Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 2219.1 1135 100.0
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 2152.9 1136 96.8
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 0.0e+00 1506.1 1137 67.8
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 0.0e+00 1490.7 1141 68.5
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 0.0e+00 1459.1 1141 66.4
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 0.0e+00 1431.0 1144 64.8
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 0.0e+00 1402.5 1143 64.4
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 0.0e+00 1379.8 1149 63.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 0.0e+00 1341.3 1146 61.8
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 0.0e+00 1333.9 1154 61.0
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1332.8 1149 60.6
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 0.0e+00 1321.2 1140 60.6
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1317.8 1135 60.7
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 0.0e+00 1315.8 1141 59.9
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 0.0e+00 1312.0 1145 60.2
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 0.0e+00 1307.0 1149 59.4
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 0.0e+00 1305.8 1139 60.2
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1305.0 1139 59.6
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 0.0e+00 1304.3 1149 60.2
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1303.9 1142 59.7
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1303.1 1142 59.6
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1298.1 1155 58.7
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 0.0e+00 1293.9 1139 59.4
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 0.0e+00 1293.5 1141 59.5
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 0.0e+00 1293.5 1136 58.4
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1292.3 1144 58.9
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 0.0e+00 1290.4 1154 59.0
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1290.0 1134 59.3
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 0.0e+00 1285.0 1100 61.6
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 0.0e+00 1283.9 1132 59.4
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1282.3 1139 59.0
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 0.0e+00 1281.2 1182 58.5
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1276.9 1155 58.1
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 0.0e+00 1267.3 1145 59.4
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 0.0e+00 1261.1 1150 57.3
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 0.0e+00 1260.7 1149 58.3
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 0.0e+00 1255.0 1142 58.4
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1254.2 1142 58.4
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 0.0e+00 1251.9 1141 57.2
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 0.0e+00 1250.3 1146 58.2
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1248.4 1142 58.0
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 0.0e+00 1238.0 1142 58.1
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1234.2 1145 57.3
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 0.0e+00 1233.4 1143 58.1
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 0.0e+00 1223.0 1153 57.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1222.6 1143 58.1
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 0.0e+00 1220.3 1153 56.7
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 0.0e+00 1216.1 1090 58.4
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 0.0e+00 1215.3 1138 56.9
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 0.0e+00 1215.3 1153 56.5
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 0.0e+00 1214.9 1138 57.5
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1213.7 1149 56.6
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 0.0e+00 1208.7 1142 56.9
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 0.0e+00 1207.2 1149 55.4
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 0.0e+00 1203.7 1152 56.1
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 0.0e+00 1196.4 1144 56.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 0.0e+00 1196.0 1142 56.1
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1195.3 1144 56.7
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 0.0e+00 1194.9 1143 56.4
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 0.0e+00 1193.3 1151 57.3
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 0.0e+00 1192.2 1161 55.8
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 0.0e+00 1187.2 1156 55.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 0.0e+00 1182.5 1140 56.8
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 0.0e+00 1175.6 1151 54.4
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 0.0e+00 1173.7 1141 54.6
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 0.0e+00 1171.0 1177 54.2
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1156.4 1152 54.9
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 0.0e+00 1150.6 1034 58.4
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 0.0e+00 1149.0 1139 54.7
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 0.0e+00 1144.4 1149 53.6
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 0.0e+00 1140.2 1145 53.8
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 0.0e+00 1136.7 1154 52.1
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 0.0e+00 1127.5 1146 52.6
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 0.0e+00 1125.2 1151 51.8
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 0.0e+00 1124.4 1144 51.9
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 0.0e+00 1122.1 1159 53.8
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 0.0e+00 1120.9 1154 51.5
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 0.0e+00 1117.8 1145 52.2
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 0.0e+00 1112.1 1028 57.5
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 0.0e+00 1109.4 1158 52.2
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 0.0e+00 1109.4 1145 52.1
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1088.2 1144 50.7
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 0.0e+00 1085.5 1151 50.0
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 0.0e+00 1083.9 1144 50.4
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 0.0e+00 1079.7 1143 50.2
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1076.2 1143 50.1
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 2.8e-304 1048.9 1142 50.7
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 7.0e-303 1044.3 1116 51.3
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 9.1e-279 964.1 1164 47.8
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 2.1e-267 926.4 1137 45.8
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.2e-265 920.6 1131 46.7
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 1.9e-263 913.3 908 54.7
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 3.0e-261 906.0 1155 45.8
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.6e-259 900.2 768 60.2
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 1.9e-247 860.1 642 66.2
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 8.6e-245 851.3 651 65.7
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 9.0e-234 814.7 649 63.8
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 1.1e-228 797.7 1209 40.1
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 5.6e-220 768.8 565 70.3
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 2.0e-217 760.4 1164 41.5
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.7e-216 757.3 645 60.2
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 2.3e-213 746.9 1231 37.7
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 4.2e-207 726.1 646 57.7
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 2.2e-192 677.2 612 58.8
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 7.9e-190 668.7 520 67.9
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 1.5e-188 664.5 645 54.0
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 9.1e-186 655.2 565 60.9
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 4.0e-181 639.8 714 50.6
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 8.9e-149 532.3 467 60.8
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 7.0e-146 522.7 494 57.7
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 2.6e-132 477.6 485 54.8
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 7.9e-97 359.8 1596 25.1
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.2e-90 337.8 525 39.0
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 2.0e-76 292.0 740 33.8
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.2e-73 282.7 266 55.6
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 4.4e-71 274.2 546 34.4
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 2.2e-67 261.9 617 31.4
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-60 238.0 378 41.8
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 3.1e-53 214.9 492 31.3
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 2.9e-51 208.4 557 28.7
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 5.9e-44 184.1 519 29.7
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-42 179.5 226 46.5
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-40 172.6 671 25.6
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-40 172.6 671 25.6
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 3.2e-37 161.8 378 32.3
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-36 158.3 177 45.8
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-34 152.1 209 44.0
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-32 146.7 264 34.8
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-31 141.4 212 40.6
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 3.9e-27 128.3 139 46.8
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 8.6e-27 127.1 207 42.5
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-24 120.2 207 38.6
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-23 114.8 120 49.2
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.7e-22 112.8 124 45.2
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 4.9e-22 111.3 241 32.8
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-21 109.8 123 46.3
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 1.0e-19 103.6 79 62.0
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 9.9e-15 87.0 55 70.9
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 6.4e-14 84.3 52 75.0
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-13 82.8 247 28.3
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 1.9e-13 82.8 247 28.3
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 4.1e-13 81.6 84 47.6
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-08 64.7 151 33.1
Zm00001eb363670 Zea mays HOM05D026658 ORTHO05D051654 2.2e-06 59.3 102 38.2
SMO343G0003 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 4.9e-06 58.2 84 38.1


User provided reference genes

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