Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 1.8e-279 965.3 493 100.0
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 6.4e-269 930.2 494 96.2
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 3.0e-141 506.1 319 80.6
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 3.7e-136 489.2 499 52.9
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 4.9e-136 488.8 498 53.6
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.9e-135 486.9 499 53.7
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 4.1e-135 485.7 499 52.9
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 2.3e-133 479.9 489 52.6
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 2.5e-132 476.5 499 54.1
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 7.3e-132 474.9 489 52.1
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.1e-130 471.1 496 52.4
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 1.1e-130 471.1 496 52.2
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 1.8e-130 470.3 497 51.5
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 5.2e-130 468.8 497 50.7
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.2e-130 468.8 497 50.9
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 1.2e-129 467.6 498 51.0
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 7.6e-129 464.9 486 52.9
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 7.6e-129 464.9 497 51.7
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.9e-128 463.0 490 51.0
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 3.8e-128 462.6 489 50.7
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 3.8e-128 462.6 496 51.4
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 6.4e-128 461.8 487 50.3
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 8.4e-128 461.5 500 50.8
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 1.1e-127 461.1 501 51.1
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.4e-127 459.9 489 50.5
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 2.4e-127 459.9 479 52.8
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.4e-127 458.8 497 49.9
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 6.0e-126 455.3 489 47.9
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 6.0e-126 455.3 478 51.5
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.7e-125 453.8 497 50.1
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 5.1e-125 452.2 485 49.5
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 5.1e-125 452.2 489 49.7
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 6.6e-125 451.8 482 52.1
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 8.7e-125 451.4 497 51.1
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 1.9e-124 450.3 498 48.6
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 1.9e-124 450.3 495 49.5
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 2.5e-124 449.9 484 49.8
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.3e-124 449.5 500 49.0
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.3e-124 449.5 485 49.3
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 4.3e-124 449.1 493 51.5
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 5.6e-124 448.7 486 51.0
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 7.3e-124 448.4 500 49.2
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 2.8e-123 446.4 500 49.0
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 3.6e-123 446.0 489 49.1
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 6.2e-123 445.3 500 48.6
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 1.4e-122 444.1 482 48.8
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 4.0e-122 442.6 496 48.4
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 4.0e-122 442.6 500 49.2
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 5.3e-122 442.2 473 49.3
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 5.3e-122 442.2 489 48.5
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 6.9e-122 441.8 489 48.9
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 6.9e-122 441.8 496 49.4
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 9.0e-122 441.4 485 48.5
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 1.2e-121 441.0 500 48.2
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 1.2e-121 441.0 495 47.9
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.5e-121 440.7 485 48.7
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 2.9e-120 436.4 478 49.4
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 6.4e-120 435.3 493 51.3
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 3.2e-119 433.0 499 48.9
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 5.4e-119 432.2 498 47.6
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 3.5e-118 429.5 487 49.3
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 4.6e-118 429.1 498 49.0
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 7.8e-118 428.3 535 46.4
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.7e-117 427.2 487 48.3
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 1.7e-117 427.2 488 48.8
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 1.7e-117 427.2 501 47.9
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 2.3e-117 426.8 495 48.7
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 3.9e-117 426.0 490 48.4
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 5.1e-117 425.6 488 46.5
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 6.6e-117 425.2 499 46.5
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 1.1e-116 424.5 488 46.9
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 1.1e-116 424.5 488 46.9
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 1.1e-116 424.5 493 47.9
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 1.5e-116 424.1 486 47.7
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 4.3e-116 422.5 486 48.1
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 9.6e-116 421.4 472 48.3
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 1.3e-115 421.0 485 47.6
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 8.1e-115 418.3 485 48.9
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 1.8e-114 417.2 486 47.9
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 2.4e-114 416.8 498 46.8
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 4.0e-114 416.0 487 47.4
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 9.0e-114 414.8 485 47.2
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 1.5e-113 414.1 483 48.0
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 2.0e-113 413.7 489 47.6
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 3.4e-113 412.9 497 46.5
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 4.5e-113 412.5 484 47.3
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 5.8e-113 412.1 490 47.1
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 7.6e-113 411.8 482 48.3
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 2.9e-112 409.8 482 48.1
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 6.4e-112 408.7 486 47.5
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 2.4e-111 406.8 482 48.3
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.2e-111 406.0 497 46.1
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 1.6e-110 404.1 370 56.5
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.7e-110 403.3 483 46.4
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 6.7e-109 398.7 488 46.9
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 2.5e-108 396.7 483 46.8
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 2.5e-108 396.7 497 45.9
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 1.3e-107 394.4 490 46.7
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.3e-107 394.4 486 46.3
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 3.7e-107 392.9 497 45.9
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 3.1e-106 389.8 485 44.5
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 9.9e-105 384.8 418 50.7
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.7e-104 384.0 485 44.5
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 3.3e-100 369.8 502 42.4
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 1.3e-99 367.9 488 44.1
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 2.8e-99 366.7 489 44.8
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 2.6e-97 360.1 373 50.4
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 3.4e-97 359.8 375 51.7
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 3.8e-96 356.3 466 45.5
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 3.8e-96 356.3 182 97.8
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 7.1e-95 352.1 531 38.2
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.5e-92 344.4 482 41.9
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 2.5e-87 327.0 470 42.3
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 2.1e-86 323.9 473 43.1
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 1.0e-85 321.6 432 43.1
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 2.8e-83 313.5 494 42.1
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 2.2e-80 303.9 408 44.6
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 3.6e-78 296.6 490 40.8
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 7.9e-78 295.4 326 48.5
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 4.4e-76 289.7 502 35.3
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 4.4e-76 289.7 284 52.8
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 2.2e-75 287.3 374 43.0
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 8.2e-75 285.4 283 53.0
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 1.1e-74 285.0 409 41.1
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 3.1e-74 283.5 285 51.9
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.1e-70 270.8 255 54.5
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 1.0e-69 268.5 141 95.0
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 2.3e-69 267.3 134 99.3
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.7e-67 260.0 495 36.0
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 2.4e-66 257.3 444 36.5
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 1.7e-64 251.1 373 42.6
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 5.5e-63 246.1 491 36.9
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 1.2e-60 238.4 537 31.5
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 1.1e-58 231.9 480 32.7
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 2.0e-57 227.6 416 35.1
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 4.5e-57 226.5 598 30.8
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 6.5e-56 222.6 478 34.7
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 4.7e-54 216.5 183 62.3
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 1.2e-52 211.8 254 47.6
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 1.2e-52 211.8 291 41.6
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 9.8e-52 208.8 354 37.3
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.1e-50 203.8 375 34.7
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 3.1e-50 203.8 158 62.0
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.7e-48 198.0 370 35.1
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.8e-48 196.8 432 31.7
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 1.1e-47 195.3 253 45.5
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 4.2e-47 193.4 252 43.3
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 1.6e-41 174.9 171 55.6
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.1e-39 168.7 272 39.7
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 2.5e-39 167.5 241 41.5
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 7.3e-39 166.0 536 27.1
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 1.0e-37 162.2 252 39.3
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 4.0e-37 160.2 451 29.9
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 3.4e-36 157.1 194 44.3
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 1.8e-29 134.8 249 36.5
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 6.8e-29 132.9 476 27.1
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 8.3e-27 125.9 136 51.5
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 1.7e-24 118.2 149 43.6
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 3.0e-24 117.5 124 48.4
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 3.9e-24 117.1 96 61.5
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 8.6e-24 115.9 94 58.5
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 9.5e-23 112.5 142 46.5
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 8.1e-22 109.4 116 50.0
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 8.1e-22 109.4 147 42.2
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 6.2e-14 83.2 103 40.8
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.4e-13 82.0 115 38.3
PSO013G0258 Papaver somniferum HOM05D000007 ORTHO05D000676 4.2e-10 70.5 67 59.7
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 3.5e-09 67.4 106 28.3
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 1.3e-08 65.5 246 24.4
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea HOM05D001952 ORTHO05D004913 2.5e-07 61.2 146 31.5
FAN03G1970 Fragaria x ananassa HOM05D001952 ORTHO05D004913 2.5e-07 61.2 73 46.6


User provided reference genes

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