Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 1.4e-63 246.5 167 100.0
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 7.6e-57 224.2 167 91.0
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 4.2e-55 218.4 168 87.5
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 2.0e-17 93.2 103 58.3
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 2.6e-17 92.8 167 43.7
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.2e-16 89.7 87 64.4
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 3.8e-16 89.0 167 44.9
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 6.5e-16 88.2 94 57.4
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 1.1e-15 87.4 95 55.8
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 1.1e-15 87.4 90 61.1
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 1.9e-15 86.7 87 62.1
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 2.5e-15 86.3 96 57.3
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.2e-15 85.5 172 42.4
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 4.2e-15 85.5 113 53.1
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 5.5e-15 85.1 106 55.7
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 2.7e-14 82.8 167 44.9
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 3.6e-14 82.4 78 67.9
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 4.7e-14 82.0 101 53.5
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 8.0e-14 81.3 172 41.3
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 1.4e-13 80.5 95 56.8
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.8e-13 80.1 102 52.9
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 1.8e-13 80.1 102 52.9
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 4.0e-13 79.0 100 54.0
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 4.0e-13 79.0 100 54.0
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 4.0e-13 79.0 86 55.8
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 5.2e-13 78.6 92 53.3
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 5.2e-13 78.6 92 53.3
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 5.2e-13 78.6 77 58.4
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 5.2e-13 78.6 87 57.5
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 8.8e-13 77.8 79 59.5
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.6e-12 76.3 97 50.5
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 3.3e-12 75.9 92 52.2
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 3.3e-12 75.9 97 50.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 7.5e-12 74.7 84 56.0
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 1.7e-11 73.6 97 49.5
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 1.7e-11 73.6 89 53.9
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 2.2e-11 73.2 82 53.7
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 3.7e-11 72.4 79 55.7
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 4.8e-11 72.0 90 48.9
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 1.1e-10 70.9 93 51.6
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 1.1e-10 70.9 85 52.9
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 1.8e-10 70.1 79 57.0
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 2.4e-10 69.7 88 52.3
CsaV3_3G001850 Cucumis sativus L. HOM05D007324 ORTHO05D007884 3.1e-10 69.3 96 47.9
Nn6g33613 Nelumbo nucifera HOM05D007324 ORTHO05D007884 3.1e-10 69.3 80 57.5
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 5.3e-10 68.6 79 59.5
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 7.0e-10 68.2 64 65.6
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 2.0e-09 66.6 74 56.8
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 2.7e-09 66.2 88 52.3
FvH4_5g21830 Fragaria vesca HOM05D007324 ORTHO05D007884 5.9e-09 65.1 85 51.8
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 7.7e-09 64.7 79 58.2
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 1.0e-08 64.3 84 50.0
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 1.3e-08 63.9 79 55.7
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 1.3e-08 63.9 79 55.7
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 1.3e-08 63.9 109 43.1
FAN04G2965 Fragaria x ananassa HOM05D007324 ORTHO05D007884 1.3e-08 63.9 85 51.8
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 1.7e-08 63.5 79 55.7
CARHR129450 Cardamine hirsuta HOM05D011082 ORTHO05D007884 2.2e-08 63.2 86 51.2
FAN13G0501 Fragaria x ananassa HOM05D007324 ORTHO05D007884 2.2e-08 63.2 115 42.6
FAN18G2652 Fragaria x ananassa HOM05D007324 ORTHO05D007884 5.0e-08 62.0 85 50.6
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 8.5e-08 61.2 91 47.3
FvH4_5g21820 Fragaria vesca HOM05D031477 ORTHO05D007884 8.5e-08 61.2 71 53.5
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 1.9e-07 60.1 86 48.8
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 1.9e-07 60.1 52 71.2
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 2.5e-07 59.7 61 60.7
Thhalv10017485m.g Eutrema salsugineum HOM05D011082 ORTHO05D007884 2.5e-07 59.7 86 47.7
ClCG10G001740 Citrullus lanatus HOM05D007324 ORTHO05D007884 3.2e-07 59.3 73 54.8
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 4.2e-07 58.9 79 48.1
FAN08G0008 Fragaria x ananassa HOM05D007324 ORTHO05D007884 5.5e-07 58.5 85 48.2
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 5.5e-07 58.5 79 51.9
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 7.2e-07 58.2 93 46.2
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 2.1e-06 56.6 78 47.4
Ca_22071_v3 Cicer arietinum L. HOM05D007324 ORTHO05D007884 2.7e-06 56.2 74 51.4
Nn1g00547 Nelumbo nucifera HOM05D007324 ORTHO05D007884 2.7e-06 56.2 84 48.8
Nn1g00546 Nelumbo nucifera HOM05D007324 ORTHO05D007884 3.6e-06 55.8 85 47.1
SalBow1G4617 Salvia bowleyana HOM05D007324 ORTHO05D007884 3.6e-06 55.8 73 49.3
SalBow8G4924 Salvia bowleyana HOM05D007324 ORTHO05D007884 3.6e-06 55.8 73 49.3


User provided reference genes

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