Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 9.5e-153 543.5 280 100.0
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 2.0e-150 535.8 278 98.2
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 3.3e-105 385.6 273 75.1
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 1.1e-97 360.5 286 68.9
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 4.3e-97 358.6 286 68.5
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 9.7e-97 357.5 286 67.8
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 1.3e-96 357.1 231 78.8
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.6e-96 356.7 245 74.3
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 2.2e-96 356.3 233 78.1
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.8e-96 355.9 225 80.4
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 3.7e-96 355.5 277 67.9
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 1.4e-95 353.6 233 78.1
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 5.3e-95 351.7 257 72.8
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 5.3e-95 351.7 243 77.4
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 5.3e-95 351.7 243 77.8
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.2e-94 350.5 251 73.7
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.2e-94 350.5 232 77.6
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.6e-94 349.4 280 68.6
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 3.4e-94 349.0 272 70.2
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 3.4e-94 349.0 281 67.3
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 5.9e-94 348.2 235 75.3
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.3e-93 347.1 299 65.9
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.7e-93 346.7 222 77.9
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 2.2e-93 346.3 225 78.7
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 5.0e-93 345.1 229 78.2
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 6.5e-93 344.7 234 73.9
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 1.1e-92 344.0 257 69.6
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 3.2e-92 342.4 262 70.2
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 4.2e-92 342.0 281 67.3
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 4.2e-92 342.0 281 67.3
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.1e-91 339.7 237 73.8
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 2.7e-91 339.3 236 73.3
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 3.6e-91 339.0 236 72.9
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 3.6e-91 339.0 261 68.6
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 4.6e-91 338.6 275 65.1
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 7.9e-91 337.8 231 74.5
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 1.0e-90 337.4 265 67.9
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 1.0e-90 337.4 225 76.0
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 1.0e-90 337.4 231 74.5
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 1.0e-90 337.4 238 73.5
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 1.4e-90 337.0 273 67.4
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 1.4e-90 337.0 283 64.3
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 8.8e-90 334.3 260 67.3
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 8.8e-90 334.3 220 78.2
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 8.8e-90 334.3 217 78.8
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.1e-89 334.0 270 65.6
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 1.5e-89 333.6 268 64.2
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.0e-89 333.2 279 64.5
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 2.0e-89 333.2 274 63.9
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 2.5e-89 332.8 232 72.8
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 7.4e-89 331.3 293 62.8
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 7.4e-89 331.3 220 77.7
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 1.3e-88 330.5 234 74.4
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 1.7e-88 330.1 219 77.6
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.8e-88 329.3 247 70.0
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 3.7e-88 328.9 239 72.4
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 4.8e-88 328.6 268 63.4
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 4.8e-88 328.6 226 73.5
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 6.3e-88 328.2 241 71.8
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 6.3e-88 328.2 235 72.3
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 1.1e-87 327.4 212 77.8
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 3.1e-87 325.9 249 69.9
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 5.3e-87 325.1 241 69.7
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 5.3e-87 325.1 279 63.8
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 9.1e-87 324.3 264 65.2
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 9.1e-87 324.3 241 69.7
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 9.1e-87 324.3 241 69.7
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.1e-87 324.3 279 63.1
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 1.5e-86 323.6 254 68.1
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 2.0e-86 323.2 241 71.0
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 2.6e-86 322.8 254 68.1
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 4.5e-86 322.0 241 68.9
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.0e-85 320.9 241 69.3
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.0e-85 320.9 210 75.2
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.0e-85 320.9 279 63.1
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 2.9e-85 319.3 237 71.7
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 5.0e-85 318.5 237 70.0
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 5.0e-85 318.5 222 74.3
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 8.5e-85 317.8 256 63.7
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 7.2e-84 314.7 288 61.1
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.0e-82 310.8 183 81.4
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 1.8e-82 310.1 312 57.7
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 8.8e-82 307.8 236 69.1
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.5e-81 307.0 183 79.8
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 2.8e-80 302.8 277 60.3
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.8e-80 302.8 210 72.9
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 1.4e-79 300.4 234 68.4
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 7.0e-79 298.1 204 76.5
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 9.1e-79 297.7 182 80.8
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 2.0e-78 296.6 208 74.0
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 2.6e-78 296.2 231 69.7
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 4.5e-78 295.4 325 55.1
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.9e-76 290.0 220 67.7
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 2.1e-75 286.6 213 66.7
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 9.7e-73 277.7 245 64.1
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 3.7e-72 275.8 212 64.2
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 8.2e-72 274.6 207 68.1
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 1.1e-71 274.2 196 74.0
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.2e-70 270.8 233 63.9
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 2.0e-70 270.0 241 61.0
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 4.5e-70 268.9 223 65.5
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 5.0e-69 265.4 168 80.4
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 6.5e-69 265.0 192 68.8
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 3.0e-66 256.1 208 61.1
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 6.8e-58 228.4 216 61.1
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 5.0e-53 212.2 231 53.7
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 2.5e-52 209.9 134 76.1
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 6.1e-51 205.3 139 77.0
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 1.4e-47 194.1 165 64.2
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 1.1e-44 184.5 224 47.3
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 4.3e-44 182.6 216 45.4
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 2.1e-43 180.3 241 44.0
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 1.8e-42 177.2 242 48.3
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 7.0e-39 165.2 119 71.4
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 5.0e-37 159.1 97 80.4
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 3.3e-36 156.4 97 79.4
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 1.2e-33 147.9 127 65.4
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 3.2e-31 139.8 202 45.0
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 7.1e-31 138.7 296 37.5
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 9.2e-31 138.3 80 81.2
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 2.5e-28 130.2 78 79.5
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 6.2e-27 125.6 78 78.2
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 2.9e-24 116.7 78 74.4
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 5.2e-18 95.9 145 50.3
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 6.8e-18 95.5 79 67.1
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 9.3e-15 85.1 52 76.9
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 1.2e-14 84.7 50 80.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 1.6e-14 84.3 51 78.4
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 2.7e-14 83.6 75 57.3
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 9.6e-12 75.1 55 65.5
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 2.4e-10 70.5 47 68.1
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 9.0e-10 68.6 48 66.7
unitig_0.g10 Utricularia gibba HOM05D006042 ORTHO05D007658 4.2e-07 59.7 55 56.4
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 7.1e-07 58.9 47 59.6


User provided reference genes

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