Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 5.9e-48 194.1 116 100.0
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.1e-43 179.9 116 94.8
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.9e-22 109.4 121 60.3
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 3.0e-20 102.1 103 54.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 4.4e-19 98.2 121 60.3
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.3e-18 96.7 83 60.2
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 3.7e-18 95.1 120 59.2
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 3.7e-18 95.1 65 84.6
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.1e-17 93.6 121 59.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.1e-17 93.6 111 51.4
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.8e-17 92.8 66 65.2
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.8e-17 92.8 116 49.1
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.8e-17 92.8 118 56.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 2.4e-17 92.4 80 61.2
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.1e-17 92.0 113 60.2
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 4.1e-17 91.7 113 48.7
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 4.1e-17 91.7 118 56.8
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 4.1e-17 91.7 69 84.1
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 5.3e-17 91.3 85 60.0
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 9.1e-17 90.5 79 60.8
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 1.2e-16 90.1 84 57.1
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.2e-16 90.1 119 50.4
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.2e-16 90.1 93 68.8
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.6e-16 89.7 81 59.3
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.6e-16 89.7 82 70.7
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.0e-16 89.4 93 67.7
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 3.5e-16 88.6 79 59.5
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 4.5e-16 88.2 93 48.4
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 5.9e-16 87.8 83 63.9
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 1.0e-15 87.0 63 65.1
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.0e-15 87.0 78 60.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.3e-15 86.7 63 65.1
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.3e-15 86.7 88 53.4
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 1.3e-15 86.7 88 53.4
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.7e-15 86.3 111 45.0
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.7e-15 86.3 84 53.6
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.7e-15 86.3 114 44.7
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.2e-15 85.9 63 65.1
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.2e-15 85.9 63 65.1
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 2.2e-15 85.9 77 57.1
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.2e-15 85.9 84 53.6
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 2.2e-15 85.9 84 53.6
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.2e-15 85.9 79 58.2
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 2.9e-15 85.5 63 63.5
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 2.9e-15 85.5 63 63.5
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 2.9e-15 85.5 82 54.9
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 3.8e-15 85.1 82 69.5
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 3.8e-15 85.1 76 59.2
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.8e-15 85.1 127 46.5
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 3.8e-15 85.1 61 62.3
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 6.5e-15 84.3 63 61.9
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 6.5e-15 84.3 63 61.9
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 6.5e-15 84.3 63 61.9
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 6.5e-15 84.3 130 43.8
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 6.5e-15 84.3 77 55.8
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 6.5e-15 84.3 119 46.2
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.1e-14 83.6 77 57.1
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.1e-14 83.6 76 59.2
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.1e-14 83.6 84 70.2
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.5e-14 83.2 133 42.1
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.5e-14 83.2 121 45.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.9e-14 82.8 82 54.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 2.5e-14 82.4 102 49.0
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.5e-14 82.4 61 77.0
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 4.2e-14 81.6 128 43.8
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 4.2e-14 81.6 127 44.9
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 5.5e-14 81.3 68 76.5
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.2e-13 80.1 81 55.6
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 3.0e-12 75.5 99 46.5
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.3e-10 70.1 51 68.6
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.4e-09 66.6 66 51.5
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.8e-09 66.2 47 63.8
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.4e-09 65.9 55 56.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.4e-09 65.9 55 56.4
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 5.4e-09 64.7 47 63.8
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 9.1e-09 63.9 76 46.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 3.5e-08 62.0 117 40.2
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 5.9e-08 61.2 69 50.7
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 1.1e-06 57.0 45 62.2
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 3.3e-06 55.5 45 62.2


User provided reference genes

Program Settings