232 57.8
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 8.8e-66 254.2 225 58.7
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 8.8e-66 254.2 235 58.3
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.2e-65 253.8 232 58.6
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.6e-65 252.7 219 59.8
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 3.4e-65 252.3 226 58.0
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 5.7e-65 251.5 228 57.5
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 7.5e-65 251.1 224 58.0
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 1.7e-64 250.0 215 61.4
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 2.2e-64 249.6 230 57.0
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 2.8e-64 249.2 230 56.5
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 8.3e-64 247.7 220 59.1
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 8.3e-64 247.7 232 58.2
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 1.1e-63 247.3 223 57.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 1.1e-63 247.3 218 61.0
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 3.1e-63 245.7 231 54.5
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 5.4e-63 245.0 230 57.8
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 7.0e-63 244.6 236 55.1
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 2.0e-62 243.0 227 55.1
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 3.5e-62 242.3 227 55.1
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 4.5e-62 241.9 224 56.2
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 4.5e-62 241.9 232 56.5
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 7.7e-62 241.1 227 54.6
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 7.7e-62 241.1 223 57.4
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 7.7e-62 241.1 228 54.8
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 1.0e-61 240.7 212 59.4
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 1.3e-61 240.4 230 54.8
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 2.3e-61 239.6 227 54.2
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 2.3e-61 239.6 219 56.2
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 2.3e-61 239.6 227 55.1
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 2.9e-61 239.2 224 56.7
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 3.8e-61 238.8 216 60.2
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 5.0e-61 238.4 230 53.9
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 6.6e-61 238.0 224 56.7
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 8.6e-61 237.7 226 55.3
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 1.9e-60 236.5 229 55.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 2.5e-60 236.1 216 55.1
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 2.5e-60 236.1 216 55.1
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 3.3e-60 235.7 225 56.4
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.3e-60 235.7 233 54.1
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 5.6e-60 235.0 220 57.7
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 7.3e-60 234.6 225 55.6
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 1.2e-59 233.8 226 54.4
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 1.6e-59 233.4 230 54.8
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 2.1e-59 233.0 220 56.8
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 2.1e-59 233.0 215 57.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 2.8e-59 232.6 228 53.9
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 2.8e-59 232.6 215 56.7
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 4.7e-59 231.9 218 56.4
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 4.7e-59 231.9 231 55.8
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 6.1e-59 231.5 227 55.5
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 8.0e-59 231.1 224 53.6
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 1.4e-58 230.3 208 56.7
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.4e-58 230.3 228 55.3
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 2.3e-58 229.6 225 54.7
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 4.0e-58 228.8 212 58.5
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 4.0e-58 228.8 215 56.7
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.4e-57 225.7 225 54.2
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 7.5e-57 224.6 220 55.0
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 2.9e-56 222.6 216 56.5
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 8.3e-56 221.1 223 52.0
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 2.0e-54 216.5 223 51.1
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 2.0e-54 216.5 227 52.4
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 1.1e-52 210.7 196 57.1
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 1.9e-52 209.9 241 51.0
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 3.3e-52 209.1 230 52.2
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 2.1e-51 206.5 282 46.8
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 2.8e-51 206.1 208 56.2
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.6e-51 205.7 228 50.9
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 3.6e-51 205.7 211 54.0
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.4e-50 203.8 227 49.8
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 3.1e-50 202.6 247 46.6
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 5.2e-50 201.8 224 53.6
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 6.8e-50 201.4 231 50.2
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 5.8e-49 198.4 211 51.7
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 7.5e-49 198.0 238 47.5
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 7.5e-49 198.0 215 53.0
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 2.9e-48 196.1 216 49.5
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 6.4e-48 194.9 223 48.9
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.1e-47 194.1 230 47.8
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.9e-47 193.4 237 47.3
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.0e-46 189.9 227 48.0
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.7e-45 186.8 218 47.7
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 2.3e-45 186.4 233 43.8
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 6.6e-45 184.9 208 51.0
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 4.3e-44 182.2 221 48.4
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.2e-43 180.6 220 48.2
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 8.3e-40 167.9 165 57.0
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 7.1e-39 164.9 206 48.1
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 3.0e-37 159.5 189 50.3
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.8e-34 150.2 164 50.6
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.7e-32 143.7 157 49.7
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 5.4e-31 138.7 159 48.4
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 3.1e-26 122.9 89 66.3
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 8.9e-26 121.3 178 43.8
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 1.2e-25 120.9 133 53.4
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.5e-25 120.6 90 67.8
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 4.4e-25 119.0 108 60.2
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 7.6e-25 118.2 210 36.7
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-24 116.3 261 31.0
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.4e-23 114.0 82 63.4
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 2.7e-22 109.8 274 30.7
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 8.7e-21 104.8 93 55.9
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 2.6e-17 93.2 197 36.5
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 5.8e-17 92.0 152 40.8
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.8e-17 92.0 152 40.8
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.7e-16 90.5 63 68.3
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.4e-15 87.4 74 60.8
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 7.1e-15 85.1 83 50.6
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 9.3e-15 84.7 82 50.0
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.1e-14 83.6 66 63.6
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 2.1e-14 83.6 83 49.4
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 3.0e-13 79.7 83 48.2
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 3.1e-10 69.7 51 66.7
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 3.4e-09 66.2 77 42.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 8.4e-08 61.6 55 61.8
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 1.1e-07 61.2 85 44.7


User provided reference genes

Program Settings