Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.5e-65 252.7 128 100.0
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 9.6e-60 233.4 127 92.1
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 1.4e-58 229.6 128 89.1
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 1.0e-45 186.8 122 74.6
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.3e-45 186.4 122 76.2
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.3e-45 186.4 118 77.1
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 2.3e-45 185.7 118 77.1
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 6.7e-45 184.1 121 76.9
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 6.7e-45 184.1 124 75.0
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 6.7e-45 184.1 119 76.5
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 8.7e-45 183.7 128 71.1
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 8.7e-45 183.7 127 71.7
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 2.5e-44 182.2 122 73.8
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 9.7e-44 180.3 119 74.8
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.3e-43 179.9 124 73.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.3e-43 179.9 124 73.4
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 1.6e-43 179.5 119 73.9
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 71.8
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.6e-43 179.5 124 68.5
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 2.8e-43 178.7 123 71.5
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 3.7e-43 178.3 124 70.2
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 3.7e-43 178.3 123 71.5
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 8.2e-43 177.2 118 74.6
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.1e-42 176.8 122 72.1
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 1.8e-42 176.0 117 73.5
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 3.1e-42 175.3 123 69.9
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 3.1e-42 175.3 118 71.2
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 4.1e-42 174.9 121 71.1
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 4.1e-42 174.9 128 67.2
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 9.0e-42 173.7 128 71.1
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.2e-41 173.3 124 69.4
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-41 173.3 121 70.2
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.5e-41 172.9 124 69.4
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 1.5e-41 172.9 119 71.4
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 2.0e-41 172.6 120 73.3
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 2.0e-41 172.6 124 70.2
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.0e-41 172.6 117 71.8
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 3.4e-41 171.8 119 72.3
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 3.4e-41 171.8 119 72.3
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 3.4e-41 171.8 119 72.3
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 3.4e-41 171.8 120 70.8
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-41 171.4 120 72.5
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 4.5e-41 171.4 120 72.5
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 4.5e-41 171.4 117 69.2
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 4.5e-41 171.4 117 69.2
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 5.9e-41 171.0 124 66.9
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 5.9e-41 171.0 122 72.1
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 7.7e-41 170.6 120 72.5
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 1.0e-40 170.2 124 70.2
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.7e-40 169.5 120 73.3
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.7e-40 169.5 119 71.4
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 2.2e-40 169.1 126 68.3
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.9e-40 168.7 119 71.4
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.9e-40 168.7 119 69.7
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 2.9e-40 168.7 127 66.1
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 3.8e-40 168.3 121 70.2
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 3.8e-40 168.3 122 68.0
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 5.0e-40 167.9 145 60.7
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 5.0e-40 167.9 116 69.8
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 8.5e-40 167.2 113 69.9
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.1e-39 166.8 119 70.6
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 1.4e-39 166.4 120 70.0
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.4e-39 166.4 124 67.7
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 2.5e-39 165.6 118 70.3
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 3.2e-39 165.2 119 70.6
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.2e-39 165.2 112 75.0
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 3.2e-39 165.2 119 70.6
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 3.2e-39 165.2 119 70.6
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 3.2e-39 165.2 122 68.9
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 3.2e-39 165.2 119 68.9
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 4.2e-39 164.9 122 67.2
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 5.5e-39 164.5 122 69.7
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.2e-38 163.3 143 60.1
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.2e-38 163.3 119 68.9
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 2.1e-38 162.5 119 69.7
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.7e-38 162.2 128 62.5
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 4.6e-38 161.4 117 69.2
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 7.9e-38 160.6 121 63.6
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.0e-37 160.2 141 61.7
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 1.0e-37 160.2 113 72.6
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.0e-37 160.2 122 64.8
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.8e-37 159.5 105 73.3
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.3e-37 159.1 105 74.3
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 3.0e-37 158.7 122 63.1
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 5.1e-37 157.9 118 66.9
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 5.1e-37 157.9 119 66.4
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.1e-36 156.8 122 63.1
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.5e-36 156.4 105 74.3
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 2.0e-36 156.0 118 68.6
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.5e-36 155.6 118 68.6
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 4.3e-36 154.8 101 77.2
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 9.7e-36 153.7 118 67.8
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 2.8e-35 152.1 123 63.4
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 2.8e-35 152.1 113 65.5
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 8.2e-35 150.6 130 61.5
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.1e-34 150.2 101 75.2
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.4e-34 149.8 106 70.8
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 1.4e-34 149.8 107 69.2
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 3.1e-34 148.7 113 66.4
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 3.1e-34 148.7 119 61.3
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.6e-33 145.6 135 59.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.6e-33 145.6 132 60.6
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 1.0e-32 143.7 113 61.1
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 8.5e-32 140.6 120 55.8
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 2.5e-31 139.0 118 58.5
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 7.2e-31 137.5 122 61.5
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 9.4e-31 137.1 100 64.0
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 7.9e-30 134.0 127 50.4
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 1.0e-29 133.7 214 40.2
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 8.8e-29 130.6 106 60.4
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.0e-28 129.4 107 64.5
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 3.7e-27 125.2 94 66.0
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 4.8e-27 124.8 112 60.7
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.8e-27 124.8 81 76.5
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 2.4e-26 122.5 88 68.2
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 6.5e-24 114.4 74 77.0
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 5.5e-23 111.3 68 77.9
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 3.6e-22 108.6 127 47.2
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.1e-20 103.6 67 67.2
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 7.4e-20 100.9 95 57.9
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.3e-19 100.1 67 70.1
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 6.3e-19 97.8 81 55.6
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 1.8e-18 96.3 89 60.7
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 5.3e-18 94.7 122 37.7
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.5e-15 85.9 70 62.9
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 3.6e-14 82.0 61 65.6
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 9.8e-12 73.9 46 71.7
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 1.4e-10 70.1 51 64.7
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 5.5e-07 58.2 117 33.3
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 2.7e-06 55.8 105 39.0


User provided reference genes

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