Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.4e-82 309.7 168 100.0
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 5.3e-82 307.8 168 98.8
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.2e-41 173.7 164 56.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 3.8e-40 168.7 174 52.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 8.5e-40 167.5 171 55.6
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 3.2e-39 165.6 163 55.2
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.1e-38 162.9 165 52.1
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 2.1e-38 162.9 164 54.9
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.6e-38 162.2 164 53.0
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 6.1e-38 161.4 164 51.8
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 8.0e-38 161.0 164 53.7
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.4e-37 160.2 164 53.0
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.8e-37 159.8 164 54.3
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 3.0e-37 159.1 164 52.4
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 6.7e-37 157.9 165 52.1
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 6.7e-37 157.9 164 52.4
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.1e-36 157.1 164 52.4
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.5e-36 156.8 164 52.4
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.3e-36 155.6 164 51.2
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 5.7e-36 154.8 164 51.8
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.7e-35 153.3 164 51.2
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 2.2e-35 152.9 164 49.4
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 6.3e-35 151.4 171 49.7
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 8.2e-35 151.0 164 50.0
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.4e-34 150.2 164 49.4
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 2.4e-34 149.4 163 49.7
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 4.1e-34 148.7 164 51.2
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 7.0e-34 147.9 164 50.0
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 1.2e-33 147.1 168 48.2
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 1.6e-33 146.7 164 48.8
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 2.0e-33 146.4 164 49.4
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.0e-33 146.4 154 48.7
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 2.7e-33 146.0 173 48.6
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 4.5e-33 145.2 171 48.0
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.3e-32 143.7 169 50.3
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 1.7e-32 143.3 164 47.0
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 5.0e-32 141.7 166 50.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.5e-31 140.2 166 49.4
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 2.5e-31 139.4 164 48.8
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.5e-31 138.3 164 47.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.5e-31 138.3 164 47.6
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 9.4e-31 137.5 165 44.2
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 9.4e-31 137.5 165 47.9
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.2e-30 137.1 164 47.0
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.6e-30 136.7 134 55.2
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 2.1e-30 136.3 165 48.5
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 3.6e-30 135.6 169 46.7
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 3.6e-30 135.6 164 47.0
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 5.2e-29 131.7 161 47.8
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 6.8e-29 131.3 166 46.4
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 2.6e-28 129.4 165 44.8
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 2.6e-28 129.4 164 45.1
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 1.3e-27 127.1 164 44.5
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 2.2e-27 126.3 165 43.0
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 2.2e-27 126.3 155 47.1
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 3.7e-27 125.6 171 43.3
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 4.8e-27 125.2 165 45.5
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 6.3e-27 124.8 164 45.7
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.4e-26 122.9 164 43.9
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 7.0e-26 121.3 160 45.0
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 9.1e-26 120.9 164 43.3
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.2e-25 120.6 164 43.3
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 3.5e-25 119.0 164 45.1
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 4.5e-25 118.6 164 43.3
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.7e-24 116.7 140 49.3
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 6.5e-24 114.8 118 50.0
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 8.5e-24 114.4 165 39.4
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.9e-23 113.2 164 40.9
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 3.2e-23 112.5 164 40.9
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 9.4e-23 110.9 164 41.5
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 9.4e-23 110.9 164 41.5
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 9.4e-23 110.9 164 41.5
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.7e-22 109.4 164 40.9
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.7e-22 109.4 164 40.9
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 3.6e-22 109.0 138 44.2
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 4.7e-22 108.6 165 39.4
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 8.0e-22 107.8 171 39.8
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.8e-21 106.7 170 38.2
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 3.0e-21 105.9 172 42.4
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 4.0e-21 105.5 115 51.3
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 5.2e-21 105.1 192 35.9
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 5.2e-21 105.1 172 38.4
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 5.2e-21 105.1 165 39.4
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 6.8e-21 104.8 169 39.6
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 1.5e-20 103.6 172 38.4
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 1.5e-20 103.6 172 39.5
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.5e-20 103.6 165 39.4
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.5e-20 103.6 165 40.0
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 1.5e-20 103.6 165 40.0
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 1.5e-20 103.6 171 38.6
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 4.4e-20 102.1 171 42.1
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 7.5e-20 101.3 113 49.6
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 7.5e-20 101.3 163 35.0
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 9.8e-20 100.9 171 39.8
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.3e-19 100.5 161 39.1
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 3.7e-19 99.0 109 49.5
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 4.9e-19 98.6 171 36.8
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 2.4e-18 96.3 207 33.8
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 4.1e-18 95.5 171 38.0
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 7.7e-17 91.3 118 44.9
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 7.7e-17 91.3 169 34.9
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 1.0e-16 90.9 108 47.2
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 5.0e-16 88.6 128 43.0
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 8.9e-13 77.8 101 42.6
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 8.9e-13 77.8 120 40.0
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 4.4e-12 75.5 167 29.3
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 9.8e-12 74.3 164 32.9
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 2.2e-11 73.2 106 40.6
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 6.4e-11 71.6 167 31.1
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 1.1e-10 70.9 72 52.8
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 1.8e-10 70.1 68 57.4
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 9.2e-10 67.8 125 36.8
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 1.2e-09 67.4 164 31.1
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 2.7e-09 66.2 144 34.0
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 8.6e-08 61.2 131 30.5
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 8.0e-06 54.7 38 68.4


User provided reference genes

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