Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 4.4e-221 771.2 438 100.0
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 2.1e-207 725.7 438 95.4
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 3.0e-153 545.8 309 93.2
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 4.0e-113 412.5 420 59.5
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.3e-111 407.5 418 58.9
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.0e-108 397.9 421 57.7
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 9.4e-107 391.3 417 58.0
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 7.7e-101 371.7 418 54.3
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.7e-100 370.5 418 54.1
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.5e-99 367.5 418 54.3
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.6e-98 364.0 419 55.4
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 4.7e-98 362.5 420 54.5
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.0e-97 361.3 430 53.5
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 2.0e-96 357.1 417 53.5
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 2.8e-95 353.2 421 54.6
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 2.4e-94 350.1 421 51.5
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 4.1e-94 349.4 419 54.4
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.2e-93 347.8 416 53.4
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.6e-93 347.4 419 53.2
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 2.7e-93 346.7 418 53.1
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.9e-92 342.8 419 51.6
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 4.3e-91 339.3 419 51.3
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 1.4e-89 334.3 420 51.4
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 1.8e-89 334.0 404 53.0
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.2e-88 331.3 419 51.1
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.5e-88 330.9 417 51.3
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.5e-88 330.9 421 50.1
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 2.0e-88 330.5 419 51.3
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 5.8e-88 328.9 419 49.4
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.7e-87 327.4 419 49.6
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 2.2e-87 327.0 360 56.7
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 2.2e-87 327.0 419 51.8
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.9e-87 326.6 420 50.2
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 6.4e-87 325.5 419 50.4
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 5.4e-86 322.4 419 49.4
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 7.0e-86 322.0 417 51.1
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 7.8e-85 318.5 413 50.6
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.5e-83 313.5 445 50.3
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 7.3e-83 312.0 419 48.9
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 7.3e-83 312.0 389 51.7
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 2.1e-82 310.5 460 46.5
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 6.2e-82 308.9 499 43.5
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.3e-81 307.0 416 49.5
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 3.1e-81 306.6 423 48.9
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 8.9e-81 305.1 422 49.1
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.7e-79 300.8 479 43.2
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.7e-79 299.7 479 43.0
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 6.4e-79 298.9 420 48.6
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-78 298.1 480 43.3
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 9.2e-78 295.0 417 48.2
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 2.7e-77 293.5 436 46.6
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 2.7e-77 293.5 419 47.5
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 3.9e-76 289.7 421 47.0
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.1e-75 288.1 423 45.9
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 1.5e-75 287.7 421 46.8
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 1.9e-75 287.3 418 48.8
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 4.7e-74 282.7 411 46.7
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.4e-73 281.2 402 47.3
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.8e-73 280.8 426 44.8
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.3e-73 280.4 421 46.3
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 3.1e-73 280.0 408 47.1
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 2.0e-72 277.3 414 46.6
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 5.8e-72 275.8 420 46.0
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.3e-71 274.6 421 46.3
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.6e-69 267.7 421 45.8
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 2.3e-68 263.8 423 44.7
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 2.3e-68 263.8 423 44.7
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 2.3e-68 263.8 376 48.1
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 3.0e-68 263.5 425 44.7
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 8.6e-68 261.9 415 42.4
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.3e-67 260.0 422 45.3
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 1.6e-66 257.7 414 43.7
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.6e-66 257.7 413 44.6
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 2.8e-66 256.9 425 44.0
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.4e-65 254.6 404 43.1
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 6.8e-65 252.3 427 45.9
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 2.6e-64 250.4 368 47.6
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 4.9e-55 219.5 365 42.7
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 4.9e-47 193.0 314 43.6
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 3.0e-36 157.1 320 39.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 5.7e-35 152.9 316 36.1
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.8e-28 131.3 311 35.0
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 6.7e-28 129.4 222 39.2
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 6.9e-25 119.4 173 45.7
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 4.5e-24 116.7 80 75.0
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.3e-23 115.2 238 37.4
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.2e-23 114.4 166 45.8
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.8e-23 113.6 76 78.9
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 5.7e-19 99.8 159 45.9
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 2.6e-16 90.9 382 29.6
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.9e-15 87.4 53 86.8
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.3e-10 69.7 44 79.5
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 8.2e-10 69.3 91 52.7
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 8.2e-10 69.3 40 85.0
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.4e-09 68.6 81 48.1
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 3.8e-07 60.5 61 57.4
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.8e-07 60.5 61 57.4
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.1e-06 58.9 67 47.8


User provided reference genes

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