Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 1.0e-66 256.5 125 100.0
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 5.2e-18 94.7 112 42.9
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.3e-13 79.3 107 40.2
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 3.9e-13 78.6 106 36.8
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 5.1e-13 78.2 103 41.7
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 5.1e-13 78.2 107 42.1
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 6.6e-13 77.8 103 41.7
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 6.6e-13 77.8 106 39.6
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 6.6e-13 77.8 121 36.4
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 8.6e-13 77.4 106 39.6
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.1e-12 77.0 121 35.5
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 1.5e-12 76.6 104 37.5
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.9e-12 76.3 106 38.7
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 2.5e-12 75.9 107 39.3
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 3.3e-12 75.5 107 39.3
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 5.6e-12 74.7 107 37.4
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 1.2e-11 73.6 107 41.1
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 1.6e-11 73.2 106 40.6
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 3.6e-11 72.0 107 34.6
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 4.7e-11 71.6 110 38.2
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 6.2e-11 71.2 107 40.2
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.1e-10 70.5 102 38.2
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 1.1e-10 70.5 107 39.3
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.4e-10 70.1 121 37.2
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 1.4e-10 70.1 108 38.9
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 2.3e-10 69.3 107 40.2
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 5.2e-10 68.2 104 36.5
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 6.8e-10 67.8 109 40.4
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 6.8e-10 67.8 107 36.4
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 6.8e-10 67.8 109 39.4
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 8.9e-10 67.4 110 35.5
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.2e-09 67.0 107 36.4
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.2e-09 67.0 121 35.5
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.2e-09 67.0 121 35.5
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.5e-09 66.6 106 38.7
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.5e-09 66.6 129 34.1
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.6e-09 65.9 107 35.5
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 3.4e-09 65.5 109 38.5
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 5.8e-09 64.7 108 37.0
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 2.2e-08 62.8 109 41.3
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.2e-08 62.8 122 33.6
ECA233G4381 Erigeron canadensis HOM05D000896 ORTHO05D000594 2.2e-08 62.8 112 38.4
ClCG08G014520 Citrullus lanatus HOM05D000001 ORTHO05D009054 2.9e-08 62.4 117 37.6
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 3.7e-08 62.0 103 37.9
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 8.3e-08 60.8 107 35.5
CsaV3_5G027980 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.4e-07 60.1 117 34.2
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 1.4e-07 60.1 107 36.4
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.9e-07 59.7 107 35.5
CsaV3_5G028220 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.9e-07 59.7 115 34.8
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 3.2e-07 58.9 106 38.7
Ciclev10030162m.g Citrus clementina HOM05D000896 ORTHO05D000594 9.2e-07 57.4 113 34.5
Lsat_1_v5_gn_4_16540 Lactuca sativa HOM05D000896 ORTHO05D000594 9.2e-07 57.4 112 38.4
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.2e-06 57.0 105 34.3
MELO3C005283.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.2e-06 57.0 117 32.5
MELO3C005306.2 Cucumis melo HOM05D000896 ORTHO05D000594 1.2e-06 57.0 117 32.5
CsaV3_5G027950 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.2e-06 57.0 117 33.3
CsaV3_5G028440 Cucumis sativus L. HOM05D000896 ORTHO05D000594 1.6e-06 56.6 115 32.2
Lsat_1_v5_gn_4_16560 Lactuca sativa HOM05D000896 ORTHO05D000594 1.6e-06 56.6 113 38.9
ClCG01G006250 Citrullus lanatus HOM05D000896 ORTHO05D000594 3.5e-06 55.5 117 32.5
CsaV3_5G028430 Cucumis sativus L. HOM05D000896 ORTHO05D000594 3.5e-06 55.5 115 33.0
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 6.0e-06 54.7 112 34.8
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 6.0e-06 54.7 117 34.2
ECA232G1636 Erigeron canadensis HOM05D000084 ORTHO05D002355 6.0e-06 54.7 112 36.6
ECA233G6213 Erigeron canadensis HOM05D000896 ORTHO05D000594 6.0e-06 54.7 127 34.6


User provided reference genes

Program Settings